RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 AQP12BA6NM10 295 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 H0Y858 1186 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 PRAMEF10O60809 474 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 SREBF2Q12772 1141 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 ACOX1Q15067 660 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 ATAD3CQ5T2N8 411 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 SVBPQ8N300 66 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 MCMBPQ9BTE3 642 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 LIN7BQ9HAP6 207 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 GJB4Q9NTQ9 266 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 COX16Q9P0S2 106 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 RP2O75695 350 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 SLC2A2P11168 524 aaPredicted RBP4.95□□□□□ -1.62
VPS13D-213ENST00000613099 CHRNEQ04844 493 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 RNF212Q495C1 297 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 PAPD4Q6PIY7 484 aaKnown RBP4.95□□□□□ -1.62
VPS13D-213ENST00000613099 ADGRF2Q8IZF7 708 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 GPD1LQ8N335 351 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 BAZ2AQ9UIF9 1905 aaKnown RBP4.95□□□□□ -1.62
VPS13D-213ENST00000613099 BPGMP07738 259 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 MBL2P11226 248 aaPredicted RBP4.95□□□□□ -1.62
VPS13D-213ENST00000613099 MTHFD1P11586 935 aaKnown RBP4.95□□□□□ -1.62
VPS13D-213ENST00000613099 JUPP14923 745 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 ALDH7A1P49419 539 aaKnown RBP4.95□□□□□ -1.62
VPS13D-213ENST00000613099 ALDH3A2P51648 485 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 FKBP1AP62942 108 aaKnown RBP4.95□□□□□ -1.62
VPS13D-213ENST00000613099 C1orf189Q5VU69 101 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 CASP12Q6UXS9 341 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 BANPQ8N9N5 519 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 PANX3Q96QZ0 392 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 THAP2Q9H0W7 228 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 ZNF609O15014 1411 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 CLUHO75153 1309 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 TRAPPC13A5PLN9 417 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 C6orf229H3BNL8 230 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 ZNF182P17025 639 aaPredicted RBP4.95□□□□□ -1.62
VPS13D-213ENST00000613099 KIZQ2M2Z5 673 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 HEATR6Q6AI08 1181 aaKnown RBP4.95□□□□□ -1.62
VPS13D-213ENST00000613099 COQ10AQ96MF6 247 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 NOX1Q9Y5S8 564 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 USP6P35125 1406 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 FUCA1P04066 466 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 THEGLP0DJG4 465 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 NCS1P62166 190 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 SLC3A1Q07837 685 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 MOGSQ13724 837 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 STXBP2Q15833 593 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 CYP4Z1Q86W10 505 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 OR5T1Q8NG75 326 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 THAP6Q8TBB0 222 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 RAD18Q9NS91 495 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 TAS2R7Q9NYW3 318 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 ZBTB24O43167 697 aaPredicted RBP4.95□□□□□ -1.62
VPS13D-213ENST00000613099 PROM1O43490 865 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 HPCAL1P37235 193 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 GCLMP48507 274 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 ZNF81P51508 661 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 RNF4P78317 190 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 FAM187BQ17R55 369 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 ATP6AP1LQ52LC2 224 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 ZBED3Q96IU2 234 aaPredicted RBP4.95□□□□□ -1.62
VPS13D-213ENST00000613099 MRIQ9BWK5 157 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 ATP13A2Q9NQ11 1180 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 TMEM59LQ9UK28 342 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 RPH3AQ9Y2J0 694 aaPredicted RBP4.95□□□□□ -1.62
VPS13D-213ENST00000613099 NUMBLQ9Y6R0 609 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 TOPAZ1Q8N9V7 1692 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 ADGRB1O14514 1584 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 NEURL1BA8MQ27 555 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 PSAPP07602 524 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 P2RX3P56373 397 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 LRRC38Q5VT99 294 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 NAPRTQ6XQN6 538 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 RYBPQ8N488 228 aaPredicted RBP4.95□□□□□ -1.62
VPS13D-213ENST00000613099 C15orf40Q8WUR7 153 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 VPS9D1Q9Y2B5 631 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 MAU2Q9Y6X3 613 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 ADGRB2O60241 1585 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 MRPS14O60783 128 aaKnown RBP4.95□□□□□ -1.62
VPS13D-213ENST00000613099 ITGAVP06756 1048 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 SMIM11AP58511 58 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 TIGD6Q17RP2 521 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 FEZF2Q8TBJ5 459 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 ROPN1LQ96C74 230 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 RCN3Q96D15 328 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 CLIP3Q96DZ5 547 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.95□□□□□ -1.62
VPS13D-213ENST00000613099 HCN3Q9P1Z3 774 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 ACOT9Q9Y305 439 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 M0R036 132 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 SULT1C2O00338 296 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 TIPRLO75663 272 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 PGLSO95336 258 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 HNMTP50135 292 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 ERVK-25P63136 954 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 SNTA1Q13424 505 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 PKN1Q16512 942 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 PXDC1Q5TGL8 231 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 ANKS1BQ7Z6G8 1248 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 ZBTB46Q86UZ6 589 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms