RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 IFNA7P01567 189 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 SPNP16150 400 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 ERCC2P18074 760 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 EPHX2P34913 555 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 TPMTP51580 245 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 KPNA2P52292 529 aaKnown RBP7.39□□□□□ -1.23
PDE6A-205ENST00000617647 RAB25P57735 213 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 CTBSQ01459 385 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 GRSF1Q12849 480 aaKnown RBP eCLIP7.39□□□□□ -1.23
PDE6A-205ENST00000617647 PLD1Q13393 1074 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 PIGHQ14442 188 aaPredicted RBP7.39□□□□□ -1.23
PDE6A-205ENST00000617647 CAPRIN1Q14444 709 aaKnown RBP7.39□□□□□ -1.23
PDE6A-205ENST00000617647 NHSL2Q5HYW2 709 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 ZNF57Q68EA5 555 aaPredicted RBP7.39□□□□□ -1.23
PDE6A-205ENST00000617647 PYHIN1Q6K0P9 492 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 TATDN1Q6P1N9 297 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 ARHGAP36Q6ZRI8 547 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 C15orf52Q6ZUT6 534 aaKnown RBP7.39□□□□□ -1.23
PDE6A-205ENST00000617647 LRRC8DQ7L1W4 858 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 HIPK1Q86Z02 1210 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 CPSF7Q8N684 471 aaKnown RBP7.39□□□□□ -1.23
PDE6A-205ENST00000617647 OR10T2Q8NGX3 314 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 ORAI2Q96SN7 254 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 MLPHQ9BV36 600 aaPredicted RBP7.39□□□□□ -1.23
PDE6A-205ENST00000617647 ZNF416Q9BWM5 594 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 SLC22A4Q9H015 551 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 MMP28Q9H239 520 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 NMRAL1Q9HBL8 299 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 EML4Q9HC35 981 aaKnown RBP7.39□□□□□ -1.23
PDE6A-205ENST00000617647 KCTD5Q9NXV2 234 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 RIMKLBQ9ULI2 386 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 MTF2Q9Y483 593 aaPredicted RBP7.39□□□□□ -1.23
PDE6A-205ENST00000617647 PCDHB12Q9Y5F1 795 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 PCDHA1Q9Y5I3 950 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 FAM240BA0A1B0GVZ2 78 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 WDR27A2RRH5 827 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 MEIOCA2RUB1 952 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 USP17L5A8MUK1 530 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 ERVH48-1M5A8F1 160 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 SNNO75324 88 aaPredicted RBP7.39□□□□□ -1.23
PDE6A-205ENST00000617647 MTA2O94776 668 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 KDM4BO94953 1096 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 FOSP01100 380 aaPredicted RBP7.39□□□□□ -1.23
PDE6A-205ENST00000617647 CYBBP04839 570 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 INHBBP09529 407 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 NCK1P16333 377 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 HTR1BP28222 390 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 NUP62P37198 522 aaPredicted RBP7.39□□□□□ -1.23
PDE6A-205ENST00000617647 MAP2K4P45985 399 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 GDF10P55107 478 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 SRP54P61011 504 aaKnown RBP7.39□□□□□ -1.23
PDE6A-205ENST00000617647 RPA4Q13156 261 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 NFIL3Q16649 462 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 Q3C1V9 767 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 BCL7AQ4VC05 210 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 TEX44Q53QW1 395 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 EPGNQ6UW88 154 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 ZNF600Q6ZNG1 722 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 BBS12Q6ZW61 710 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 EIF3MQ7L2H7 374 aaKnown RBP7.39□□□□□ -1.23
PDE6A-205ENST00000617647 MICALL2Q8IY33 904 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 RYBPQ8N488 228 aaPredicted RBP7.39□□□□□ -1.23
PDE6A-205ENST00000617647 C3orf58Q8NDZ4 430 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 OR9Q1Q8NGQ5 310 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 CLHC1Q8NHS4 586 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 ELMO2Q96JJ3 720 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 ZBTB18Q99592 522 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 BTBD2Q9BX70 525 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 DCP1AQ9NPI6 582 aaPredicted RBP7.39□□□□□ -1.23
PDE6A-205ENST00000617647 AKIP1Q9NQ31 210 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 PFDN2Q9UHV9 154 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 RUVBL2Q9Y230 463 aaKnown RBP7.39□□□□□ -1.23
PDE6A-205ENST00000617647 PRR23D1E9PI22 279 aaPredicted RBP7.38□□□□□ -1.23
PDE6A-205ENST00000617647 TOR1AO14656 332 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 EIF3DO15371 548 aaKnown RBP eCLIP7.38□□□□□ -1.23
PDE6A-205ENST00000617647 SGCEO43556 437 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 RGS10O43665 173 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 NOBOXO60393 691 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 LRIG2O94898 1065 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 FTH1P02794 183 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 RBP1P09455 135 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 TSPAN19P0C672 248 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 PRR23D2P0DMB1 279 aaPredicted RBP7.38□□□□□ -1.23
PDE6A-205ENST00000617647 ADORA2AP29274 412 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 FMO3P31513 532 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 KCNK10P57789 538 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 CRADDP78560 199 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 GPAT3Q53EU6 434 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 GRTP1Q5TC63 336 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 MZT2BQ6NZ67 158 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 CES3Q6UWW8 571 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 URGCPQ8TCY9 931 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 ZNF431Q8TF32 576 aaPredicted RBP7.38□□□□□ -1.23
PDE6A-205ENST00000617647 FAM162AQ96A26 154 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 SH3KBP1Q96B97 665 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 SGTBQ96EQ0 304 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 SEC22CQ9BRL7 303 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 CRISPLD2Q9H0B8 497 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 FAM83DQ9H4H8 585 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 HPF1Q9NWY4 346 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms