RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 TREHO43280 583 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 ASNA1O43681 348 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 OR10H3O60404 316 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 CST1P01037 141 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 ELNP15502 786 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 DRD4P21917 467 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 C1orf127Q8N9H9 656 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 AGAP11Q8TF27 550 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 UPF1Q92900 1129 aaKnown RBP eCLIP17.72■□□□□ 0.43
ATXN2-227ENST00000616825 NIFKQ9BYG3 293 aaKnown RBP17.72■□□□□ 0.43
ATXN2-227ENST00000616825 CLIC5Q9NZA1 410 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 RAB23Q9ULC3 237 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 MRPS7Q9Y2R9 242 aaKnown RBP17.72■□□□□ 0.43
ATXN2-227ENST00000616825 GRM6O15303 877 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 BPGMP07738 259 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 ARMC3Q5W041 872 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 ZDHHC20Q5W0Z9 365 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 IQCKQ8N0W5 287 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 PLD5Q8N7P1 536 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 OR10G6Q8NH81 332 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 DQX1Q8TE96 717 aaKnown RBP17.72■□□□□ 0.43
ATXN2-227ENST00000616825 FERD3LQ96RJ6 166 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 KCTD5Q9NXV2 234 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 MAP2P11137 1827 aaKnown RBP17.72■□□□□ 0.43
ATXN2-227ENST00000616825 BTBD19C9JJ37 291 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 NEDD8-MDP1E9PL57 170 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 H3BNH8 94 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 LRATO95237 230 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 FGF19O95750 216 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 TPSB2P20231 275 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 TPSAB1Q15661 275 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 KLHL17Q6TDP4 642 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 ISLR2Q6UXK2 745 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 DHDDSQ86SQ9 333 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 TSPAN14Q8NG11 270 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 TSSK3Q96PN8 268 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 FNDC11Q9BVV2 318 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 C3orf14Q9HBI5 128 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 RPL26L1Q9UNX3 145 aaKnown RBP17.72■□□□□ 0.43
ATXN2-227ENST00000616825 ZNF780BQ9Y6R6 833 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 OR4Q2P0C623 313 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 SPATA31D3P0C874 917 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 PSMD4P55036 377 aaKnown RBP17.72■□□□□ 0.43
ATXN2-227ENST00000616825 CRELD2Q6UXH1 353 aaPredicted RBP17.72■□□□□ 0.43
ATXN2-227ENST00000616825 SPATA31D4Q6ZUB0 917 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 SMG7Q92540 1137 aaKnown RBP17.72■□□□□ 0.43
ATXN2-227ENST00000616825 MYDGFQ969H8 173 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 GMIPQ9P107 970 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 CHN2P52757 468 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 TRIM32Q13049 653 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 ZSWIM7Q19AV6 140 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 PMF1Q6P1K2 205 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 KRT74Q7RTS7 529 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 ANKRD23Q86SG2 305 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 GPR135Q8IZ08 494 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 MAF1Q9H063 256 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 CAB39LQ9H9S4 337 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 PTGFRNQ9P2B2 879 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 PCDHA2Q9Y5H9 948 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 H3BM21 787 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 NRP2O60462 931 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 SLC25A12O75746 678 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 RPP40O75818 363 aaKnown RBP17.71■□□□□ 0.43
ATXN2-227ENST00000616825 IL12RB1P42701 662 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 UGT2B15P54855 530 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 KCNJ2P63252 427 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 SPIRE1Q08AE8 756 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 EML3Q32P44 896 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 CUZD1Q86UP6 607 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 XYLT1Q86Y38 959 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 UBASH3BQ8TF42 649 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 SLC44A1Q8WWI5 657 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 SUV39H1O43463 412 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 PPP1R11O60927 126 aaPredicted RBP17.71■□□□□ 0.43
ATXN2-227ENST00000616825 C4BPAP04003 597 aaKnown RBP17.71■□□□□ 0.43
ATXN2-227ENST00000616825 NR2F6P10588 404 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 CORO1AP31146 461 aaKnown RBP17.71■□□□□ 0.43
ATXN2-227ENST00000616825 HTR7P34969 479 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 GNPDA1P46926 289 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 MANFP55145 182 aaKnown RBP17.71■□□□□ 0.43
ATXN2-227ENST00000616825 PLPP4Q5VZY2 271 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 PTF1AQ7RTS3 328 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 FAM220AQ7Z4H9 259 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 AMIGO2Q86SJ2 522 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 CCDC185Q8N715 623 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 ZNF540Q8NDQ6 660 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 TEFMQ96QE5 360 aaKnown RBP17.71■□□□□ 0.43
ATXN2-227ENST00000616825 MECRQ9BV79 373 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 POLR1BQ9H9Y6 1135 aa17.71■□□□□ 0.43
ATXN2-227ENST00000616825 REXO2Q9Y3B8 237 aaKnown RBP17.71■□□□□ 0.43
ATXN2-227ENST00000616825 DHX15O43143 795 aaKnown RBP17.71■□□□□ 0.42
ATXN2-227ENST00000616825 KRT36O76013 467 aa17.71■□□□□ 0.42
ATXN2-227ENST00000616825 ECDO95905 644 aaPredicted RBP17.71■□□□□ 0.42
ATXN2-227ENST00000616825 TPP2P29144 1249 aaPredicted RBP17.71■□□□□ 0.42
ATXN2-227ENST00000616825 BUD31P41223 144 aaPredicted RBP17.71■□□□□ 0.42
ATXN2-227ENST00000616825 UBAP2LQ14157 1087 aaKnown RBP17.71■□□□□ 0.42
ATXN2-227ENST00000616825 RFTN2Q52LD8 501 aaPredicted RBP17.71■□□□□ 0.42
ATXN2-227ENST00000616825 RAVER1Q8IY67 606 aaKnown RBP17.71■□□□□ 0.42
ATXN2-227ENST00000616825 R3HDM2Q9Y2K5 976 aaKnown RBP17.71■□□□□ 0.42
ATXN2-227ENST00000616825 MGRN1O60291 552 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms