RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 TADA1Q96BN2 335 aa22.33■■□□□ 1.17
SF1-220ENST00000626028 SRPK1Q96SB4 655 aaKnown RBP22.33■■□□□ 1.17
SF1-220ENST00000626028 ANKRD11Q6UB99 2663 aaPredicted RBP22.32■■□□□ 1.16
SF1-220ENST00000626028 LY6G6EA0A0G2JKS1 128 aa22.32■■□□□ 1.16
SF1-220ENST00000626028 EME2A4GXA9 379 aaPredicted RBP22.32■■□□□ 1.16
SF1-220ENST00000626028 YY2O15391 372 aa22.32■■□□□ 1.16
SF1-220ENST00000626028 JUPP14923 745 aa22.32■■□□□ 1.16
SF1-220ENST00000626028 CTPS1P17812 591 aa22.32■■□□□ 1.16
SF1-220ENST00000626028 CTNNA2P26232 953 aa22.32■■□□□ 1.16
SF1-220ENST00000626028 ETV3P41162 512 aa22.32■■□□□ 1.16
SF1-220ENST00000626028 STC1P52823 247 aa22.32■■□□□ 1.16
SF1-220ENST00000626028 GSDMDP57764 484 aa22.32■■□□□ 1.16
SF1-220ENST00000626028 KIF5AQ12840 1032 aa22.32■■□□□ 1.16
SF1-220ENST00000626028 DEFB133Q30KQ1 61 aa22.32■■□□□ 1.16
SF1-220ENST00000626028 KAZNQ674X7 775 aa22.32■■□□□ 1.16
SF1-220ENST00000626028 TSPAN33Q86UF1 283 aa22.32■■□□□ 1.16
SF1-220ENST00000626028 SYCE1Q8N0S2 351 aa22.32■■□□□ 1.16
SF1-220ENST00000626028 LRRC57Q8N9N7 239 aa22.32■■□□□ 1.16
SF1-220ENST00000626028 LRRN4Q8WUT4 740 aa22.32■■□□□ 1.16
SF1-220ENST00000626028 KRT35Q92764 455 aa22.32■■□□□ 1.16
SF1-220ENST00000626028 NAT6Q93015 286 aa22.32■■□□□ 1.16
SF1-220ENST00000626028 TSACCQ96A04 125 aaPredicted RBP22.32■■□□□ 1.16
SF1-220ENST00000626028 TEKT5Q96M29 485 aa22.32■■□□□ 1.16
SF1-220ENST00000626028 AGAP3Q96P47 875 aa22.32■■□□□ 1.16
SF1-220ENST00000626028 MLPHQ9BV36 600 aaPredicted RBP22.32■■□□□ 1.16
SF1-220ENST00000626028 LACRTQ9GZZ8 138 aa22.32■■□□□ 1.16
SF1-220ENST00000626028 CLPBQ9H078 707 aa22.32■■□□□ 1.16
SF1-220ENST00000626028 TCEAL2Q9H3H9 227 aaPredicted RBP22.32■■□□□ 1.16
SF1-220ENST00000626028 DOLKQ9UPQ8 538 aa22.32■■□□□ 1.16
SF1-220ENST00000626028 DUSP10Q9Y6W6 482 aa22.32■■□□□ 1.16
SF1-220ENST00000626028 U3KQA8 63 aa22.32■■□□□ 1.16
SF1-220ENST00000626028 TMEM202A6NGA9 273 aa22.31■■□□□ 1.16
SF1-220ENST00000626028 APOC4-APOC2K7ER74 178 aa22.31■■□□□ 1.16
SF1-220ENST00000626028 ZNF189O75820 626 aaPredicted RBP22.31■■□□□ 1.16
SF1-220ENST00000626028 APOC2P02655 101 aa22.31■■□□□ 1.16
SF1-220ENST00000626028 CAPNS1P04632 268 aa22.31■■□□□ 1.16
SF1-220ENST00000626028 CAMK2BQ13554 666 aa22.31■■□□□ 1.16
SF1-220ENST00000626028 NR0B2Q15466 257 aa22.31■■□□□ 1.16
SF1-220ENST00000626028 DENND2CQ68D51 928 aa22.31■■□□□ 1.16
SF1-220ENST00000626028 HEATR4Q86WZ0 1026 aa22.31■■□□□ 1.16
SF1-220ENST00000626028 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.31■■□□□ 1.16
SF1-220ENST00000626028 LPCAT1Q8NF37 534 aa22.31■■□□□ 1.16
SF1-220ENST00000626028 CCHCR1Q8TD31 782 aa22.31■■□□□ 1.16
SF1-220ENST00000626028 FERMT1Q9BQL6 677 aa22.31■■□□□ 1.16
SF1-220ENST00000626028 CDH19Q9H159 772 aa22.31■■□□□ 1.16
SF1-220ENST00000626028 SCN8AQ9UQD0 1980 aa22.3■■□□□ 1.16
SF1-220ENST00000626028 PECAM1P16284 738 aaPredicted RBP22.3■■□□□ 1.16
SF1-220ENST00000626028 PTPN3P26045 913 aa22.3■■□□□ 1.16
SF1-220ENST00000626028 MARCKSL1P49006 195 aa22.3■■□□□ 1.16
SF1-220ENST00000626028 RWDD2BP57060 319 aa22.3■■□□□ 1.16
SF1-220ENST00000626028 CDK3Q00526 305 aa22.3■■□□□ 1.16
SF1-220ENST00000626028 INSM1Q01101 510 aaPredicted RBP22.3■■□□□ 1.16
SF1-220ENST00000626028 QPCTQ16769 361 aa22.3■■□□□ 1.16
SF1-220ENST00000626028 HES3Q5TGS1 186 aa22.3■■□□□ 1.16
SF1-220ENST00000626028 ADAMTSL4Q6UY14 1074 aa22.3■■□□□ 1.16
SF1-220ENST00000626028 DCBLD1Q8N8Z6 715 aa22.3■■□□□ 1.16
SF1-220ENST00000626028 ACRBPQ8NEB7 543 aa22.3■■□□□ 1.16
SF1-220ENST00000626028 OR6C4Q8NGE1 309 aa22.3■■□□□ 1.16
SF1-220ENST00000626028 WDR48Q8TAF3 677 aa22.3■■□□□ 1.16
SF1-220ENST00000626028 ZCCHC14Q8WYQ9 949 aaKnown RBP22.3■■□□□ 1.16
SF1-220ENST00000626028 OR1E3Q8WZA6 343 aa22.3■■□□□ 1.16
SF1-220ENST00000626028 AP2M1Q96CW1 435 aa22.3■■□□□ 1.16
SF1-220ENST00000626028 PDXPQ96GD0 296 aa22.3■■□□□ 1.16
SF1-220ENST00000626028 TRIB3Q96RU7 358 aa22.3■■□□□ 1.16
SF1-220ENST00000626028 LGR4Q9BXB1 951 aa22.3■■□□□ 1.16
SF1-220ENST00000626028 GLOD4Q9HC38 313 aa22.3■■□□□ 1.16
SF1-220ENST00000626028 FGF22Q9HCT0 170 aa22.3■■□□□ 1.16
SF1-220ENST00000626028 SEPT10Q9P0V9 454 aa22.3■■□□□ 1.16
SF1-220ENST00000626028 SAE1Q9UBE0 346 aaPredicted RBP22.3■■□□□ 1.16
SF1-220ENST00000626028 TRHDEQ9UKU6 1024 aa22.3■■□□□ 1.16
SF1-220ENST00000626028 CLCA2Q9UQC9 943 aa22.3■■□□□ 1.16
SF1-220ENST00000626028 PRSS38A1L453 326 aa22.29■■□□□ 1.16
SF1-220ENST00000626028 MIF4GDA9UHW6 222 aaKnown RBP22.29■■□□□ 1.16
SF1-220ENST00000626028 EPOP01588 193 aa22.29■■□□□ 1.16
SF1-220ENST00000626028 ADCY2Q08462 1091 aa22.29■■□□□ 1.16
SF1-220ENST00000626028 C1orf61Q13536 156 aa22.29■■□□□ 1.16
SF1-220ENST00000626028 PEX6Q13608 980 aa22.29■■□□□ 1.16
SF1-220ENST00000626028 RAET1GQ6H3X3 334 aa22.29■■□□□ 1.16
SF1-220ENST00000626028 CCDC70Q6NSX1 233 aa22.29■■□□□ 1.16
SF1-220ENST00000626028 RD3Q7Z3Z2 195 aa22.29■■□□□ 1.16
SF1-220ENST00000626028 ARL10Q8N8L6 244 aa22.29■■□□□ 1.16
SF1-220ENST00000626028 IFI44Q8TCB0 444 aa22.29■■□□□ 1.16
SF1-220ENST00000626028 GRAMD1AQ96CP6 724 aa22.29■■□□□ 1.16
SF1-220ENST00000626028 QKIQ96PU8 341 aaKnown RBP eCLIP22.29■■□□□ 1.166e-44■■■■□ 25.8
SF1-220ENST00000626028 FRMD8Q9BZ67 464 aaPredicted RBP22.29■■□□□ 1.16
SF1-220ENST00000626028 ABCG8Q9H221 673 aa22.29■■□□□ 1.16
SF1-220ENST00000626028 CCDC86Q9H6F5 360 aaKnown RBP22.29■■□□□ 1.16
SF1-220ENST00000626028 CAAP1Q9H8G2 361 aa22.29■■□□□ 1.16
SF1-220ENST00000626028 MAGEE1Q9HCI5 957 aa22.29■■□□□ 1.16
SF1-220ENST00000626028 TRNAU1APQ9NX07 287 aaKnown RBP22.29■■□□□ 1.16
SF1-220ENST00000626028 SLC17A4Q9Y2C5 497 aa22.29■■□□□ 1.16
SF1-220ENST00000626028 COL27A1Q8IZC6 1860 aaPredicted RBP22.28■■□□□ 1.16
SF1-220ENST00000626028 C1orf232A0A0U1RR37 186 aa22.28■■□□□ 1.16
SF1-220ENST00000626028 GRID2IPA4D2P6 1211 aa22.28■■□□□ 1.16
SF1-220ENST00000626028 OPA1O60313 960 aa22.28■■□□□ 1.16
SF1-220ENST00000626028 GPR1P46091 355 aa22.28■■□□□ 1.16
SF1-220ENST00000626028 CDK18Q07002 472 aa22.28■■□□□ 1.16
SF1-220ENST00000626028 WASHC5Q12768 1159 aa22.28■■□□□ 1.16
SF1-220ENST00000626028 CDKN3Q16667 212 aa22.28■■□□□ 1.16
SF1-220ENST00000626028 PELI3Q8N2H9 469 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms