RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 TIMM13Q9Y5L4 95 aaPredicted RBP3.36□□□□□ -1.87
LPP-220ENST00000617246 KLK10O43240 276 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 E2F6O75461 281 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 MAP3K6O95382 1288 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 PTHP01270 115 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 TYMPP19971 482 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 IFNGR2P38484 337 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 MPLP40238 635 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 WASP42768 502 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 WDR5P61964 334 aaKnown RBP3.36□□□□□ -1.87
LPP-220ENST00000617246 PURAQ00577 322 aaKnown RBP3.36□□□□□ -1.87
LPP-220ENST00000617246 C4orf19Q8IY42 314 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 TRIB2Q92519 343 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 OTULINQ96BN8 352 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 WDR92Q96MX6 357 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 ARRDC1-AS1Q9H2J1 176 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 METTL7AQ9H8H3 244 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 SPATA7Q9P0W8 599 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 EIF3KQ9UBQ5 218 aaKnown RBP3.36□□□□□ -1.87
LPP-220ENST00000617246 SH3BGRL2Q9UJC5 107 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 DRG1Q9Y295 367 aaKnown RBP3.36□□□□□ -1.87
LPP-220ENST00000617246 MAGED1Q9Y5V3 778 aaPredicted RBP3.36□□□□□ -1.87
LPP-220ENST00000617246 hCG_1642624A0A1W2PR95 340 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 POTECB2RU33 542 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 DVL2O14641 736 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 CSDE1O75534 798 aaKnown RBP3.35□□□□□ -1.87
LPP-220ENST00000617246 AKAP3O75969 853 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 POP4O95707 220 aaKnown RBP3.35□□□□□ -1.87
LPP-220ENST00000617246 GIMD1P0DJR0 217 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 WARSP23381 471 aaKnown RBP3.35□□□□□ -1.87
LPP-220ENST00000617246 CCT5P48643 541 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 NAXDQ8IW45 347 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 DHX40Q8IX18 779 aaKnown RBP3.35□□□□□ -1.87
LPP-220ENST00000617246 RAVER1Q8IY67 606 aaKnown RBP3.35□□□□□ -1.87
LPP-220ENST00000617246 BRI3BPQ8WY22 251 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 SHC3Q92529 594 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 HHIPQ96QV1 700 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 CCNB1IP1Q9NPC3 277 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 GEMIN8Q9NWZ8 242 aaKnown RBP3.35□□□□□ -1.87
LPP-220ENST00000617246 H0Y3Z8 333 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 TOP3BO95985 862 aaKnown RBP3.35□□□□□ -1.87
LPP-220ENST00000617246 DCKP27707 260 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 HDAC1Q13547 482 aaPredicted RBP3.35□□□□□ -1.87
LPP-220ENST00000617246 AP5B1Q2VPB7 878 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 TUBB8Q3ZCM7 444 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 MSANTD2Q6P1R3 559 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 OR4K17Q8NGC6 315 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 LOXL4Q96JB6 756 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 SLC25A14O95258 325 aaPredicted RBP3.35□□□□□ -1.87
LPP-220ENST00000617246 IL32P24001 234 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 UBE2NP61088 152 aaKnown RBP3.35□□□□□ -1.87
LPP-220ENST00000617246 CYP4F8P98187 520 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 RAB39AQ14964 217 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 ADGRF1Q5T601 910 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 DCAF12L1Q5VU92 463 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 TRAPPC11Q7Z392 1133 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 NAT16Q8N8M0 369 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 TMEM121BQ9BXQ6 578 aaPredicted RBP3.35□□□□□ -1.87
LPP-220ENST00000617246 PACSIN1Q9BY11 444 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 PANK2Q9BZ23 570 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 CCSER1Q9C0I3 900 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 THAP9Q9H5L6 903 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 GAREM1Q9H706 876 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 FAM49BQ9NUQ9 324 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 SCOCQ9UIL1 159 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 RCOR1Q9UKL0 485 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 GABRQQ9UN88 632 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 CLCA3PQ9Y6N3 262 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 DUSP10Q9Y6W6 482 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 LTBP1Q14766 1721 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 PLIN4Q96Q06 1357 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 ANKRD34BA5PLL1 514 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 A6NLC8 198 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 SHMT2P34897 504 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 UGT1A5P35504 534 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 ZNF280AP59817 542 aaPredicted RBP3.35□□□□□ -1.87
LPP-220ENST00000617246 HTRA3P83110 453 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 MROH9Q5TGP6 573 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 ZNF574Q6ZN55 896 aaPredicted RBP3.35□□□□□ -1.87
LPP-220ENST00000617246 SRMSQ9H3Y6 488 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 PDLIM7Q9NR12 457 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 B4GALT6Q9UBX8 382 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 HOXB9P17482 250 aaPredicted RBP3.35□□□□□ -1.87
LPP-220ENST00000617246 DGKAP23743 735 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 SERPINB3P29508 390 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 PSPHP78330 225 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 LRRC14Q15048 493 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 SLC30A10Q6XR72 485 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 PLEKHM3Q6ZWE6 761 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 ZNF720Q7Z2F6 126 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 DENND1CQ8IV53 801 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 OR52L1Q8NGH7 329 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 UNKQ9C0B0 810 aaKnown RBP3.35□□□□□ -1.87
LPP-220ENST00000617246 ING2Q9H160 280 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 KCNF1Q9H3M0 494 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 HPS4Q9NQG7 708 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 TSR3Q9UJK0 312 aaKnown RBP3.35□□□□□ -1.87
LPP-220ENST00000617246 MAU2Q9Y6X3 613 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 NFKBIEO00221 500 aa3.35□□□□□ -1.87
LPP-220ENST00000617246 FOXP2O15409 715 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms