RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 DPYSQ14117 519 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 LPIN1Q14693 890 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 TSNQ15631 228 aaKnown RBP13.25□□□□□ -0.29
SIRPA-204ENST00000622179 GPR141Q7Z602 305 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 PIM3Q86V86 326 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 SCLYQ96I15 445 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 PANX3Q96QZ0 392 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 C16orf96A6NNT2 1141 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 SYN3O14994 580 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 TIPRLO75663 272 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 CHRNA1P02708 482 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 FAM163BP0C2L3 166 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 ATP6V0D1P61421 351 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 PABPC1LQ4VXU2 614 aaKnown RBP13.25□□□□□ -0.29
SIRPA-204ENST00000622179 HORMAD1Q86X24 394 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 PNPLA1Q8N8W4 532 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 MAGEE2Q8TD90 523 aaPredicted RBP13.25□□□□□ -0.29
SIRPA-204ENST00000622179 STYXQ8WUJ0 223 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 TWIST2Q8WVJ9 160 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 LPGAT1Q92604 370 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 RTP4Q96DX8 246 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 FUBP3Q96I24 572 aaKnown RBP eCLIP13.25□□□□□ -0.29
SIRPA-204ENST00000622179 MS4A4AQ96JQ5 239 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 MIPEPQ99797 713 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 OXCT2Q9BYC2 517 aaPredicted RBP13.25□□□□□ -0.29
SIRPA-204ENST00000622179 SMOC2Q9H3U7 446 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 MTMR10Q9NXD2 777 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 SLC13A4Q9UKG4 626 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 GNG14A0A1W2PPG7 69 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 DGKAP23743 735 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 CPSF6Q16630 551 aaKnown RBP eCLIP13.25□□□□□ -0.29
SIRPA-204ENST00000622179 PGAM4Q8N0Y7 254 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 FBXO30Q8TB52 745 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 CENPIQ92674 756 aaPredicted RBP13.25□□□□□ -0.29
SIRPA-204ENST00000622179 CORO1BQ9BR76 489 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 EMILIN2Q9BXX0 1053 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 ARHGAP39Q9C0H5 1083 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 HIPK3Q9H422 1215 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 NOL11Q9H8H0 719 aaKnown RBP13.25□□□□□ -0.29
SIRPA-204ENST00000622179 EVPLQ92817 2033 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 PCNAP12004 261 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 UQCRBP14927 111 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 RPL38P63173 70 aaKnown RBP13.25□□□□□ -0.29
SIRPA-204ENST00000622179 ALFQ53S48 1182 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 MTX3Q5HYI7 312 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 TNIP2Q8NFZ5 429 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 CIB1Q99828 191 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 PTPN18Q99952 460 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 DNAJB4Q9UDY4 337 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 EVLQ9UI08 416 aaPredicted RBP13.25□□□□□ -0.29
SIRPA-204ENST00000622179 FKBPLQ9UIM3 349 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 TNPO3Q9Y5L0 923 aaKnown RBP13.25□□□□□ -0.29
SIRPA-204ENST00000622179 LZTS3O60299 673 aaPredicted RBP13.24□□□□□ -0.29
SIRPA-204ENST00000622179 VCLP18206 1134 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 ETV4P43268 484 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 POLD2P49005 469 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 GSTA3Q16772 222 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 SIRPB2Q5JXA9 342 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 BRSK1Q8TDC3 778 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 FCGR1AP12314 374 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 ITGAXP20702 1163 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 GABRR2P28476 465 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 SOAT1P35610 550 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 SEMG2Q02383 582 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 TRIM32Q13049 653 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 FAM98BQ52LJ0 330 aaKnown RBP13.24□□□□□ -0.29
SIRPA-204ENST00000622179 CCDC81Q6ZN84 652 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 CACUL1Q86Y37 369 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 TAGAPQ8N103 731 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 FBXO22Q8NEZ5 403 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 ITFG1Q8TB96 612 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 GFM2Q969S9 779 aaKnown RBP13.24□□□□□ -0.29
SIRPA-204ENST00000622179 TRAPPC9Q96Q05 1148 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 BDH2Q9BUT1 245 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 RMND5AQ9H871 391 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 NMUR1Q9HB89 426 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 BLOC1S6Q9UL45 172 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 MBLAC1A4D2B0 266 aaPredicted RBP13.24□□□□□ -0.29
SIRPA-204ENST00000622179 SYNDIG1LA6NDD5 238 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 INSIG1O15503 277 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 LYNP07948 512 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 AQP4P55087 323 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 PRKG2Q13237 762 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 STARD3Q14849 445 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 ASRGL1Q7L266 308 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 SLC44A2Q8IWA5 706 aaPredicted RBP13.24□□□□□ -0.29
SIRPA-204ENST00000622179 SELENOMQ8WWX9 145 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 MPP4Q96JB8 637 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 NR1H4Q96RI1 486 aaPredicted RBP13.24□□□□□ -0.29
SIRPA-204ENST00000622179 PCDHAC1Q9H158 963 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 EBF3Q9H4W6 596 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 TMLHEQ9NVH6 421 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 COMMD8Q9NX08 183 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 STK39Q9UEW8 545 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 GNEQ9Y223 722 aaKnown RBP13.24□□□□□ -0.29
SIRPA-204ENST00000622179 MYRFQ9Y2G1 1151 aa13.24□□□□□ -0.29
SIRPA-204ENST00000622179 FCF1Q9Y324 198 aaKnown RBP13.24□□□□□ -0.29
SIRPA-204ENST00000622179 RBM47A0AV96 593 aaKnown RBP13.23□□□□□ -0.29
SIRPA-204ENST00000622179 RGS14O43566 566 aa13.23□□□□□ -0.29
SIRPA-204ENST00000622179 ULK1O75385 1050 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms