RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 RPL26L1Q9UNX3 145 aaKnown RBP8.05□□□□□ -1.12
PCDH9-205ENST00000614931 INVSQ9Y283 1065 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 NFS1Q9Y697 457 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 WDR87Q6ZQQ6 2873 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 DMDP11532 3685 aa8.05□□□□□ -1.12
PCDH9-205ENST00000614931 TP53BP1Q12888 1972 aaPredicted RBP8.04□□□□□ -1.12
PCDH9-205ENST00000614931 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.04□□□□□ -1.12
PCDH9-205ENST00000614931 FAM237BA0A1B0GVD1 139 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 TCRBV9S1A1TA0A576 114 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 TCRBV21S2A2A0A5A6 115 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 OR51F1A6NGY5 319 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 A8MX80 341 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 GAPDHSO14556 408 aaPredicted RBP8.04□□□□□ -1.12
PCDH9-205ENST00000614931 SLC30A4O14863 429 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 AREL1O15033 823 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 GDF9O60383 454 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 UGT1A9O60656 530 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 USP1O94782 785 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 CLDN7O95471 211 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 GABRG2P18507 467 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 NDUFV2P19404 249 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 BCKDHBP21953 392 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 PSMA3P25788 255 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 GCAP28676 217 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 CA5AP35218 305 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 MMP12P39900 470 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 MPLP40238 635 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 EPHB1P54762 984 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 CNTN1Q12860 1018 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 SLC29A2Q14542 456 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 CASP8Q14790 479 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 SF3A2Q15428 464 aaKnown RBP8.04□□□□□ -1.12
PCDH9-205ENST00000614931 TAF1AQ15573 450 aaPredicted RBP8.04□□□□□ -1.12
PCDH9-205ENST00000614931 CST6Q15828 149 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 CCDC6Q16204 474 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 CNGA3Q16281 694 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 UGP2Q16851 508 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 MAP7D1Q3KQU3 841 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 PIP5KL1Q5T9C9 394 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 AGBL4Q5VU57 503 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 PMS2CLQ68D20 193 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 ZNF776Q68DI1 518 aaPredicted RBP8.04□□□□□ -1.12
PCDH9-205ENST00000614931 BRAT1Q6PJG6 821 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 CRTC1Q6UUV9 634 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 GLT6D1Q7Z4J2 308 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 TMEM135Q86UB9 458 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 PNPLA1Q8N8W4 532 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 PPHLN1Q8NEY8 458 aaKnown RBP8.04□□□□□ -1.12
PCDH9-205ENST00000614931 BRSK1Q8TDC3 778 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 FBF1Q8TES7 1133 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 RLN3Q8WXF3 142 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 LRIG1Q96JA1 1093 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 ZIM3Q96PE6 472 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 LYSMD1Q96S90 227 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 ADGRE3Q9BY15 652 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 TSPYL1Q9H0U9 437 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 PABPC3Q9H361 631 aaKnown RBP8.04□□□□□ -1.12
PCDH9-205ENST00000614931 VPS37BQ9H9H4 285 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 UGT1A7Q9HAW7 530 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 UGT1A10Q9HAW8 530 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 UGT1A8Q9HAW9 530 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 ARGLU1Q9NWB6 273 aaPredicted RBP8.04□□□□□ -1.12
PCDH9-205ENST00000614931 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.04□□□□□ -1.12
PCDH9-205ENST00000614931 RABGEF1Q9UJ41 708 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 PLAAQ9Y263 795 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 RPS6KL1Q9Y6S9 549 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 FAM169AQ9Y6X4 670 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 SPAG17Q6Q759 2223 aa8.04□□□□□ -1.12
PCDH9-205ENST00000614931 C1orf232A0A0U1RR37 186 aa8.03□□□□□ -1.12
PCDH9-205ENST00000614931 A0A1W2PP55 124 aa8.03□□□□□ -1.12
PCDH9-205ENST00000614931 MED19A0JLT2 244 aaPredicted RBP8.03□□□□□ -1.12
PCDH9-205ENST00000614931 HEATR9A2RTY3 570 aa8.03□□□□□ -1.12
PCDH9-205ENST00000614931 FAM159BA6NKW6 160 aa8.03□□□□□ -1.12
PCDH9-205ENST00000614931 CXorf49A8MYA2 514 aaPredicted RBP8.03□□□□□ -1.12
PCDH9-205ENST00000614931 GOLGA8KD6RF30 607 aa8.03□□□□□ -1.12
PCDH9-205ENST00000614931 C1QTNF3-AMACRE9PGA6 284 aa8.03□□□□□ -1.12
PCDH9-205ENST00000614931 GOLGA8TH3BQL2 631 aa8.03□□□□□ -1.12
PCDH9-205ENST00000614931 AP3B1O00203 1094 aa8.03□□□□□ -1.12
PCDH9-205ENST00000614931 MAP2K7O14733 419 aa8.03□□□□□ -1.12
PCDH9-205ENST00000614931 SYNCRIPO60506 623 aaKnown RBP8.03□□□□□ -1.12
PCDH9-205ENST00000614931 ABHD2P08910 425 aa8.03□□□□□ -1.12
PCDH9-205ENST00000614931 PRSS56P0CW18 603 aa8.03□□□□□ -1.12
PCDH9-205ENST00000614931 C7P10643 843 aa8.03□□□□□ -1.12
PCDH9-205ENST00000614931 ADRB3P13945 408 aa8.03□□□□□ -1.12
PCDH9-205ENST00000614931 TSHRP16473 764 aa8.03□□□□□ -1.12
PCDH9-205ENST00000614931 VIPR1P32241 457 aa8.03□□□□□ -1.12
PCDH9-205ENST00000614931 ARCN1P48444 511 aaKnown RBP8.03□□□□□ -1.12
PCDH9-205ENST00000614931 LIMK1P53667 647 aa8.03□□□□□ -1.12
PCDH9-205ENST00000614931 TAS2R38P59533 333 aa8.03□□□□□ -1.12
PCDH9-205ENST00000614931 TMPRSS15P98073 1019 aa8.03□□□□□ -1.12
PCDH9-205ENST00000614931 CREB5Q02930 508 aa8.03□□□□□ -1.12
PCDH9-205ENST00000614931 ACVR1Q04771 509 aa8.03□□□□□ -1.12
PCDH9-205ENST00000614931 STARD3Q14849 445 aa8.03□□□□□ -1.12
PCDH9-205ENST00000614931 SPANXN3Q5MJ09 141 aa8.03□□□□□ -1.12
PCDH9-205ENST00000614931 SPDYCQ5MJ68 293 aa8.03□□□□□ -1.12
PCDH9-205ENST00000614931 CFAP58Q5T655 872 aa8.03□□□□□ -1.12
PCDH9-205ENST00000614931 LRRC66Q68CR7 880 aa8.03□□□□□ -1.12
PCDH9-205ENST00000614931 KIAA0930Q6ICG6 404 aaPredicted RBP8.03□□□□□ -1.12
PCDH9-205ENST00000614931 SDE2Q6IQ49 451 aa8.03□□□□□ -1.12
PCDH9-205ENST00000614931 CEP128Q6ZU80 1094 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms