RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 CBARPQ8N350 705 aaPredicted RBP23.39■■□□□ 1.33
MMP28-203ENST00000612672 AGBL5Q8NDL9 886 aa23.39■■□□□ 1.33
MMP28-203ENST00000612672 DTD2Q96FN9 168 aa23.39■■□□□ 1.33
MMP28-203ENST00000612672 CNPY3Q9BT09 278 aa23.39■■□□□ 1.33
MMP28-203ENST00000612672 PHPT1Q9NRX4 125 aaPredicted RBP23.39■■□□□ 1.33
MMP28-203ENST00000612672 SLC39A1Q9NY26 324 aa23.39■■□□□ 1.33
MMP28-203ENST00000612672 TUBD1Q9UJT1 453 aa23.39■■□□□ 1.33
MMP28-203ENST00000612672 PILRAQ9UKJ1 303 aa23.39■■□□□ 1.33
MMP28-203ENST00000612672 AP4E1Q9UPM8 1137 aa23.39■■□□□ 1.33
MMP28-203ENST00000612672 SIK3Q9Y2K2 1263 aa23.39■■□□□ 1.33
MMP28-203ENST00000612672 LOC101059948A0A1B0GTJ6 334 aa23.38■■□□□ 1.33
MMP28-203ENST00000612672 ARHGAP42A6NI28 874 aa23.38■■□□□ 1.33
MMP28-203ENST00000612672 EFCAB7A8K855 629 aa23.38■■□□□ 1.33
MMP28-203ENST00000612672 HEXIM1O94992 359 aaKnown RBP23.38■■□□□ 1.33
MMP28-203ENST00000612672 EML2O95834 649 aa23.38■■□□□ 1.33
MMP28-203ENST00000612672 SOD1P00441 154 aa23.38■■□□□ 1.33
MMP28-203ENST00000612672 PRKAR1AP10644 381 aa23.38■■□□□ 1.33
MMP28-203ENST00000612672 GP1BBP13224 206 aa23.38■■□□□ 1.33
MMP28-203ENST00000612672 ERCC5P28715 1186 aaPredicted RBP23.38■■□□□ 1.33
MMP28-203ENST00000612672 CCR10P46092 362 aa23.38■■□□□ 1.33
MMP28-203ENST00000612672 AIF1P55008 147 aa23.38■■□□□ 1.33
MMP28-203ENST00000612672 ATP1A1-AS1Q5TC04 95 aa23.38■■□□□ 1.33
MMP28-203ENST00000612672 CYP4V2Q6ZWL3 525 aaPredicted RBP23.38■■□□□ 1.33
MMP28-203ENST00000612672 TIPARPQ7Z3E1 657 aaKnown RBP23.38■■□□□ 1.33
MMP28-203ENST00000612672 FAM129CQ86XR2 697 aa23.38■■□□□ 1.33
MMP28-203ENST00000612672 FNIP1Q8TF40 1166 aa23.38■■□□□ 1.33
MMP28-203ENST00000612672 CTRCQ99895 268 aa23.38■■□□□ 1.33
MMP28-203ENST00000612672 SEPT3Q9UH03 358 aa23.38■■□□□ 1.33
MMP28-203ENST00000612672 SLC17A4Q9Y2C5 497 aa23.38■■□□□ 1.33
MMP28-203ENST00000612672 MAN2B2Q9Y2E5 1009 aa23.38■■□□□ 1.33
MMP28-203ENST00000612672 PCDHGC4Q9Y5F7 938 aa23.38■■□□□ 1.33
MMP28-203ENST00000612672 PCYT1BQ9Y5K3 369 aaPredicted RBP23.38■■□□□ 1.33
MMP28-203ENST00000612672 ICE1Q9Y2F5 2266 aa23.37■■□□□ 1.33
MMP28-203ENST00000612672 ZNF891A8MT65 544 aaPredicted RBP23.37■■□□□ 1.33
MMP28-203ENST00000612672 DFFAO00273 331 aa23.37■■□□□ 1.33
MMP28-203ENST00000612672 EEF2KO00418 725 aaKnown RBP23.37■■□□□ 1.33
MMP28-203ENST00000612672 HTRA2O43464 458 aaPredicted RBP23.37■■□□□ 1.33
MMP28-203ENST00000612672 OAS2P29728 719 aaKnown RBP23.37■■□□□ 1.33
MMP28-203ENST00000612672 UBE2HP62256 183 aa23.37■■□□□ 1.33
MMP28-203ENST00000612672 NSUN2Q08J23 767 aaKnown RBP eCLIP23.37■■□□□ 1.33
MMP28-203ENST00000612672 SLC10A7Q0GE19 358 aa23.37■■□□□ 1.33
MMP28-203ENST00000612672 SQSTM1Q13501 440 aa23.37■■□□□ 1.33
MMP28-203ENST00000612672 DOK6Q6PKX4 331 aa23.37■■□□□ 1.33
MMP28-203ENST00000612672 TSPAN33Q86UF1 283 aa23.37■■□□□ 1.33
MMP28-203ENST00000612672 PGBD5Q8N414 524 aa23.37■■□□□ 1.33
MMP28-203ENST00000612672 RTP4Q96DX8 246 aa23.37■■□□□ 1.33
MMP28-203ENST00000612672 SLC45A3Q96JT2 553 aa23.37■■□□□ 1.33
MMP28-203ENST00000612672 SMIM14Q96QK8 99 aa23.37■■□□□ 1.33
MMP28-203ENST00000612672 SNRNP25Q9BV90 132 aaKnown RBP23.37■■□□□ 1.33
MMP28-203ENST00000612672 CLSTN2Q9H4D0 955 aa23.37■■□□□ 1.33
MMP28-203ENST00000612672 DHX35Q9H5Z1 703 aaKnown RBP23.37■■□□□ 1.33
MMP28-203ENST00000612672 SP110Q9HB58 689 aa23.37■■□□□ 1.33
MMP28-203ENST00000612672 PLAAQ9Y263 795 aa23.37■■□□□ 1.33
MMP28-203ENST00000612672 NOTCH2Q04721 2471 aa23.37■■□□□ 1.33
MMP28-203ENST00000612672 ZNF106Q9H2Y7 1883 aaKnown RBP23.36■■□□□ 1.33
MMP28-203ENST00000612672 NPIPB15A6NHN6 443 aaPredicted RBP23.36■■□□□ 1.33
MMP28-203ENST00000612672 B4E171 279 aa23.36■■□□□ 1.33
MMP28-203ENST00000612672 PDE2AO00408 941 aaPredicted RBP23.36■■□□□ 1.33
MMP28-203ENST00000612672 ERCC2P18074 760 aa23.36■■□□□ 1.33
MMP28-203ENST00000612672 EEF1GP26641 437 aaKnown RBP23.36■■□□□ 1.33
MMP28-203ENST00000612672 VIPR1P32241 457 aa23.36■■□□□ 1.33
MMP28-203ENST00000612672 CSTF2P33240 577 aaKnown RBP eCLIP23.36■■□□□ 1.33
MMP28-203ENST00000612672 TSPAN7P41732 249 aa23.36■■□□□ 1.33
MMP28-203ENST00000612672 ACTR1BP42025 376 aa23.36■■□□□ 1.33
MMP28-203ENST00000612672 ACTR1AP61163 376 aa23.36■■□□□ 1.33
MMP28-203ENST00000612672 AP1S1P61966 158 aa23.36■■□□□ 1.33
MMP28-203ENST00000612672 TRAF2Q12933 501 aa23.36■■□□□ 1.33
MMP28-203ENST00000612672 KRT31Q15323 416 aa23.36■■□□□ 1.33
MMP28-203ENST00000612672 Q6ZVL8 140 aa23.36■■□□□ 1.33
MMP28-203ENST00000612672 TRIM74Q86UV6 250 aa23.36■■□□□ 1.33
MMP28-203ENST00000612672 PAF1Q8N7H5 531 aa23.36■■□□□ 1.33
MMP28-203ENST00000612672 SPOCK2Q92563 424 aa23.36■■□□□ 1.33
MMP28-203ENST00000612672 RNF31Q96EP0 1072 aa23.36■■□□□ 1.33
MMP28-203ENST00000612672 PSKH2Q96QS6 385 aa23.36■■□□□ 1.33
MMP28-203ENST00000612672 APMAPQ9HDC9 416 aa23.36■■□□□ 1.33
MMP28-203ENST00000612672 KCNK4Q9NYG8 393 aa23.36■■□□□ 1.33
MMP28-203ENST00000612672 TRBV23OR9-2A0A075B6M9 112 aa23.35■■□□□ 1.33
MMP28-203ENST00000612672 PEX11BO96011 259 aa23.35■■□□□ 1.33
MMP28-203ENST00000612672 IVLP07476 585 aa23.35■■□□□ 1.33
MMP28-203ENST00000612672 HTR7P34969 479 aa23.35■■□□□ 1.33
MMP28-203ENST00000612672 POLR2LP62875 67 aaKnown RBP23.35■■□□□ 1.33
MMP28-203ENST00000612672 IL10RBQ08334 325 aa23.35■■□□□ 1.33
MMP28-203ENST00000612672 CDC20Q12834 499 aa23.35■■□□□ 1.33
MMP28-203ENST00000612672 BECN1Q14457 450 aa23.35■■□□□ 1.33
MMP28-203ENST00000612672 TMEM71Q6P5X7 295 aa23.35■■□□□ 1.33
MMP28-203ENST00000612672 RFX8Q6ZV50 586 aa23.35■■□□□ 1.33
MMP28-203ENST00000612672 C9orf43Q8TAL5 461 aaPredicted RBP23.35■■□□□ 1.33
MMP28-203ENST00000612672 SLC37A2Q8TED4 501 aa23.35■■□□□ 1.33
MMP28-203ENST00000612672 SCARF2Q96GP6 870 aaPredicted RBP23.35■■□□□ 1.33
MMP28-203ENST00000612672 SEPT11Q9NVA2 429 aaKnown RBP23.35■■□□□ 1.33
MMP28-203ENST00000612672 TAS2R14Q9NYV8 317 aa23.35■■□□□ 1.33
MMP28-203ENST00000612672 PDP2Q9P2J9 529 aa23.35■■□□□ 1.33
MMP28-203ENST00000612672 ANAPC2Q9UJX6 822 aa23.35■■□□□ 1.33
MMP28-203ENST00000612672 TMEM98Q9Y2Y6 226 aa23.35■■□□□ 1.33
MMP28-203ENST00000612672 GOLGA6CA6NDK9 693 aa23.34■■□□□ 1.33
MMP28-203ENST00000612672 GOLGA6BA6NDN3 693 aa23.34■■□□□ 1.33
MMP28-203ENST00000612672 ATMINO43313 823 aaPredicted RBP23.34■■□□□ 1.33
MMP28-203ENST00000612672 CPP00450 1065 aa23.34■■□□□ 1.33
MMP28-203ENST00000612672 GOLGA6DP0CG33 693 aa23.34■■□□□ 1.33
MMP28-203ENST00000612672 NR1D1P20393 614 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms