RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 CLEC18AA5D8T8 446 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 PABPN1LA6NDY0 278 aaKnown RBP3.3□□□□□ -1.88
ATM-230ENST00000640388 ATP2C2O75185 946 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 CELF2O95319 508 aaKnown RBP3.3□□□□□ -1.88
ATM-230ENST00000640388 CBSLP0DN79 551 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 TGFB3P10600 412 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 TFPIP10646 304 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 FOSL2P15408 326 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 TTKP33981 857 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 CBSP35520 551 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 CCR5P51681 352 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 CYP4A11Q02928 519 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 FAM27E3Q08E93 113 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 TRAF2Q12933 501 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 CTTNQ14247 550 aaKnown RBP3.3□□□□□ -1.88
ATM-230ENST00000640388 ZRSR2Q15696 482 aaKnown RBP3.3□□□□□ -1.88
ATM-230ENST00000640388 ASIC2Q16515 512 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 NFIL3Q16649 462 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 NADSYN1Q6IA69 706 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 CES5AQ6NT32 575 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 C8orf82Q6P1X6 216 aaPredicted RBP3.3□□□□□ -1.88
ATM-230ENST00000640388 C17orf99Q6UX52 265 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 CYP26C1Q6V0L0 522 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 LRRTM4Q86VH4 590 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 ZNF354CQ86Y25 554 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 DENND6AQ8IWF6 608 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 MB21D2Q8IYB1 491 aaPredicted RBP3.3□□□□□ -1.88
ATM-230ENST00000640388 EXOC8Q8IYI6 725 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 TDHQ8IZJ6 230 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 NEXN-AS1Q8NBZ9 246 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 CLEC18CQ8NCF0 446 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 LSM14AQ8ND56 463 aaKnown RBP3.3□□□□□ -1.88
ATM-230ENST00000640388 TMEM170AQ8WVE7 144 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 MAELQ96JY0 434 aaKnown RBP3.3□□□□□ -1.88
ATM-230ENST00000640388 TM6SF1Q9BZW5 370 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 SLCO5A1Q9H2Y9 848 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 CLK4Q9HAZ1 481 aaKnown RBP3.3□□□□□ -1.88
ATM-230ENST00000640388 TMEM51Q9NW97 253 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 WWOXQ9NZC7 414 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 IL1RAPL1Q9NZN1 696 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 PEMTQ9UBM1 199 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 HACL1Q9UJ83 578 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 HSF4Q9ULV5 492 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 MYO18BQ8IUG5 2567 aa3.3□□□□□ -1.88
ATM-230ENST00000640388 NSD3Q9BZ95 1437 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 ZFYVE26Q68DK2 2539 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 DOPEY1Q5JWR5 2465 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 PLEKHH1Q9ULM0 1364 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 PLXNA3P51805 1871 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 ZNF541Q9H0D2 1346 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 IGHV4-28A0A0C4DH34 117 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 A0A1B0GVM2 712 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 LINC01553A4QN01 128 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 KCNJ13O60928 360 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 SERPINI2O75830 405 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 POLBP06746 335 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 MYF6P23409 242 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 C21orf33P30042 268 aaPredicted RBP3.29□□□□□ -1.88
ATM-230ENST00000640388 PDLIM4P50479 330 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 BLKP51451 505 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 HDAC4P56524 1084 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 ADORA2A-AS1P86434 159 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.29□□□□□ -1.88
ATM-230ENST00000640388 RUNX2Q13950 521 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 KEAP1Q14145 624 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 NFATC4Q14934 902 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 HLFQ16534 295 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 DCAF6Q58WW2 860 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 TYW3Q6IPR3 259 aaKnown RBP3.29□□□□□ -1.88
ATM-230ENST00000640388 RETSATQ6NUM9 610 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 CPXCR1Q8N123 301 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 CLIP4Q8N3C7 705 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 MYRIPQ8NFW9 859 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 TNIP2Q8NFZ5 429 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 TMED6Q8WW62 240 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 ELP4Q96EB1 424 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 TXNDC15Q96J42 360 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 CTAGE1Q96RT6 745 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 SLC25A33Q9BSK2 321 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 GPR63Q9BZJ6 419 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 TTYH1Q9H313 450 aaPredicted RBP3.29□□□□□ -1.88
ATM-230ENST00000640388 CD93Q9NPY3 652 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 BABAM1Q9NWV8 329 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 TMEM160Q9NX00 188 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 ANKRD10Q9NXR5 420 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 RRN3Q9NYV6 651 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 NDRG3Q9UGV2 375 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 CNOT7Q9UIV1 285 aaKnown RBP3.29□□□□□ -1.88
ATM-230ENST00000640388 PROCRQ9UNN8 238 aa3.29□□□□□ -1.88
ATM-230ENST00000640388 ZFHX2Q9C0A1 2572 aaPredicted RBP3.29□□□□□ -1.88
ATM-230ENST00000640388 TAF1P21675 1872 aa3.28□□□□□ -1.88
ATM-230ENST00000640388 PPIP5K1Q6PFW1 1433 aa3.28□□□□□ -1.88
ATM-230ENST00000640388 KIF1BO60333 1816 aa3.28□□□□□ -1.88
ATM-230ENST00000640388 KANK1Q14678 1352 aa3.28□□□□□ -1.88
ATM-230ENST00000640388 COL4A6Q14031 1691 aa3.28□□□□□ -1.88
ATM-230ENST00000640388 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.28□□□□□ -1.88
ATM-230ENST00000640388 EBAG9O00559 213 aa3.28□□□□□ -1.88
ATM-230ENST00000640388 ACOT8O14734 319 aa3.28□□□□□ -1.88
ATM-230ENST00000640388 TIMM23O14925 209 aa3.28□□□□□ -1.88
ATM-230ENST00000640388 GUCY1B2O75343 617 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms