RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 GPR26Q8NDV2 337 aa13.18□□□□□ -0.3
GTF3A-209ENST00000640289 OR13H1Q8NG92 308 aa13.18□□□□□ -0.3
GTF3A-209ENST00000640289 CEP76Q8TAP6 659 aa13.18□□□□□ -0.3
GTF3A-209ENST00000640289 AGAP2Q99490 1192 aa13.18□□□□□ -0.3
GTF3A-209ENST00000640289 C1QTNF7Q9BXJ2 289 aa13.18□□□□□ -0.3
GTF3A-209ENST00000640289 CAPN10Q9HC96 672 aa13.18□□□□□ -0.3
GTF3A-209ENST00000640289 CASS4Q9NQ75 786 aa13.18□□□□□ -0.3
GTF3A-209ENST00000640289 PKD2L2Q9NZM6 624 aa13.18□□□□□ -0.3
GTF3A-209ENST00000640289 HACD3Q9P035 362 aa13.18□□□□□ -0.3
GTF3A-209ENST00000640289 HS3ST3A1Q9Y663 406 aa13.18□□□□□ -0.3
GTF3A-209ENST00000640289 PLXNA2O75051 1894 aa13.17□□□□□ -0.3
GTF3A-209ENST00000640289 A6NNZ2 444 aa13.17□□□□□ -0.3
GTF3A-209ENST00000640289 K7ESM1 405 aa13.17□□□□□ -0.3
GTF3A-209ENST00000640289 DNALI1O14645 258 aaPredicted RBP13.17□□□□□ -0.3
GTF3A-209ENST00000640289 ZNF500O60304 480 aaPredicted RBP13.17□□□□□ -0.3
GTF3A-209ENST00000640289 GFRA3O60609 400 aa13.17□□□□□ -0.3
GTF3A-209ENST00000640289 ZNF806P0C7X5 589 aa13.17□□□□□ -0.3
GTF3A-209ENST00000640289 THEGLP0DJG4 465 aa13.17□□□□□ -0.3
GTF3A-209ENST00000640289 IVDP26440 423 aa13.17□□□□□ -0.3
GTF3A-209ENST00000640289 HMGCLP35914 325 aa13.17□□□□□ -0.3
GTF3A-209ENST00000640289 MAGEA6P43360 314 aa13.17□□□□□ -0.3
GTF3A-209ENST00000640289 INPP5AQ14642 412 aa13.17□□□□□ -0.3
GTF3A-209ENST00000640289 POU6F1Q14863 301 aa13.17□□□□□ -0.3
GTF3A-209ENST00000640289 TPRG1LQ5T0D9 272 aa13.17□□□□□ -0.3
GTF3A-209ENST00000640289 ALS2CLQ60I27 953 aa13.17□□□□□ -0.3
GTF3A-209ENST00000640289 ESRP1Q6NXG1 681 aaKnown RBP13.17□□□□□ -0.3
GTF3A-209ENST00000640289 KYAT3Q6YP21 454 aaKnown RBP13.17□□□□□ -0.3
GTF3A-209ENST00000640289 Q6ZSR6 202 aa13.17□□□□□ -0.3
GTF3A-209ENST00000640289 RABEPKQ7Z6M1 372 aa13.17□□□□□ -0.3
GTF3A-209ENST00000640289 ABI3BPQ7Z7G0 1075 aa13.17□□□□□ -0.3
GTF3A-209ENST00000640289 MFSD2AQ8NA29 543 aa13.17□□□□□ -0.3
GTF3A-209ENST00000640289 BRSK1Q8TDC3 778 aa13.17□□□□□ -0.3
GTF3A-209ENST00000640289 AP2M1Q96CW1 435 aa13.17□□□□□ -0.3
GTF3A-209ENST00000640289 SRPK1Q96SB4 655 aaKnown RBP13.17□□□□□ -0.3
GTF3A-209ENST00000640289 RIOK2Q9BVS4 552 aaKnown RBP13.17□□□□□ -0.3
GTF3A-209ENST00000640289 TRIM31Q9BZY9 425 aa13.17□□□□□ -0.3
GTF3A-209ENST00000640289 TRABDQ9H4I3 376 aa13.17□□□□□ -0.3
GTF3A-209ENST00000640289 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.17□□□□□ -0.38e-6■■■□□ 18.6
GTF3A-209ENST00000640289 IL17CQ9P0M4 197 aa13.17□□□□□ -0.3
GTF3A-209ENST00000640289 SLC6A14Q9UN76 642 aa13.17□□□□□ -0.3
GTF3A-209ENST00000640289 CEP192Q8TEP8 1941 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 CCDC78A2IDD5 438 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 GOLGA8MH3BSY2 632 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 TLR4O00206 839 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 KHNYNO15037 678 aaKnown RBP13.16□□□□□ -0.3
GTF3A-209ENST00000640289 VILLO15195 856 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 SOD1P00441 154 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 BPIP17213 487 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 C21orf59P57076 290 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 SESN2P58004 480 aaPredicted RBP13.16□□□□□ -0.3
GTF3A-209ENST00000640289 PFN3P60673 137 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 GRIK2Q13002 908 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 TUBB2AQ13885 445 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 SEPT6Q14141 434 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 TEAD4Q15561 434 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 TAF1AQ15573 450 aaPredicted RBP13.16□□□□□ -0.3
GTF3A-209ENST00000640289 CSRP2Q16527 193 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 KIF19Q2TAC6 998 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 CCDC38Q502W7 563 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 PRAMEF14Q5SWL7 426 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 RNASEH2BQ5TBB1 312 aaKnown RBP13.16□□□□□ -0.3
GTF3A-209ENST00000640289 IZUMO3Q5VZ72 239 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 RAET1GQ6H3X3 334 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 PNCKQ6P2M8 343 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 SYDE1Q6ZW31 735 aaPredicted RBP13.16□□□□□ -0.3
GTF3A-209ENST00000640289 MICALCLQ6ZW33 695 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 SPATS2Q86XZ4 545 aaKnown RBP13.16□□□□□ -0.3
GTF3A-209ENST00000640289 NRSN1Q8IZ57 195 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 SLC22A18ASQ8N1D0 253 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 NAT8LQ8N9F0 302 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 OR4K2Q8NGD2 314 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 OR13C4Q8NGS5 318 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 OR2I1PQ8NGU4 316 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 KLHDC7BQ96G42 594 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 TUBB2BQ9BVA1 445 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 NUSAP1Q9BXS6 441 aaKnown RBP13.16□□□□□ -0.3
GTF3A-209ENST00000640289 FAM83DQ9H4H8 585 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 CAAP1Q9H8G2 361 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 RXFP3Q9NSD7 469 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 ANKRD6Q9Y2G4 727 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 FNDC3AQ9Y2H6 1198 aaKnown RBP13.16□□□□□ -0.3
GTF3A-209ENST00000640289 OR1A2Q9Y585 309 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 SNX11Q9Y5W9 270 aa13.16□□□□□ -0.3
GTF3A-209ENST00000640289 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.16□□□□□ -0.3
GTF3A-209ENST00000640289 LNP1A1A4G5 178 aa13.15□□□□□ -0.3
GTF3A-209ENST00000640289 C2orf81A6NN90 581 aa13.15□□□□□ -0.3
GTF3A-209ENST00000640289 EFCAB8A8MWE9 144 aa13.15□□□□□ -0.3
GTF3A-209ENST00000640289 CCL22O00626 93 aa13.15□□□□□ -0.3
GTF3A-209ENST00000640289 ARHGAP33O14559 1287 aa13.15□□□□□ -0.3
GTF3A-209ENST00000640289 STX7O15400 261 aaKnown RBP13.15□□□□□ -0.3
GTF3A-209ENST00000640289 LDB2O43679 373 aa13.15□□□□□ -0.3
GTF3A-209ENST00000640289 LRP3O75074 770 aa13.15□□□□□ -0.3
GTF3A-209ENST00000640289 AVILO75366 819 aa13.15□□□□□ -0.3
GTF3A-209ENST00000640289 CRTAMO95727 393 aa13.15□□□□□ -0.3
GTF3A-209ENST00000640289 ENGP17813 658 aa13.15□□□□□ -0.3
GTF3A-209ENST00000640289 LPOP22079 712 aaPredicted RBP13.15□□□□□ -0.3
GTF3A-209ENST00000640289 CTSKP43235 329 aa13.15□□□□□ -0.3
GTF3A-209ENST00000640289 GPR1P46091 355 aa13.15□□□□□ -0.3
GTF3A-209ENST00000640289 NXPH1P58417 271 aa13.15□□□□□ -0.3
GTF3A-209ENST00000640289 CRADDP78560 199 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms