RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 CCDC28BQ9BUN5 200 aa17.56■□□□□ 0.4
SCARB2-223ENST00000640640 KLHL28Q9NXS3 571 aa17.56■□□□□ 0.4
SCARB2-223ENST00000640640 KCNE2Q9Y6J6 123 aa17.56■□□□□ 0.4
SCARB2-223ENST00000640640 A0A0J9YYE9 177 aa17.56■□□□□ 0.4
SCARB2-223ENST00000640640 NEDD8-MDP1E9PL57 170 aa17.56■□□□□ 0.4
SCARB2-223ENST00000640640 ABRQ12979 859 aa17.56■□□□□ 0.4
SCARB2-223ENST00000640640 BNIP2Q12982 314 aa17.56■□□□□ 0.4
SCARB2-223ENST00000640640 NEDD8Q15843 81 aa17.56■□□□□ 0.4
SCARB2-223ENST00000640640 AMIGO2Q86SJ2 522 aa17.56■□□□□ 0.4
SCARB2-223ENST00000640640 GPR180Q86V85 440 aa17.56■□□□□ 0.4
SCARB2-223ENST00000640640 REM2Q8IYK8 340 aaPredicted RBP17.56■□□□□ 0.4
SCARB2-223ENST00000640640 DCAKDQ8WVC6 231 aa17.56■□□□□ 0.4
SCARB2-223ENST00000640640 C19orf60Q96EN9 201 aa17.56■□□□□ 0.4
SCARB2-223ENST00000640640 SUSD3Q96L08 255 aa17.56■□□□□ 0.4
SCARB2-223ENST00000640640 DENND2DQ9H6A0 471 aaPredicted RBP17.56■□□□□ 0.4
SCARB2-223ENST00000640640 A0A087WXM4 84 aa17.56■□□□□ 0.4
SCARB2-223ENST00000640640 NPEPPSL1A6NEC2 478 aa17.56■□□□□ 0.4
SCARB2-223ENST00000640640 SLC28A1O00337 649 aa17.56■□□□□ 0.4
SCARB2-223ENST00000640640 SLC22A3O75751 556 aa17.56■□□□□ 0.4
SCARB2-223ENST00000640640 GSSP48637 474 aa17.56■□□□□ 0.4
SCARB2-223ENST00000640640 ACAP2Q15057 778 aa17.56■□□□□ 0.4
SCARB2-223ENST00000640640 MSS51Q4VC12 460 aa17.56■□□□□ 0.4
SCARB2-223ENST00000640640 TMCO5AQ8N6Q1 288 aa17.56■□□□□ 0.4
SCARB2-223ENST00000640640 EPS8L2Q9H6S3 715 aa17.56■□□□□ 0.4
SCARB2-223ENST00000640640 VRTNQ9H8Y1 702 aa17.56■□□□□ 0.4
SCARB2-223ENST00000640640 IRS2Q9Y4H2 1338 aa17.55■□□□□ 0.4
SCARB2-223ENST00000640640 UBR2Q8IWV8 1755 aa17.55■□□□□ 0.4
SCARB2-223ENST00000640640 GLYATL1P3A0A0U1RQE8 302 aa17.55■□□□□ 0.4
SCARB2-223ENST00000640640 PTGES3LE9PB15 166 aa17.55■□□□□ 0.4
SCARB2-223ENST00000640640 NEK2P51955 445 aa17.55■□□□□ 0.4
SCARB2-223ENST00000640640 GPX6P59796 221 aa17.55■□□□□ 0.4
SCARB2-223ENST00000640640 ZNF460Q14592 562 aa17.55■□□□□ 0.4
SCARB2-223ENST00000640640 UNC5BQ8IZJ1 945 aa17.55■□□□□ 0.4
SCARB2-223ENST00000640640 SETD9Q8NE22 299 aa17.55■□□□□ 0.4
SCARB2-223ENST00000640640 BRSK1Q8TDC3 778 aa17.55■□□□□ 0.4
SCARB2-223ENST00000640640 STRA6Q9BX79 667 aa17.55■□□□□ 0.4
SCARB2-223ENST00000640640 OSBPL2Q9H1P3 480 aa17.55■□□□□ 0.4
SCARB2-223ENST00000640640 CXorf49A8MYA2 514 aaPredicted RBP17.55■□□□□ 0.4
SCARB2-223ENST00000640640 C1QTNF3-AMACRE9PGA6 284 aa17.55■□□□□ 0.4
SCARB2-223ENST00000640640 EFCAB14O75071 495 aa17.55■□□□□ 0.4
SCARB2-223ENST00000640640 ZNF132P52740 706 aa17.55■□□□□ 0.4
SCARB2-223ENST00000640640 EMID1Q96A84 441 aaPredicted RBP17.55■□□□□ 0.4
SCARB2-223ENST00000640640 TADA1Q96BN2 335 aa17.55■□□□□ 0.4
SCARB2-223ENST00000640640 ZMAT2Q96NC0 199 aaKnown RBP17.55■□□□□ 0.4
SCARB2-223ENST00000640640 BBS4Q96RK4 519 aa17.55■□□□□ 0.4
SCARB2-223ENST00000640640 TLR6Q9Y2C9 796 aa17.55■□□□□ 0.4
SCARB2-223ENST00000640640 TEX264Q9Y6I9 313 aa17.55■□□□□ 0.4
SCARB2-223ENST00000640640 DHRS12A0PJE2 317 aa17.55■□□□□ 0.4
SCARB2-223ENST00000640640 NRP1O14786 923 aa17.55■□□□□ 0.4
SCARB2-223ENST00000640640 TLL1O43897 1013 aa17.55■□□□□ 0.4
SCARB2-223ENST00000640640 HCAR3P49019 387 aa17.55■□□□□ 0.4
SCARB2-223ENST00000640640 SULT2A1Q06520 285 aa17.55■□□□□ 0.4
SCARB2-223ENST00000640640 XKR6Q5GH73 641 aa17.55■□□□□ 0.4
SCARB2-223ENST00000640640 B3GNT9Q6UX72 402 aa17.55■□□□□ 0.4
SCARB2-223ENST00000640640 HEXDCQ8WVB3 486 aa17.55■□□□□ 0.4
SCARB2-223ENST00000640640 UBE2E3Q969T4 207 aa17.55■□□□□ 0.4
SCARB2-223ENST00000640640 CCDC3Q9BQI4 270 aa17.55■□□□□ 0.4
SCARB2-223ENST00000640640 C1QTNF7Q9BXJ2 289 aa17.55■□□□□ 0.4
SCARB2-223ENST00000640640 ATAD3AQ9NVI7 634 aa17.55■□□□□ 0.4
SCARB2-223ENST00000640640 SLC17A6Q9P2U8 582 aa17.55■□□□□ 0.4
SCARB2-223ENST00000640640 TIMM22Q9Y584 194 aa17.55■□□□□ 0.4
SCARB2-223ENST00000640640 FAM220BPB1ANY3 271 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 H0YGN5 161 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 GOT2P00505 430 aaKnown RBP17.54■□□□□ 0.4
SCARB2-223ENST00000640640 PSMB9P28065 219 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 PCYT1AP49585 367 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 TAPT1Q6NXT6 567 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 CLVS1Q8IUQ0 354 aaPredicted RBP17.54■□□□□ 0.4
SCARB2-223ENST00000640640 DDHD1Q8NEL9 900 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 PEBP4Q96S96 227 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 NPY6RQ99463 290 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 RIBC2Q9H4K1 309 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 BRD9Q9H8M2 597 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 NFS1Q9Y697 457 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 MYH7P12883 1935 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 SLC38A8A6NNN8 435 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 SLC20A2Q08357 652 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 PLPP4Q5VZY2 271 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 PQLC1Q8N2U9 271 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 AADATQ8N5Z0 425 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 ZNF317Q96PQ6 595 aaPredicted RBP17.54■□□□□ 0.4
SCARB2-223ENST00000640640 APOL4Q9BPW4 351 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 REEP1Q9H902 201 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 DDX28Q9NUL7 540 aaKnown RBP17.54■□□□□ 0.4
SCARB2-223ENST00000640640 ZNF358Q9NW07 568 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 CACNA2D2Q9NY47 1150 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 RGS5O15539 181 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 SGTAO43765 313 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 ELFN1P0C7U0 828 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 CHN2P52757 468 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 DEFA1P59665 94 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 DEFA3P59666 94 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 KLF1Q13351 362 aaPredicted RBP17.54■□□□□ 0.4
SCARB2-223ENST00000640640 FBXO48Q5FWF7 155 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 CLEC6AQ6EIG7 209 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 ZNF549Q6P9A3 640 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 OTOP2Q7RTS6 562 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 DSELQ8IZU8 1212 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 ARL14EPQ8N8R7 260 aaPredicted RBP17.54■□□□□ 0.4
SCARB2-223ENST00000640640 TERB1Q8NA31 727 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms