RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 PDE2AO00408 941 aaPredicted RBP13.85□□□□□ -0.19
SNX1-214ENST00000625244 BUB1O43683 1085 aa13.85□□□□□ -0.19
SNX1-214ENST00000625244 KIAA0754O94854 1291 aa13.85□□□□□ -0.19
SNX1-214ENST00000625244 MYCLP1P12525 358 aaPredicted RBP13.85□□□□□ -0.19
SNX1-214ENST00000625244 GNA15P30679 374 aa13.85□□□□□ -0.19
SNX1-214ENST00000625244 ADCY8P40145 1251 aa13.85□□□□□ -0.19
SNX1-214ENST00000625244 FASLGP48023 281 aa13.85□□□□□ -0.19
SNX1-214ENST00000625244 RNASE9P60153 205 aaKnown RBP13.85□□□□□ -0.19
SNX1-214ENST00000625244 RHOAP61586 193 aa13.85□□□□□ -0.19
SNX1-214ENST00000625244 SLC6A3Q01959 620 aa13.85□□□□□ -0.19
SNX1-214ENST00000625244 ZRSR2Q15696 482 aaKnown RBP13.85□□□□□ -0.19
SNX1-214ENST00000625244 ACBD5Q5T8D3 534 aaPredicted RBP13.85□□□□□ -0.19
SNX1-214ENST00000625244 NLRP14Q86W24 1093 aa13.85□□□□□ -0.19
SNX1-214ENST00000625244 PASD1Q8IV76 773 aa13.85□□□□□ -0.19
SNX1-214ENST00000625244 CISD2Q8N5K1 135 aaKnown RBP13.85□□□□□ -0.19
SNX1-214ENST00000625244 SLC37A2Q8TED4 501 aa13.85□□□□□ -0.19
SNX1-214ENST00000625244 CT55Q8WUE5 264 aa13.85□□□□□ -0.19
SNX1-214ENST00000625244 EXOC2Q96KP1 924 aa13.85□□□□□ -0.19
SNX1-214ENST00000625244 FRMD8Q9BZ67 464 aaPredicted RBP13.85□□□□□ -0.19
SNX1-214ENST00000625244 GTPBP4Q9BZE4 634 aaKnown RBP13.85□□□□□ -0.19
SNX1-214ENST00000625244 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.85□□□□□ -0.19
SNX1-214ENST00000625244 RCOR1Q9UKL0 485 aa13.85□□□□□ -0.19
SNX1-214ENST00000625244 PKDREJQ9NTG1 2253 aa13.84□□□□□ -0.19
SNX1-214ENST00000625244 CFAP69A5D8W1 941 aa13.84□□□□□ -0.19
SNX1-214ENST00000625244 PRSS44E7EML9 344 aa13.84□□□□□ -0.19
SNX1-214ENST00000625244 PMM2O15305 246 aa13.84□□□□□ -0.19
SNX1-214ENST00000625244 KDELR3O43731 214 aa13.84□□□□□ -0.19
SNX1-214ENST00000625244 NDUFA10O95299 355 aa13.84□□□□□ -0.19
SNX1-214ENST00000625244 F9P00740 461 aa13.84□□□□□ -0.19
SNX1-214ENST00000625244 ACTR1BP42025 376 aa13.84□□□□□ -0.19
SNX1-214ENST00000625244 POLD2P49005 469 aa13.84□□□□□ -0.19
SNX1-214ENST00000625244 ITGA1P56199 1179 aa13.84□□□□□ -0.19
SNX1-214ENST00000625244 ACTR1AP61163 376 aa13.84□□□□□ -0.19
SNX1-214ENST00000625244 RPS18P62269 152 aaKnown RBP13.84□□□□□ -0.19
SNX1-214ENST00000625244 TESK1Q15569 626 aa13.84□□□□□ -0.19
SNX1-214ENST00000625244 UGT8Q16880 541 aa13.84□□□□□ -0.19
SNX1-214ENST00000625244 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.84□□□□□ -0.19
SNX1-214ENST00000625244 LIPIQ6XZB0 460 aa13.84□□□□□ -0.19
SNX1-214ENST00000625244 ZNF397Q8NF99 534 aaPredicted RBP13.84□□□□□ -0.19
SNX1-214ENST00000625244 THAP4Q8WY91 577 aa13.84□□□□□ -0.19
SNX1-214ENST00000625244 ELMO2Q96JJ3 720 aa13.84□□□□□ -0.19
SNX1-214ENST00000625244 NCAPGQ9BPX3 1015 aa13.84□□□□□ -0.19
SNX1-214ENST00000625244 MAGEH1Q9H213 219 aa13.84□□□□□ -0.19
SNX1-214ENST00000625244 RUBCNLQ9H714 662 aa13.84□□□□□ -0.19
SNX1-214ENST00000625244 PADI1Q9ULC6 663 aa13.84□□□□□ -0.19
SNX1-214ENST00000625244 PCDHGB7Q9Y5F8 929 aa13.84□□□□□ -0.19
SNX1-214ENST00000625244 A0A1B0GVL5 298 aa13.83□□□□□ -0.2
SNX1-214ENST00000625244 LRRTM2O43300 516 aa13.83□□□□□ -0.2
SNX1-214ENST00000625244 CEACAM4O75871 244 aa13.83□□□□□ -0.2
SNX1-214ENST00000625244 EML2O95834 649 aa13.83□□□□□ -0.2
SNX1-214ENST00000625244 CCNYL3P0C7X3 344 aa13.83□□□□□ -0.2
SNX1-214ENST00000625244 PFKFB1P16118 471 aa13.83□□□□□ -0.2
SNX1-214ENST00000625244 GARSP41250 739 aaKnown RBP13.83□□□□□ -0.2
SNX1-214ENST00000625244 MAPKAPK2P49137 400 aa13.83□□□□□ -0.2
SNX1-214ENST00000625244 NDST2P52849 883 aa13.83□□□□□ -0.2
SNX1-214ENST00000625244 SH3BP2P78314 561 aa13.83□□□□□ -0.2
SNX1-214ENST00000625244 CDK18Q07002 472 aa13.83□□□□□ -0.2
SNX1-214ENST00000625244 NFATC2Q13469 925 aa13.83□□□□□ -0.2
SNX1-214ENST00000625244 IL10RAQ13651 578 aa13.83□□□□□ -0.2
SNX1-214ENST00000625244 ELOAQ14241 798 aaKnown RBP13.83□□□□□ -0.2
SNX1-214ENST00000625244 PLEKHN1Q494U1 663 aaPredicted RBP13.83□□□□□ -0.2
SNX1-214ENST00000625244 CAMK1DQ8IU85 385 aa13.83□□□□□ -0.2
SNX1-214ENST00000625244 FDCSPQ8NFU4 85 aa13.83□□□□□ -0.2
SNX1-214ENST00000625244 NUDT9Q9BW91 350 aa13.83□□□□□ -0.2
SNX1-214ENST00000625244 TEX101Q9BY14 249 aa13.83□□□□□ -0.2
SNX1-214ENST00000625244 KLC2Q9H0B6 622 aa13.83□□□□□ -0.2
SNX1-214ENST00000625244 LHX9Q9NQ69 397 aa13.83□□□□□ -0.2
SNX1-214ENST00000625244 LHX3Q9UBR4 397 aa13.83□□□□□ -0.2
SNX1-214ENST00000625244 LNPEPQ9UIQ6 1025 aa13.83□□□□□ -0.2
SNX1-214ENST00000625244 STAP1Q9ULZ2 295 aa13.83□□□□□ -0.2
SNX1-214ENST00000625244 HEATR9A2RTY3 570 aa13.82□□□□□ -0.2
SNX1-214ENST00000625244 A8MX80 341 aa13.82□□□□□ -0.2
SNX1-214ENST00000625244 ZG16O60844 167 aa13.82□□□□□ -0.2
SNX1-214ENST00000625244 RAMP2O60895 175 aa13.82□□□□□ -0.2
SNX1-214ENST00000625244 ELFN1P0C7U0 828 aa13.82□□□□□ -0.2
SNX1-214ENST00000625244 HNRNPH3P31942 346 aaKnown RBP13.82□□□□□ -0.2
SNX1-214ENST00000625244 MAPK9P45984 424 aa13.82□□□□□ -0.2
SNX1-214ENST00000625244 PMS1P54277 932 aaKnown RBP13.82□□□□□ -0.2
SNX1-214ENST00000625244 FKBP3Q00688 224 aaKnown RBP13.82□□□□□ -0.2
SNX1-214ENST00000625244 PEX6Q13608 980 aa13.82□□□□□ -0.2
SNX1-214ENST00000625244 SLC25A52Q3SY17 297 aa13.82□□□□□ -0.2
SNX1-214ENST00000625244 PTPN20Q4JDL3 420 aa13.82□□□□□ -0.2
SNX1-214ENST00000625244 INO80DQ53TQ3 878 aaPredicted RBP13.82□□□□□ -0.2
SNX1-214ENST00000625244 AFMIDQ63HM1 303 aa13.82□□□□□ -0.2
SNX1-214ENST00000625244 RWDD4Q6NW29 188 aaKnown RBP13.82□□□□□ -0.2
SNX1-214ENST00000625244 BRAT1Q6PJG6 821 aa13.82□□□□□ -0.2
SNX1-214ENST00000625244 FAM131BQ86XD5 332 aa13.82□□□□□ -0.2
SNX1-214ENST00000625244 RASGRP3Q8IV61 690 aa13.82□□□□□ -0.2
SNX1-214ENST00000625244 RHOT1Q8IXI2 618 aa13.82□□□□□ -0.2
SNX1-214ENST00000625244 SFRP1Q8N474 314 aa13.82□□□□□ -0.2
SNX1-214ENST00000625244 C1orf131Q8NDD1 294 aaKnown RBP13.82□□□□□ -0.2
SNX1-214ENST00000625244 EHBP1Q8NDI1 1231 aa13.82□□□□□ -0.2
SNX1-214ENST00000625244 OR6C1Q96RD1 312 aa13.82□□□□□ -0.2
SNX1-214ENST00000625244 AKIRIN1Q9H9L7 192 aaPredicted RBP13.82□□□□□ -0.2
SNX1-214ENST00000625244 PHPT1Q9NRX4 125 aaPredicted RBP13.82□□□□□ -0.2
SNX1-214ENST00000625244 TMEM248Q9NWD8 314 aa13.82□□□□□ -0.2
SNX1-214ENST00000625244 USP25Q9UHP3 1055 aa13.82□□□□□ -0.2
SNX1-214ENST00000625244 GOLGA6L3A6NEY3 463 aa13.81□□□□□ -0.2
SNX1-214ENST00000625244 C21orf140B9A014 251 aa13.81□□□□□ -0.2
SNX1-214ENST00000625244 FAM72CH0Y354 149 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms