RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 KLHL32Q96NJ5 620 aa6.74□□□□□ -1.33
UPF3B-205ENST00000636792 OMDQ99983 421 aa6.74□□□□□ -1.33
UPF3B-205ENST00000636792 KRTAP4-12Q9BQ66 201 aa6.74□□□□□ -1.33
UPF3B-205ENST00000636792 GORASP1Q9BQQ3 440 aa6.74□□□□□ -1.33
UPF3B-205ENST00000636792 CEP41Q9BYV8 373 aa6.74□□□□□ -1.33
UPF3B-205ENST00000636792 BTBD1Q9H0C5 482 aa6.74□□□□□ -1.33
UPF3B-205ENST00000636792 CASS4Q9NQ75 786 aa6.74□□□□□ -1.33
UPF3B-205ENST00000636792 SPATA6Q9NWH7 488 aaPredicted RBP6.74□□□□□ -1.33
UPF3B-205ENST00000636792 BFARQ9NZS9 450 aa6.74□□□□□ -1.33
UPF3B-205ENST00000636792 BCCIPQ9P287 314 aaKnown RBP eCLIP6.74□□□□□ -1.33
UPF3B-205ENST00000636792 MTRF1LQ9UGC7 380 aaKnown RBP6.74□□□□□ -1.33
UPF3B-205ENST00000636792 DMTF1Q9Y222 760 aa6.74□□□□□ -1.33
UPF3B-205ENST00000636792 PCDHGA2Q9Y5H1 932 aa6.74□□□□□ -1.33
UPF3B-205ENST00000636792 ACTL7AQ9Y615 435 aa6.74□□□□□ -1.33
UPF3B-205ENST00000636792 ZDBF2Q9HCK1 2354 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 C2orf81A6NN90 581 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 E7ESA3 106 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 H7C0S8 307 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 MID1O15344 667 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 RNGTTO60942 597 aaKnown RBP6.73□□□□□ -1.33
UPF3B-205ENST00000636792 PMPCBO75439 489 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 SPAG6O75602 509 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 PIGNO95427 931 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 TTC4O95801 387 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 GSTA2P09210 222 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 ATXN1LP0C7T5 689 aaKnown RBP6.73□□□□□ -1.33
UPF3B-205ENST00000636792 TDGF1P13385 188 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 PAMP19021 973 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 CD6P30203 668 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 VIPR1P32241 457 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 HOXD12P35452 270 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 HMGCLP35914 325 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 WASP42768 502 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 ADPRHP54922 357 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 ARL4CP56559 192 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 RPS21P63220 83 aaKnown RBP6.73□□□□□ -1.33
UPF3B-205ENST00000636792 CREB5Q02930 508 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 ARHGEF7Q14155 803 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 TLR1Q15399 786 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 TAF1AQ15573 450 aaPredicted RBP6.73□□□□□ -1.33
UPF3B-205ENST00000636792 HIF1AQ16665 826 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 TMEM52BQ4KMG9 183 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 USP39Q53GS9 565 aaKnown RBP6.73□□□□□ -1.33
UPF3B-205ENST00000636792 PIP5KL1Q5T9C9 394 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 ANO7Q6IWH7 933 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 WDR93Q6P2C0 686 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 ZNF449Q6P9G9 518 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 KIAA1324Q6UXG2 1013 aaKnown RBP6.73□□□□□ -1.33
UPF3B-205ENST00000636792 RABEPKQ7Z6M1 372 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 CAMK1DQ8IU85 385 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 RELL1Q8IUW5 271 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 LMNTD2Q8IXW0 634 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 CBARPQ8N350 705 aaPredicted RBP6.73□□□□□ -1.33
UPF3B-205ENST00000636792 HDDC3Q8N4P3 179 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 ZCCHC9Q8N567 271 aaKnown RBP6.73□□□□□ -1.33
UPF3B-205ENST00000636792 AADATQ8N5Z0 425 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 TMEM105Q8N8V8 129 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 DNAAF3Q8N9W5 541 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 GLIS1Q8NBF1 620 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 NOA1Q8NC60 698 aaKnown RBP6.73□□□□□ -1.33
UPF3B-205ENST00000636792 LPCAT1Q8NF37 534 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 IPMKQ8NFU5 416 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 OR6K2Q8NGY2 324 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 SPATA22Q8NHS9 363 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 BRSK1Q8TDC3 778 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 HMGB4Q8WW32 186 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 UBXN4Q92575 508 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 ART4Q93070 314 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 ARRDC3Q96B67 414 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 RMDN1Q96DB5 314 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 SGSM3Q96HU1 749 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 PKNOX2Q96KN3 472 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 SERPINB12Q96P63 405 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 PLEKHG4BQ96PX9 1271 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 TRIM51Q9BSJ1 452 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 LRRC1Q9BTT6 524 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 FICDQ9BVA6 458 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 TPSG1Q9NRR2 321 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 FBXL12Q9NXK8 326 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 WSB2Q9NYS7 404 aaPredicted RBP6.73□□□□□ -1.33
UPF3B-205ENST00000636792 SAMD15Q9P1V8 674 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 FADS3Q9Y5Q0 445 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 CACNA1IQ9P0X4 2223 aa6.73□□□□□ -1.33
UPF3B-205ENST00000636792 UNC80Q8N2C7 3258 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 TP53BP1Q12888 1972 aaPredicted RBP6.72□□□□□ -1.33
UPF3B-205ENST00000636792 IGHV1OR15-9A0A0B4J2B8 117 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 A0A1W2PP55 124 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 LATO43561 262 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 DYRK3O43781 588 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 RNASEH2AO75792 299 aaKnown RBP6.72□□□□□ -1.33
UPF3B-205ENST00000636792 TMEM63AO94886 807 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 SEMA4FO95754 770 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 PDGFBP01127 241 aaPredicted RBP6.72□□□□□ -1.33
UPF3B-205ENST00000636792 PDHA1P08559 390 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 ELFN1P0C7U0 828 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 ZSCAN5DPP0CG00 497 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 TSHRP16473 764 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 ADRA1DP25100 572 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 ABL2P42684 1182 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 RPL21P46778 160 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms