RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 TCN1P20061 433 aaPredicted RBP12.4□□□□□ -0.42
CIITA-212ENST00000618207 GABRR2P28476 465 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 C1QTNF8P60827 252 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 SULT2A1Q06520 285 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 TRAF2Q12933 501 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 PSAPL1Q6NUJ1 521 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 PAQR3Q6TCH7 311 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 SDCCAG8Q86SQ7 713 aaPredicted RBP12.4□□□□□ -0.42
CIITA-212ENST00000618207 CUZD1Q86UP6 607 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 PIANPQ8IYJ0 282 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 DDI1Q8WTU0 396 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 TOP1MTQ969P6 601 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 UBXN10Q96LJ8 280 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 TRIB3Q96RU7 358 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 YME1L1Q96TA2 773 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 KLF16Q9BXK1 252 aaPredicted RBP12.4□□□□□ -0.42
CIITA-212ENST00000618207 CCDC68Q9H2F9 335 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 MMADHCQ9H3L0 296 aaPredicted RBP12.4□□□□□ -0.42
CIITA-212ENST00000618207 UNC80Q8N2C7 3258 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 ILVBLA1L0T0 632 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 STX16-NPEPL1H3BU86 382 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 NDUFS3O75489 264 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 CRTAMO95727 393 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 GFAPP14136 432 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 CSKP41240 450 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 CLNS1AP54105 237 aaKnown RBP12.4□□□□□ -0.42
CIITA-212ENST00000618207 PKNOX1P55347 436 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 NME5P56597 212 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 RHOAP61586 193 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 NSUN2Q08J23 767 aaKnown RBP eCLIP12.4□□□□□ -0.42
CIITA-212ENST00000618207 PTPRNQ16849 979 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 TAS2R42Q7RTR8 314 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 PIWIL4Q7Z3Z4 852 aaKnown RBP12.4□□□□□ -0.42
CIITA-212ENST00000618207 HS6ST3Q8IZP7 471 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 ENDOVQ8N8Q3 282 aaKnown RBP12.4□□□□□ -0.42
CIITA-212ENST00000618207 PLD4Q96BZ4 506 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 RCN3Q96D15 328 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 RPL10LQ96L21 214 aaKnown RBP12.4□□□□□ -0.42
CIITA-212ENST00000618207 NSUN5Q96P11 429 aaKnown RBP12.4□□□□□ -0.42
CIITA-212ENST00000618207 TDRD1Q9BXT4 1180 aaKnown RBP12.4□□□□□ -0.42
CIITA-212ENST00000618207 TLR9Q9NR96 1032 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 POLR3BQ9NW08 1133 aaPredicted RBP12.4□□□□□ -0.42
CIITA-212ENST00000618207 NMRK1Q9NWW6 199 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 UTP6Q9NYH9 597 aaKnown RBP12.4□□□□□ -0.42
CIITA-212ENST00000618207 STOML1Q9UBI4 398 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 GIMAP2Q9UG22 337 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 CLEC4EQ9ULY5 219 aa12.4□□□□□ -0.42
CIITA-212ENST00000618207 ZBBXA8MT70 800 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 NRG2O14511 850 aaPredicted RBP12.39□□□□□ -0.43
CIITA-212ENST00000618207 UBFD1O14562 309 aaKnown RBP12.39□□□□□ -0.43
CIITA-212ENST00000618207 CD160O95971 181 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 RBP1P09455 135 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 MYL4P12829 197 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 RAP1GDS1P52306 607 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 STC1P52823 247 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 EPHB3P54753 998 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 TIAL1Q01085 375 aaKnown RBP eCLIP12.39□□□□□ -0.43
CIITA-212ENST00000618207 PFKPQ01813 784 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 DSG1Q02413 1049 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 OR4D1Q15615 310 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 FAM45BPQ6NSW5 357 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 CNKSR3Q6P9H4 555 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 ANKRD33Q7Z3H0 272 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 CAMK1DQ8IU85 385 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 APCDD1Q8J025 514 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 SLC39A11Q8N1S5 342 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 PTGR2Q8N8N7 351 aaPredicted RBP12.39□□□□□ -0.43
CIITA-212ENST00000618207 DCBLD1Q8N8Z6 715 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 FAM45AQ8TCE6 357 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 NPAS2Q99743 824 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 COMMD8Q9NX08 183 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 CDH22Q9UJ99 828 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 PPM1HQ9ULR3 514 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 ARHGAP26Q9UNA1 814 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 INSL5Q9Y5Q6 135 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 C2orf81A6NN90 581 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 ANKRD66B4E2M5 251 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 SMAD6O43541 496 aaKnown RBP12.39□□□□□ -0.43
CIITA-212ENST00000618207 NIPSNAP2O75323 286 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 MC4RP32245 332 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 MNX1P50219 401 aaPredicted RBP12.39□□□□□ -0.43
CIITA-212ENST00000618207 PRKAA2P54646 552 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 BTKQ06187 659 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 ACAP2Q15057 778 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 GK5Q6ZS86 529 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 FATE1Q969F0 183 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 GPR21Q99679 349 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 SLC30A3Q99726 388 aa12.39□□□□□ -0.43
CIITA-212ENST00000618207 FBRSL1Q9HCM7 1045 aaKnown RBP12.39□□□□□ -0.43
CIITA-212ENST00000618207 C9JVG2 144 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 STX7O15400 261 aaKnown RBP12.38□□□□□ -0.43
CIITA-212ENST00000618207 ATP5BP06576 529 aaKnown RBP12.38□□□□□ -0.43
CIITA-212ENST00000618207 ZNF37AP17032 561 aaPredicted RBP12.38□□□□□ -0.43
CIITA-212ENST00000618207 ITGB6P18564 788 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 POLD2P49005 469 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 SLC34A1Q06495 639 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 LRRC74BQ6ZQY2 392 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 MFN1Q8IWA4 741 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 RNF168Q8IYW5 571 aaPredicted RBP12.38□□□□□ -0.43
CIITA-212ENST00000618207 ZNF483Q8TF39 744 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms