RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 NCEH1Q6PIU2 408 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 HTR3DQ70Z44 454 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 MRPL46Q9H2W6 279 aaKnown RBP9.94□□□□□ -0.82
VTA1-205ENST00000620996 POMKQ9H5K3 350 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 TLE6Q9H808 572 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 STOML2Q9UJZ1 356 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 APOBEC2Q9Y235 224 aaKnown RBP9.94□□□□□ -0.82
VTA1-205ENST00000620996 PKP3Q9Y446 797 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 ARIH1Q9Y4X5 557 aaPredicted RBP9.94□□□□□ -0.82
VTA1-205ENST00000620996 WNT6Q9Y6F9 365 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 GOLGA8QA0A0J9YX86 632 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 GOLGA8OA6NCC3 632 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 GOLGA8NF8WBI6 632 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 XYLBO75191 536 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 PRLP01236 227 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 ESRRAP11474 423 aaPredicted RBP9.93□□□□□ -0.82
VTA1-205ENST00000620996 KDSRQ06136 332 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 UBAP2LQ14157 1087 aaKnown RBP9.93□□□□□ -0.82
VTA1-205ENST00000620996 TAF1AQ15573 450 aaPredicted RBP9.93□□□□□ -0.82
VTA1-205ENST00000620996 TSNAXIP1Q2TAA8 658 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 PLEKHG6Q3KR16 790 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 LRRC73Q5JTD7 316 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 LIPMQ5VYY2 423 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 NXNQ6DKJ4 435 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 FAM109BQ6ICB4 259 aaPredicted RBP9.93□□□□□ -0.82
VTA1-205ENST00000620996 AFTPHQ6ULP2 937 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 ZYG11AQ6WRX3 759 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 ZNF783Q6ZMS7 281 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 MCMBPQ9BTE3 642 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 C1QTNF1Q9BXJ1 281 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 LINC00597Q9H2U6 94 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 ARL8BQ9NVJ2 186 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 DOCK6Q96HP0 2047 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 ATP6V1G1O75348 118 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 PRAMEF12O95522 483 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 IGSF6O95976 241 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 LTA4HP09960 611 aaKnown RBP9.93□□□□□ -0.82
VTA1-205ENST00000620996 TFEBP19484 476 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 CES1P23141 567 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 ARRB2P32121 409 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 TRIM68Q6AZZ1 485 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 TMC5Q6UXY8 1006 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 RPS27LQ71UM5 84 aaKnown RBP9.93□□□□□ -0.82
VTA1-205ENST00000620996 LYSMD3Q7Z3D4 306 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 ANKRD49Q8WVL7 239 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 USP13Q92995 863 aaPredicted RBP9.93□□□□□ -0.82
VTA1-205ENST00000620996 ZDHHC6Q9H6R6 413 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 TDP1Q9NUW8 608 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.93□□□□□ -0.82
VTA1-205ENST00000620996 OXSMQ9NWU1 459 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 CHD7Q9P2D1 2997 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 BLOC1S6Q9UL45 172 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 MRPS23Q9Y3D9 190 aaKnown RBP9.93□□□□□ -0.82
VTA1-205ENST00000620996 COMMD10Q9Y6G5 202 aa9.93□□□□□ -0.82
VTA1-205ENST00000620996 C1orf232A0A0U1RR37 186 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 DLX3O60479 287 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 SIN3BO75182 1162 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 KRT16P08779 473 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 INO80DQ53TQ3 878 aaPredicted RBP9.92□□□□□ -0.82
VTA1-205ENST00000620996 PITRM1Q5JRX3 1037 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 ALG1LQ6GMV1 187 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 FAM45BPQ6NSW5 357 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 FAM151BQ6UXP7 276 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 FAM45AQ8TCE6 357 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 SORT1Q99523 831 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 TSC22D3Q99576 134 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 PAPOLBQ9NRJ5 636 aaKnown RBP9.92□□□□□ -0.82
VTA1-205ENST00000620996 NLE1Q9NVX2 485 aaPredicted RBP9.92□□□□□ -0.82
VTA1-205ENST00000620996 SLC30A1Q9Y6M5 507 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 KIAA1671Q9BY89 1806 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 ANAPC1Q9H1A4 1944 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 CFAP73A6NFT4 308 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 E9PBE3 544 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 KLHL41O60662 606 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 HNRNPLP14866 589 aaKnown RBP eCLIP9.92□□□□□ -0.82
VTA1-205ENST00000620996 TSPAN8P19075 237 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 RASSF2P50749 326 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 ZNF140P52738 457 aaPredicted RBP9.92□□□□□ -0.82
VTA1-205ENST00000620996 NSUN2Q08J23 767 aaKnown RBP eCLIP9.92□□□□□ -0.82
VTA1-205ENST00000620996 PTPRNQ16849 979 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 TLDC1Q6P9B6 456 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 ATG14Q6ZNE5 492 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 RIN3Q8TB24 985 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 GRIN3AQ8TCU5 1115 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 HERVK_113Q902F9 699 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 SKA1Q96BD8 255 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 ILKAPQ9H0C8 392 aaPredicted RBP9.92□□□□□ -0.82
VTA1-205ENST00000620996 SLC25A13Q9UJS0 675 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 ARHGAP26Q9UNA1 814 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 ZNF711Q9Y462 761 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 OR51B4Q9Y5P0 310 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 HCFC2Q9Y5Z7 792 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 A8MUI8 341 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 E5RI56 91 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 TRIM24O15164 1050 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 OR1I1O60431 355 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 ATP5HO75947 161 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 COL6A2P12110 1019 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 ITGB6P18564 788 aa9.92□□□□□ -0.82
VTA1-205ENST00000620996 CHRM3P20309 590 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms