RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 WNT6Q9Y6F9 365 aa17.27■□□□□ 0.35
PHGDH-208ENST00000641023 ATP5BP06576 529 aaKnown RBP17.26■□□□□ 0.35
PHGDH-208ENST00000641023 CTPS1P17812 591 aa17.26■□□□□ 0.35
PHGDH-208ENST00000641023 GKP32189 559 aa17.26■□□□□ 0.35
PHGDH-208ENST00000641023 ECT2LQ008S8 904 aa17.26■□□□□ 0.35
PHGDH-208ENST00000641023 ASTLQ6HA08 431 aaPredicted RBP17.26■□□□□ 0.35
PHGDH-208ENST00000641023 ZNF549Q6P9A3 640 aa17.26■□□□□ 0.35
PHGDH-208ENST00000641023 NAPRTQ6XQN6 538 aa17.26■□□□□ 0.35
PHGDH-208ENST00000641023 CLNKQ7Z7G1 428 aa17.26■□□□□ 0.35
PHGDH-208ENST00000641023 TUBGCP5Q96RT8 1024 aa17.26■□□□□ 0.35
PHGDH-208ENST00000641023 GATA5Q9BWX5 397 aaPredicted RBP17.26■□□□□ 0.35
PHGDH-208ENST00000641023 SLC2A11Q9BYW1 496 aa17.26■□□□□ 0.35
PHGDH-208ENST00000641023 UNKQ9C0B0 810 aaKnown RBP17.26■□□□□ 0.35
PHGDH-208ENST00000641023 STN1Q9H668 368 aaKnown RBP17.26■□□□□ 0.35
PHGDH-208ENST00000641023 CERS4Q9HA82 394 aa17.26■□□□□ 0.35
PHGDH-208ENST00000641023 ZFYVE1Q9HBF4 777 aa17.26■□□□□ 0.35
PHGDH-208ENST00000641023 NOTCH4Q99466 2003 aa17.26■□□□□ 0.35
PHGDH-208ENST00000641023 ALPIP09923 528 aa17.25■□□□□ 0.35
PHGDH-208ENST00000641023 RAD51Q06609 339 aa17.25■□□□□ 0.35
PHGDH-208ENST00000641023 PTPRRQ15256 657 aa17.25■□□□□ 0.35
PHGDH-208ENST00000641023 MYLK3Q32MK0 819 aa17.25■□□□□ 0.35
PHGDH-208ENST00000641023 ZRANB3Q5FWF4 1079 aa17.25■□□□□ 0.35
PHGDH-208ENST00000641023 C22orf39Q6P5X5 142 aa17.25■□□□□ 0.35
PHGDH-208ENST00000641023 PCDH20Q8N6Y1 951 aaKnown RBP17.25■□□□□ 0.35
PHGDH-208ENST00000641023 ITFG1Q8TB96 612 aa17.25■□□□□ 0.35
PHGDH-208ENST00000641023 SKA1Q96BD8 255 aa17.25■□□□□ 0.35
PHGDH-208ENST00000641023 CCDC126Q96EE4 140 aa17.25■□□□□ 0.35
PHGDH-208ENST00000641023 C19orf43Q9BQ61 176 aa17.25■□□□□ 0.35
PHGDH-208ENST00000641023 AARSD1Q9BTE6 412 aaKnown RBP17.25■□□□□ 0.35
PHGDH-208ENST00000641023 YBX2Q9Y2T7 364 aaKnown RBP17.25■□□□□ 0.35
PHGDH-208ENST00000641023 DLX3O60479 287 aa17.25■□□□□ 0.35
PHGDH-208ENST00000641023 SRP72O76094 671 aaKnown RBP17.25■□□□□ 0.35
PHGDH-208ENST00000641023 PRSS56P0CW18 603 aa17.25■□□□□ 0.35
PHGDH-208ENST00000641023 PDAP1Q13442 181 aaKnown RBP17.25■□□□□ 0.35
PHGDH-208ENST00000641023 PEX6Q13608 980 aa17.25■□□□□ 0.35
PHGDH-208ENST00000641023 TMC5Q6UXY8 1006 aa17.25■□□□□ 0.35
PHGDH-208ENST00000641023 LYSMD3Q7Z3D4 306 aa17.25■□□□□ 0.35
PHGDH-208ENST00000641023 AHI1Q8N157 1196 aa17.25■□□□□ 0.35
PHGDH-208ENST00000641023 LPGAT1Q92604 370 aa17.25■□□□□ 0.35
PHGDH-208ENST00000641023 RILPQ96NA2 401 aa17.25■□□□□ 0.35
PHGDH-208ENST00000641023 TUBB6Q9BUF5 446 aa17.25■□□□□ 0.35
PHGDH-208ENST00000641023 DRC3Q9H069 523 aa17.25■□□□□ 0.35
PHGDH-208ENST00000641023 SYTL2Q9HCH5 934 aa17.25■□□□□ 0.35
PHGDH-208ENST00000641023 SAR1AQ9NR31 198 aa17.25■□□□□ 0.35
PHGDH-208ENST00000641023 TAS2R13Q9NYV9 303 aa17.25■□□□□ 0.35
PHGDH-208ENST00000641023 SLC30A1Q9Y6M5 507 aa17.25■□□□□ 0.35
PHGDH-208ENST00000641023 BNIP3LO60238 219 aa17.24■□□□□ 0.35
PHGDH-208ENST00000641023 WISP3O95389 354 aaPredicted RBP17.24■□□□□ 0.35
PHGDH-208ENST00000641023 ATP5F1P24539 256 aaPredicted RBP17.24■□□□□ 0.35
PHGDH-208ENST00000641023 ARRB2P32121 409 aa17.24■□□□□ 0.35
PHGDH-208ENST00000641023 NRIP1P48552 1158 aa17.24■□□□□ 0.35
PHGDH-208ENST00000641023 SUOXP51687 545 aa17.24■□□□□ 0.35
PHGDH-208ENST00000641023 NAGLUP54802 743 aa17.24■□□□□ 0.35
PHGDH-208ENST00000641023 NCALDP61601 193 aa17.24■□□□□ 0.35
PHGDH-208ENST00000641023 CARD16Q5EG05 197 aa17.24■□□□□ 0.35
PHGDH-208ENST00000641023 TECRLQ5HYJ1 363 aa17.24■□□□□ 0.35
PHGDH-208ENST00000641023 PSAPL1Q6NUJ1 521 aa17.24■□□□□ 0.35
PHGDH-208ENST00000641023 C12orf76Q8N812 135 aaPredicted RBP17.24■□□□□ 0.35
PHGDH-208ENST00000641023 KIAA1958Q8N8K9 716 aa17.24■□□□□ 0.35
PHGDH-208ENST00000641023 ANKRD49Q8WVL7 239 aa17.24■□□□□ 0.35
PHGDH-208ENST00000641023 KLHL29Q96CT2 875 aa17.24■□□□□ 0.35
PHGDH-208ENST00000641023 CPEB1Q9BZB8 566 aaKnown RBP17.24■□□□□ 0.35
PHGDH-208ENST00000641023 ILKAPQ9H0C8 392 aaPredicted RBP17.24■□□□□ 0.35
PHGDH-208ENST00000641023 NCKIPSDQ9NZQ3 722 aa17.24■□□□□ 0.35
PHGDH-208ENST00000641023 FNDC3AQ9Y2H6 1198 aaKnown RBP17.24■□□□□ 0.35
PHGDH-208ENST00000641023 C1orf232A0A0U1RR37 186 aa17.24■□□□□ 0.35
PHGDH-208ENST00000641023 CFAP73A6NFT4 308 aa17.24■□□□□ 0.35
PHGDH-208ENST00000641023 POP4O95707 220 aaKnown RBP17.24■□□□□ 0.35
PHGDH-208ENST00000641023 POLR2EP19388 210 aaKnown RBP17.24■□□□□ 0.35
PHGDH-208ENST00000641023 WEE1P30291 646 aa17.24■□□□□ 0.35
PHGDH-208ENST00000641023 FMO4P31512 558 aa17.24■□□□□ 0.35
PHGDH-208ENST00000641023 RASSF2P50749 326 aa17.24■□□□□ 0.35
PHGDH-208ENST00000641023 DUSP6Q16828 381 aa17.24■□□□□ 0.35
PHGDH-208ENST00000641023 TMEM207Q6UWW9 146 aa17.24■□□□□ 0.35
PHGDH-208ENST00000641023 ATG14Q6ZNE5 492 aa17.24■□□□□ 0.35
PHGDH-208ENST00000641023 ADIPOR2Q86V24 386 aa17.24■□□□□ 0.35
PHGDH-208ENST00000641023 PIM3Q86V86 326 aa17.24■□□□□ 0.35
PHGDH-208ENST00000641023 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.24■□□□□ 0.352e-7■■■■■ 60.5
PHGDH-208ENST00000641023 EID2BQ96D98 161 aa17.24■□□□□ 0.35
PHGDH-208ENST00000641023 LMAN2LQ9H0V9 348 aa17.24■□□□□ 0.35
PHGDH-208ENST00000641023 SUV39H2Q9H5I1 410 aa17.24■□□□□ 0.35
PHGDH-208ENST00000641023 PNPOQ9NVS9 261 aa17.24■□□□□ 0.35
PHGDH-208ENST00000641023 CDH23Q9H251 3354 aa17.23■□□□□ 0.35
PHGDH-208ENST00000641023 A0A0U1RQS6 177 aa17.23■□□□□ 0.35
PHGDH-208ENST00000641023 CCDC22O60826 627 aa17.23■□□□□ 0.35
PHGDH-208ENST00000641023 RHOBTB1O94844 696 aa17.23■□□□□ 0.35
PHGDH-208ENST00000641023 ZNF37AP17032 561 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-208ENST00000641023 HNF1BP35680 557 aa17.23■□□□□ 0.35
PHGDH-208ENST00000641023 PPARGP37231 505 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-208ENST00000641023 NNMTP40261 264 aa17.23■□□□□ 0.35
PHGDH-208ENST00000641023 MAGEA10P43363 369 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-208ENST00000641023 CDKN1CP49918 316 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-208ENST00000641023 CCNHP51946 323 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-208ENST00000641023 XIAPP98170 497 aa17.23■□□□□ 0.35
PHGDH-208ENST00000641023 CACNG1Q06432 222 aa17.23■□□□□ 0.35
PHGDH-208ENST00000641023 HSF5Q4G112 596 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-208ENST00000641023 PIANPQ8IYJ0 282 aa17.23■□□□□ 0.35
PHGDH-208ENST00000641023 STK40Q8N2I9 435 aa17.23■□□□□ 0.35
PHGDH-208ENST00000641023 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.23■□□□□ 0.35
PHGDH-208ENST00000641023 ZNF781Q8N8C0 355 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms