RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 ARMC2Q8NEN0 867 aa17.58■□□□□ 0.4
PHGDH-232ENST00000641947 ZNF641Q96N77 438 aaPredicted RBP17.58■□□□□ 0.4
PHGDH-232ENST00000641947 MCCC1Q96RQ3 725 aaPredicted RBP17.58■□□□□ 0.4
PHGDH-232ENST00000641947 C1QTNF1Q9BXJ1 281 aa17.58■□□□□ 0.4
PHGDH-232ENST00000641947 GPR63Q9BZJ6 419 aa17.58■□□□□ 0.4
PHGDH-232ENST00000641947 FAM96AQ9H5X1 160 aa17.58■□□□□ 0.4
PHGDH-232ENST00000641947 ZDHHC4Q9NPG8 344 aa17.58■□□□□ 0.4
PHGDH-232ENST00000641947 PPIL1Q9Y3C6 166 aa17.58■□□□□ 0.4
PHGDH-232ENST00000641947 CKAP5Q14008 2032 aa17.58■□□□□ 0.4
PHGDH-232ENST00000641947 H3BQ06 376 aaPredicted RBP17.57■□□□□ 0.4
PHGDH-232ENST00000641947 H7C0S8 307 aa17.57■□□□□ 0.4
PHGDH-232ENST00000641947 LHCGRP22888 699 aa17.57■□□□□ 0.4
PHGDH-232ENST00000641947 MC4RP32245 332 aa17.57■□□□□ 0.4
PHGDH-232ENST00000641947 SOX9P48436 509 aa17.57■□□□□ 0.4
PHGDH-232ENST00000641947 CCT5P48643 541 aa17.57■□□□□ 0.4
PHGDH-232ENST00000641947 STC1P52823 247 aa17.57■□□□□ 0.4
PHGDH-232ENST00000641947 HTR4Q13639 388 aa17.57■□□□□ 0.4
PHGDH-232ENST00000641947 ARSIQ5FYB1 569 aa17.57■□□□□ 0.4
PHGDH-232ENST00000641947 N4BP2L1Q5TBK1 243 aaPredicted RBP17.57■□□□□ 0.4
PHGDH-232ENST00000641947 CRTC1Q6UUV9 634 aa17.57■□□□□ 0.4
PHGDH-232ENST00000641947 LMNTD2Q8IXW0 634 aa17.57■□□□□ 0.4
PHGDH-232ENST00000641947 PAF1Q8N7H5 531 aa17.57■□□□□ 0.4
PHGDH-232ENST00000641947 ZNF473Q8WTR7 871 aaKnown RBP17.57■□□□□ 0.4
PHGDH-232ENST00000641947 ELMO2Q96JJ3 720 aa17.57■□□□□ 0.4
PHGDH-232ENST00000641947 LYSMD1Q96S90 227 aa17.57■□□□□ 0.4
PHGDH-232ENST00000641947 HEPHQ9BQS7 1158 aa17.57■□□□□ 0.4
PHGDH-232ENST00000641947 MECRQ9BV79 373 aa17.57■□□□□ 0.4
PHGDH-232ENST00000641947 IQCGQ9H095 443 aaKnown RBP17.57■□□□□ 0.4
PHGDH-232ENST00000641947 ZFYVE1Q9HBF4 777 aa17.57■□□□□ 0.4
PHGDH-232ENST00000641947 FBRSL1Q9HCM7 1045 aaKnown RBP17.57■□□□□ 0.4
PHGDH-232ENST00000641947 TMEM216Q9P0N5 145 aa17.57■□□□□ 0.4
PHGDH-232ENST00000641947 PHTF1Q9UMS5 762 aa17.57■□□□□ 0.4
PHGDH-232ENST00000641947 TRIOO75962 3097 aa17.57■□□□□ 0.4
PHGDH-232ENST00000641947 PIKFYVEQ9Y2I7 2098 aa17.57■□□□□ 0.4
PHGDH-232ENST00000641947 GLRA3O75311 464 aa17.56■□□□□ 0.4
PHGDH-232ENST00000641947 FAM107AO95990 144 aa17.56■□□□□ 0.4
PHGDH-232ENST00000641947 MPOP05164 745 aa17.56■□□□□ 0.4
PHGDH-232ENST00000641947 OGNP20774 298 aaKnown RBP17.56■□□□□ 0.4
PHGDH-232ENST00000641947 NNMTP40261 264 aa17.56■□□□□ 0.4
PHGDH-232ENST00000641947 RECQLP46063 649 aaPredicted RBP17.56■□□□□ 0.4
PHGDH-232ENST00000641947 SERPINB4P48594 390 aa17.56■□□□□ 0.4
PHGDH-232ENST00000641947 TIAL1Q01085 375 aaKnown RBP eCLIP17.56■□□□□ 0.4
PHGDH-232ENST00000641947 RAD51Q06609 339 aa17.56■□□□□ 0.4
PHGDH-232ENST00000641947 FOXR1Q6PIV2 292 aa17.56■□□□□ 0.4
PHGDH-232ENST00000641947 SCRN2Q96FV2 425 aa17.56■□□□□ 0.4
PHGDH-232ENST00000641947 EPS15L1Q9UBC2 864 aa17.56■□□□□ 0.4
PHGDH-232ENST00000641947 CRYL1Q9Y2S2 319 aa17.56■□□□□ 0.4
PHGDH-232ENST00000641947 GRXCR2A6NFK2 248 aa17.56■□□□□ 0.4
PHGDH-232ENST00000641947 DNAJC6O75061 913 aa17.56■□□□□ 0.4
PHGDH-232ENST00000641947 HADHAP40939 763 aa17.56■□□□□ 0.4
PHGDH-232ENST00000641947 CLCN5P51795 746 aa17.56■□□□□ 0.4
PHGDH-232ENST00000641947 METAP1P53582 386 aa17.56■□□□□ 0.4
PHGDH-232ENST00000641947 IRX4P78413 519 aa17.56■□□□□ 0.4
PHGDH-232ENST00000641947 DLG1Q12959 904 aa17.56■□□□□ 0.4
PHGDH-232ENST00000641947 ZNF234Q14588 700 aa17.56■□□□□ 0.4
PHGDH-232ENST00000641947 SEPT7Q16181 437 aaKnown RBP17.56■□□□□ 0.4
PHGDH-232ENST00000641947 FNDC3BQ53EP0 1204 aaKnown RBP17.56■□□□□ 0.4
PHGDH-232ENST00000641947 CES4AQ5XG92 561 aa17.56■□□□□ 0.4
PHGDH-232ENST00000641947 MRNIPQ6NTE8 343 aa17.56■□□□□ 0.4
PHGDH-232ENST00000641947 CENPLQ8N0S6 344 aaPredicted RBP17.56■□□□□ 0.4
PHGDH-232ENST00000641947 CCDC97Q96F63 343 aaPredicted RBP17.56■□□□□ 0.4
PHGDH-232ENST00000641947 TRMT61BQ9BVS5 477 aaKnown RBP17.56■□□□□ 0.4
PHGDH-232ENST00000641947 BRD9Q9H8M2 597 aa17.56■□□□□ 0.4
PHGDH-232ENST00000641947 FGFR1OP2Q9NVK5 253 aa17.56■□□□□ 0.4
PHGDH-232ENST00000641947 IL36AQ9UHA7 158 aa17.56■□□□□ 0.4
PHGDH-232ENST00000641947 MYO10Q9HD67 2058 aa17.55■□□□□ 0.4
PHGDH-232ENST00000641947 TMEM265A0A087WTH1 108 aa17.55■□□□□ 0.4
PHGDH-232ENST00000641947 TSPAN11A1L157 253 aa17.55■□□□□ 0.4
PHGDH-232ENST00000641947 ANHXE9PGG2 379 aa17.55■□□□□ 0.4
PHGDH-232ENST00000641947 NDUFAB1O14561 156 aa17.55■□□□□ 0.4
PHGDH-232ENST00000641947 PLIN3O60664 434 aa17.55■□□□□ 0.4
PHGDH-232ENST00000641947 PROCP04070 461 aa17.55■□□□□ 0.4
PHGDH-232ENST00000641947 VIMP08670 466 aaKnown RBP17.55■□□□□ 0.4
PHGDH-232ENST00000641947 BPIP17213 487 aa17.55■□□□□ 0.4
PHGDH-232ENST00000641947 CDKN2DP55273 166 aa17.55■□□□□ 0.4
PHGDH-232ENST00000641947 RAB10P61026 200 aa17.55■□□□□ 0.4
PHGDH-232ENST00000641947 ST8SIA6P61647 398 aa17.55■□□□□ 0.4
PHGDH-232ENST00000641947 EIF4HQ15056 248 aaKnown RBP17.55■□□□□ 0.4
PHGDH-232ENST00000641947 ITPRIPL2Q3MIP1 535 aa17.55■□□□□ 0.4
PHGDH-232ENST00000641947 POM121L1PQ3SYA9 428 aa17.55■□□□□ 0.4
PHGDH-232ENST00000641947 FASTKD1Q53R41 847 aaKnown RBP17.55■□□□□ 0.4
PHGDH-232ENST00000641947 HECTD2Q5U5R9 776 aa17.55■□□□□ 0.4
PHGDH-232ENST00000641947 LRRC66Q68CR7 880 aa17.55■□□□□ 0.4
PHGDH-232ENST00000641947 CGB2Q6NT52 195 aa17.55■□□□□ 0.4
PHGDH-232ENST00000641947 RGS9BPQ6ZS82 235 aa17.55■□□□□ 0.4
PHGDH-232ENST00000641947 RFLNAQ6ZTI6 216 aa17.55■□□□□ 0.4
PHGDH-232ENST00000641947 LPGAT1Q92604 370 aa17.55■□□□□ 0.4
PHGDH-232ENST00000641947 ZNF75CPQ92670 426 aaPredicted RBP17.55■□□□□ 0.4
PHGDH-232ENST00000641947 ACOX2Q99424 681 aa17.55■□□□□ 0.4
PHGDH-232ENST00000641947 TMEM245Q9H330 911 aa17.55■□□□□ 0.4
PHGDH-232ENST00000641947 SLCO1B3Q9NPD5 702 aa17.55■□□□□ 0.4
PHGDH-232ENST00000641947 B4GALT6Q9UBX8 382 aa17.55■□□□□ 0.4
PHGDH-232ENST00000641947 DCDC2Q9UHG0 476 aa17.55■□□□□ 0.4
PHGDH-232ENST00000641947 CD207Q9UJ71 328 aa17.55■□□□□ 0.4
PHGDH-232ENST00000641947 SARDHQ9UL12 918 aa17.55■□□□□ 0.4
PHGDH-232ENST00000641947 PLA2G4CQ9UP65 541 aa17.55■□□□□ 0.4
PHGDH-232ENST00000641947 PKP3Q9Y446 797 aa17.55■□□□□ 0.4
PHGDH-232ENST00000641947 KAT7O95251 611 aa17.54■□□□□ 0.4
PHGDH-232ENST00000641947 WISP3O95389 354 aaPredicted RBP17.54■□□□□ 0.4
PHGDH-232ENST00000641947 POU4F1Q01851 419 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms