RNA–Protein interactions for RNA: ENST00000621747.5

VEGFA-229, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-229ENST00000621747 RFX6Q8HWS3 928 aa25.17■■□□□ 1.62
VEGFA-229ENST00000621747 LSMEM2Q8N112 164 aa25.17■■□□□ 1.62
VEGFA-229ENST00000621747 TC2NQ8N9U0 490 aa25.17■■□□□ 1.62
VEGFA-229ENST00000621747 FAM46DQ8NEK8 389 aa25.17■■□□□ 1.62
VEGFA-229ENST00000621747 SNIP1Q8TAD8 396 aaKnown RBP25.17■■□□□ 1.62
VEGFA-229ENST00000621747 FGF11Q92914 225 aa25.17■■□□□ 1.62
VEGFA-229ENST00000621747 CARS2Q9HA77 564 aaKnown RBP25.17■■□□□ 1.62
VEGFA-229ENST00000621747 PCDH9Q9HC56 1237 aa25.17■■□□□ 1.62
VEGFA-229ENST00000621747 CAPN8A6NHC0 703 aa25.16■■□□□ 1.62
VEGFA-229ENST00000621747 PPP1R12AO14974 1030 aaPredicted RBP25.16■■□□□ 1.62
VEGFA-229ENST00000621747 TNNT1P13805 278 aa25.16■■□□□ 1.62
VEGFA-229ENST00000621747 NOP2P46087 812 aaKnown RBP25.16■■□□□ 1.62
VEGFA-229ENST00000621747 GPR1P46091 355 aa25.16■■□□□ 1.62
VEGFA-229ENST00000621747 GABREP78334 506 aa25.16■■□□□ 1.62
VEGFA-229ENST00000621747 AP1B1Q10567 949 aa25.16■■□□□ 1.62
VEGFA-229ENST00000621747 SPIDRQ14159 915 aa25.16■■□□□ 1.62
VEGFA-229ENST00000621747 TBC1D25Q3MII6 688 aa25.16■■□□□ 1.62
VEGFA-229ENST00000621747 CCDC74AQ96AQ1 378 aa25.16■■□□□ 1.62
VEGFA-229ENST00000621747 RNF25Q96BH1 459 aaPredicted RBP25.16■■□□□ 1.62
VEGFA-229ENST00000621747 FRMD8Q9BZ67 464 aaPredicted RBP25.16■■□□□ 1.62
VEGFA-229ENST00000621747 SYNDIG1Q9H7V2 258 aa25.16■■□□□ 1.62
VEGFA-229ENST00000621747 POLR1BQ9H9Y6 1135 aa25.16■■□□□ 1.62
VEGFA-229ENST00000621747 MPOP05164 745 aa25.15■■□□□ 1.62
VEGFA-229ENST00000621747 PYGLP06737 847 aa25.15■■□□□ 1.62
VEGFA-229ENST00000621747 COMTP21964 271 aa25.15■■□□□ 1.62
VEGFA-229ENST00000621747 EIF2S3P41091 472 aaKnown RBP25.15■■□□□ 1.62
VEGFA-229ENST00000621747 ABCG1P45844 678 aa25.15■■□□□ 1.62
VEGFA-229ENST00000621747 LSSP48449 732 aa25.15■■□□□ 1.62
VEGFA-229ENST00000621747 PTSQ03393 145 aa25.15■■□□□ 1.62
VEGFA-229ENST00000621747 IHHQ14623 411 aa25.15■■□□□ 1.62
VEGFA-229ENST00000621747 ZNF765Q7L2R6 523 aa25.15■■□□□ 1.62
VEGFA-229ENST00000621747 RAVER1Q8IY67 606 aaKnown RBP25.15■■□□□ 1.62
VEGFA-229ENST00000621747 LPCAT1Q8NF37 534 aa25.15■■□□□ 1.62
VEGFA-229ENST00000621747 GPR156Q8NFN8 814 aa25.15■■□□□ 1.62
VEGFA-229ENST00000621747 AP2M1Q96CW1 435 aa25.15■■□□□ 1.62
VEGFA-229ENST00000621747 BRD8Q9H0E9 1235 aa25.15■■□□□ 1.62
VEGFA-229ENST00000621747 ABCG8Q9H221 673 aa25.15■■□□□ 1.62
VEGFA-229ENST00000621747 CD84Q9UIB8 345 aa25.15■■□□□ 1.62
VEGFA-229ENST00000621747 HYOU1Q9Y4L1 999 aa25.15■■□□□ 1.62
VEGFA-229ENST00000621747 PKD1L2Q7Z442 2459 aa25.15■■□□□ 1.62
VEGFA-229ENST00000621747 PRLP01236 227 aa25.14■■□□□ 1.62
VEGFA-229ENST00000621747 CEACAM5P06731 702 aa25.14■■□□□ 1.62
VEGFA-229ENST00000621747 CD86P42081 329 aa25.14■■□□□ 1.62
VEGFA-229ENST00000621747 STC1P52823 247 aa25.14■■□□□ 1.62
VEGFA-229ENST00000621747 HADHBP55084 474 aaKnown RBP25.14■■□□□ 1.62
VEGFA-229ENST00000621747 ZBTB17Q13105 803 aa25.14■■□□□ 1.62
VEGFA-229ENST00000621747 OGFOD3Q6PK18 319 aa25.14■■□□□ 1.62
VEGFA-229ENST00000621747 NLRP8Q86W28 1048 aa25.14■■□□□ 1.62
VEGFA-229ENST00000621747 CCDC170Q8IYT3 715 aa25.14■■□□□ 1.62
VEGFA-229ENST00000621747 NRSN1Q8IZ57 195 aa25.14■■□□□ 1.62
VEGFA-229ENST00000621747 KIAA1524Q8TCG1 905 aa25.14■■□□□ 1.62
VEGFA-229ENST00000621747 ZNF578Q96N58 590 aaPredicted RBP25.14■■□□□ 1.62
VEGFA-229ENST00000621747 OLFM3Q96PB7 478 aa25.14■■□□□ 1.62
VEGFA-229ENST00000621747 SMIM14Q96QK8 99 aa25.14■■□□□ 1.62
VEGFA-229ENST00000621747 GSDMCQ9BYG8 508 aa25.14■■□□□ 1.62
VEGFA-229ENST00000621747 DPEP2Q9H4A9 486 aa25.14■■□□□ 1.62
VEGFA-229ENST00000621747 LUC7LQ9NQ29 371 aaKnown RBP25.14■■□□□ 1.62
VEGFA-229ENST00000621747 TRNAU1APQ9NX07 287 aaKnown RBP25.14■■□□□ 1.62
VEGFA-229ENST00000621747 ENTPD2Q9Y5L3 495 aa25.14■■□□□ 1.62
VEGFA-229ENST00000621747 ADAMTS20P59510 1910 aa25.14■■□□□ 1.61
VEGFA-229ENST00000621747 APC2O95996 2303 aa25.13■■□□□ 1.61
VEGFA-229ENST00000621747 A0A0U1RQS6 177 aa25.13■■□□□ 1.61
VEGFA-229ENST00000621747 B4DGG1 531 aa25.13■■□□□ 1.61
VEGFA-229ENST00000621747 NTN3O00634 580 aaPredicted RBP25.13■■□□□ 1.61
VEGFA-229ENST00000621747 PSTPIP1O43586 416 aa25.13■■□□□ 1.61
VEGFA-229ENST00000621747 DXOO77932 396 aaKnown RBP25.13■■□□□ 1.61
VEGFA-229ENST00000621747 ILF3Q12906 894 aaKnown RBP eCLIP25.13■■□□□ 1.61
VEGFA-229ENST00000621747 SPA17Q15506 151 aa25.13■■□□□ 1.61
VEGFA-229ENST00000621747 NPNTQ6UXI9 565 aa25.13■■□□□ 1.61
VEGFA-229ENST00000621747 ADAMTSL4Q6UY14 1074 aa25.13■■□□□ 1.61
VEGFA-229ENST00000621747 RFLNAQ6ZTI6 216 aa25.13■■□□□ 1.61
VEGFA-229ENST00000621747 BZW1Q7L1Q6 419 aaKnown RBP25.13■■□□□ 1.61
VEGFA-229ENST00000621747 CCL4L1Q8NHW4 92 aa25.13■■□□□ 1.61
VEGFA-229ENST00000621747 ATXN7L3BQ96GX2 97 aa25.13■■□□□ 1.61
VEGFA-229ENST00000621747 LYSMD1Q96S90 227 aa25.13■■□□□ 1.61
VEGFA-229ENST00000621747 ADGRE3Q9BY15 652 aa25.13■■□□□ 1.61
VEGFA-229ENST00000621747 SUDS3Q9H7L9 328 aaPredicted RBP25.13■■□□□ 1.61
VEGFA-229ENST00000621747 SLC17A4Q9Y2C5 497 aa25.13■■□□□ 1.61
VEGFA-229ENST00000621747 ANKRD11Q6UB99 2663 aaPredicted RBP25.12■■□□□ 1.61
VEGFA-229ENST00000621747 LCA5LO95447 670 aa25.12■■□□□ 1.61
VEGFA-229ENST00000621747 IVLP07476 585 aa25.12■■□□□ 1.61
VEGFA-229ENST00000621747 MMP2P08253 660 aa25.12■■□□□ 1.61
VEGFA-229ENST00000621747 GLB1P16278 677 aa25.12■■□□□ 1.61
VEGFA-229ENST00000621747 CYLC1P35663 651 aaPredicted RBP25.12■■□□□ 1.61
VEGFA-229ENST00000621747 GNPDA1P46926 289 aa25.12■■□□□ 1.61
VEGFA-229ENST00000621747 DYNLT1P63172 113 aa25.12■■□□□ 1.61
VEGFA-229ENST00000621747 SKOR1P84550 965 aa25.12■■□□□ 1.61
VEGFA-229ENST00000621747 TFDP2Q14188 446 aa25.12■■□□□ 1.61
VEGFA-229ENST00000621747 C14orf28Q4W4Y0 310 aa25.12■■□□□ 1.61
VEGFA-229ENST00000621747 MFSD7Q6UXD7 560 aa25.12■■□□□ 1.61
VEGFA-229ENST00000621747 PDZD3Q86UT5 571 aa25.12■■□□□ 1.61
VEGFA-229ENST00000621747 CNTD1Q8N815 330 aa25.12■■□□□ 1.61
VEGFA-229ENST00000621747 GPBAR1Q8TDU6 330 aa25.12■■□□□ 1.61
VEGFA-229ENST00000621747 GFM1Q96RP9 751 aaKnown RBP25.12■■□□□ 1.61
VEGFA-229ENST00000621747 MLPHQ9BV36 600 aaPredicted RBP25.12■■□□□ 1.61
VEGFA-229ENST00000621747 SEPT10Q9P0V9 454 aa25.12■■□□□ 1.61
VEGFA-229ENST00000621747 RABGEF1Q9UJ41 708 aa25.12■■□□□ 1.61
VEGFA-229ENST00000621747 SUFUQ9UMX1 484 aa25.12■■□□□ 1.61
VEGFA-229ENST00000621747 SATB2Q9UPW6 733 aa25.12■■□□□ 1.61
VEGFA-229ENST00000621747 ACACAQ13085 2346 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms