RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.97■□□□□ 0.63
CDX1-202ENST00000616154 MTA2O94776 668 aa18.97■□□□□ 0.63
CDX1-202ENST00000616154 AMPD1P23109 780 aa18.97■□□□□ 0.63
CDX1-202ENST00000616154 SERPINB6P35237 376 aa18.97■□□□□ 0.63
CDX1-202ENST00000616154 LY6DQ14210 128 aa18.97■□□□□ 0.63
CDX1-202ENST00000616154 LBRQ14739 615 aaKnown RBP18.97■□□□□ 0.63
CDX1-202ENST00000616154 TCEAL1Q15170 157 aa18.97■□□□□ 0.63
CDX1-202ENST00000616154 HADHQ16836 314 aaKnown RBP18.97■□□□□ 0.63
CDX1-202ENST00000616154 C14orf28Q4W4Y0 310 aa18.97■□□□□ 0.63
CDX1-202ENST00000616154 KIAA1614Q5VZ46 1190 aa18.97■□□□□ 0.63
CDX1-202ENST00000616154 PNCKQ6P2M8 343 aa18.97■□□□□ 0.63
CDX1-202ENST00000616154 SPRED1Q7Z699 444 aa18.97■□□□□ 0.63
CDX1-202ENST00000616154 LRRC49Q8IUZ0 686 aa18.97■□□□□ 0.63
CDX1-202ENST00000616154 COQ10AQ96MF6 247 aa18.97■□□□□ 0.63
CDX1-202ENST00000616154 CHP1Q99653 195 aa18.97■□□□□ 0.63
CDX1-202ENST00000616154 LGR4Q9BXB1 951 aa18.97■□□□□ 0.63
CDX1-202ENST00000616154 TMEM168Q9H0V1 697 aa18.97■□□□□ 0.63
CDX1-202ENST00000616154 CTTNBP2NLQ9P2B4 639 aa18.97■□□□□ 0.63
CDX1-202ENST00000616154 B4GALT6Q9UBX8 382 aa18.97■□□□□ 0.63
CDX1-202ENST00000616154 A0A1W2PQ67 120 aa18.96■□□□□ 0.63
CDX1-202ENST00000616154 PDE2AO00408 941 aaPredicted RBP18.96■□□□□ 0.63
CDX1-202ENST00000616154 HTRA2O43464 458 aaPredicted RBP18.96■□□□□ 0.63
CDX1-202ENST00000616154 AKR1B10O60218 316 aa18.96■□□□□ 0.63
CDX1-202ENST00000616154 MAFKO60675 156 aa18.96■□□□□ 0.63
CDX1-202ENST00000616154 SOCS5O75159 536 aa18.96■□□□□ 0.63
CDX1-202ENST00000616154 HGFP14210 728 aa18.96■□□□□ 0.63
CDX1-202ENST00000616154 CR2P20023 1033 aa18.96■□□□□ 0.63
CDX1-202ENST00000616154 HSPA9P38646 679 aaKnown RBP18.96■□□□□ 0.63
CDX1-202ENST00000616154 ZFP36L1Q07352 338 aaKnown RBP18.96■□□□□ 0.63
CDX1-202ENST00000616154 SLC10A7Q0GE19 358 aa18.96■□□□□ 0.63
CDX1-202ENST00000616154 HLTFQ14527 1009 aaKnown RBP eCLIP18.96■□□□□ 0.63
CDX1-202ENST00000616154 ACOX1Q15067 660 aa18.96■□□□□ 0.63
CDX1-202ENST00000616154 JAMLQ86YT9 394 aa18.96■□□□□ 0.63
CDX1-202ENST00000616154 TMTC1Q8IUR5 882 aa18.96■□□□□ 0.63
CDX1-202ENST00000616154 SFTPA2Q8IWL1 248 aa18.96■□□□□ 0.63
CDX1-202ENST00000616154 PELI3Q8N2H9 469 aa18.96■□□□□ 0.63
CDX1-202ENST00000616154 Q8N9G6 341 aaPredicted RBP18.96■□□□□ 0.63
CDX1-202ENST00000616154 CCDC112Q8NEF3 446 aa18.96■□□□□ 0.63
CDX1-202ENST00000616154 TMEM159Q96B96 161 aa18.96■□□□□ 0.63
CDX1-202ENST00000616154 FAF2Q96CS3 445 aa18.96■□□□□ 0.63
CDX1-202ENST00000616154 BAG1Q99933 345 aaPredicted RBP18.96■□□□□ 0.63
CDX1-202ENST00000616154 ZNF670Q9BS34 389 aa18.96■□□□□ 0.63
CDX1-202ENST00000616154 DEF6Q9H4E7 631 aa18.96■□□□□ 0.63
CDX1-202ENST00000616154 NHEJ1Q9H9Q4 299 aaPredicted RBP18.96■□□□□ 0.63
CDX1-202ENST00000616154 CYP4F12Q9HCS2 524 aa18.96■□□□□ 0.63
CDX1-202ENST00000616154 LOXL2Q9Y4K0 774 aa18.96■□□□□ 0.63
CDX1-202ENST00000616154 RNF215Q9Y6U7 377 aa18.96■□□□□ 0.63
CDX1-202ENST00000616154 PRSS38A1L453 326 aa18.95■□□□□ 0.62
CDX1-202ENST00000616154 A8MX80 341 aa18.95■□□□□ 0.62
CDX1-202ENST00000616154 B4DGG1 531 aa18.95■□□□□ 0.62
CDX1-202ENST00000616154 NUDT21O43809 227 aaKnown RBP18.95■□□□□ 0.62
CDX1-202ENST00000616154 JMJD7P0C870 316 aa18.95■□□□□ 0.62
CDX1-202ENST00000616154 MYCLP1P12525 358 aaPredicted RBP18.95■□□□□ 0.62
CDX1-202ENST00000616154 CDH6P55285 790 aa18.95■□□□□ 0.62
CDX1-202ENST00000616154 CCZ1BP86790 482 aa18.95■□□□□ 0.62
CDX1-202ENST00000616154 CCZ1P86791 482 aaPredicted RBP18.95■□□□□ 0.62
CDX1-202ENST00000616154 DPYSL3Q14195 570 aa18.95■□□□□ 0.62
CDX1-202ENST00000616154 ZNF235Q14590 738 aa18.95■□□□□ 0.62
CDX1-202ENST00000616154 NUS1Q96E22 293 aa18.95■□□□□ 0.62
CDX1-202ENST00000616154 MED8Q96G25 268 aa18.95■□□□□ 0.62
CDX1-202ENST00000616154 CCDC42Q96M95 316 aa18.95■□□□□ 0.62
CDX1-202ENST00000616154 DPEP2Q9H4A9 486 aa18.95■□□□□ 0.62
CDX1-202ENST00000616154 KCTD5Q9NXV2 234 aa18.95■□□□□ 0.62
CDX1-202ENST00000616154 LRIT1Q9P2V4 623 aa18.95■□□□□ 0.62
CDX1-202ENST00000616154 PISDQ9UG56 409 aa18.95■□□□□ 0.62
CDX1-202ENST00000616154 INTUQ9ULD6 942 aa18.95■□□□□ 0.62
CDX1-202ENST00000616154 J3QKU1 62 aa18.94■□□□□ 0.62
CDX1-202ENST00000616154 NVLO15381 856 aaKnown RBP18.94■□□□□ 0.62
CDX1-202ENST00000616154 KRT7P08729 469 aa18.94■□□□□ 0.62
CDX1-202ENST00000616154 CD48P09326 243 aa18.94■□□□□ 0.62
CDX1-202ENST00000616154 VIPR1P32241 457 aa18.94■□□□□ 0.62
CDX1-202ENST00000616154 ARHGEF7Q14155 803 aa18.94■□□□□ 0.62
CDX1-202ENST00000616154 PAFAH1B3Q15102 231 aaKnown RBP18.94■□□□□ 0.62
CDX1-202ENST00000616154 PDK2Q15119 407 aa18.94■□□□□ 0.62
CDX1-202ENST00000616154 CNGA3Q16281 694 aa18.94■□□□□ 0.62
CDX1-202ENST00000616154 CPNE8Q86YQ8 564 aa18.94■□□□□ 0.62
CDX1-202ENST00000616154 CCDC170Q8IYT3 715 aa18.94■□□□□ 0.62
CDX1-202ENST00000616154 CCL4L1Q8NHW4 92 aa18.94■□□□□ 0.62
CDX1-202ENST00000616154 KIAA1524Q8TCG1 905 aa18.94■□□□□ 0.62
CDX1-202ENST00000616154 FATE1Q969F0 183 aa18.94■□□□□ 0.62
CDX1-202ENST00000616154 NUDCD1Q96RS6 583 aa18.94■□□□□ 0.62
CDX1-202ENST00000616154 MGME1Q9BQP7 344 aa18.94■□□□□ 0.62
CDX1-202ENST00000616154 TEX101Q9BY14 249 aa18.94■□□□□ 0.62
CDX1-202ENST00000616154 KCNF1Q9H3M0 494 aa18.94■□□□□ 0.62
CDX1-202ENST00000616154 PHPT1Q9NRX4 125 aaPredicted RBP18.94■□□□□ 0.62
CDX1-202ENST00000616154 MOSPD1Q9UJG1 213 aa18.94■□□□□ 0.62
CDX1-202ENST00000616154 PCDHGC4Q9Y5F7 938 aa18.94■□□□□ 0.62
CDX1-202ENST00000616154 TTC24A2A3L6 582 aaPredicted RBP18.93■□□□□ 0.62
CDX1-202ENST00000616154 ZNF487B1APH4 448 aa18.93■□□□□ 0.62
CDX1-202ENST00000616154 EFSO43281 561 aa18.93■□□□□ 0.62
CDX1-202ENST00000616154 HEXIM1O94992 359 aaKnown RBP18.93■□□□□ 0.62
CDX1-202ENST00000616154 LCA5LO95447 670 aa18.93■□□□□ 0.62
CDX1-202ENST00000616154 CPP00450 1065 aa18.93■□□□□ 0.62
CDX1-202ENST00000616154 LIPCP11150 499 aa18.93■□□□□ 0.62
CDX1-202ENST00000616154 NFKBIAP25963 317 aa18.93■□□□□ 0.62
CDX1-202ENST00000616154 ARHGAP25P42331 645 aa18.93■□□□□ 0.62
CDX1-202ENST00000616154 TAS2R40P59535 323 aa18.93■□□□□ 0.62
CDX1-202ENST00000616154 KRT81Q14533 505 aa18.93■□□□□ 0.62
CDX1-202ENST00000616154 RALGPS1Q5JS13 557 aa18.93■□□□□ 0.62
CDX1-202ENST00000616154 HEATR4Q86WZ0 1026 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms