RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 TSPAN33Q86UF1 283 aa8.1□□□□□ -1.11
TARDBP-213ENST00000611963 DENND6AQ8IWF6 608 aa8.1□□□□□ -1.11
TARDBP-213ENST00000611963 SUGP1Q8IWZ8 645 aaKnown RBP8.1□□□□□ -1.11
TARDBP-213ENST00000611963 STK40Q8N2I9 435 aa8.1□□□□□ -1.11
TARDBP-213ENST00000611963 TMEM105Q8N8V8 129 aa8.1□□□□□ -1.11
TARDBP-213ENST00000611963 ANKRD42Q8N9B4 389 aa8.1□□□□□ -1.11
TARDBP-213ENST00000611963 OR6P1Q8NGX9 317 aa8.1□□□□□ -1.11
TARDBP-213ENST00000611963 MGARPQ8TDB4 240 aa8.1□□□□□ -1.11
TARDBP-213ENST00000611963 CSGALNACT1Q8TDX6 532 aa8.1□□□□□ -1.11
TARDBP-213ENST00000611963 STYXQ8WUJ0 223 aa8.1□□□□□ -1.11
TARDBP-213ENST00000611963 ECHDC3Q96DC8 303 aa8.1□□□□□ -1.11
TARDBP-213ENST00000611963 FAM122AQ96E09 287 aa8.1□□□□□ -1.11
TARDBP-213ENST00000611963 TBATAQ96M53 351 aa8.1□□□□□ -1.11
TARDBP-213ENST00000611963 CPNE1Q99829 537 aa8.1□□□□□ -1.11
TARDBP-213ENST00000611963 HEPHQ9BQS7 1158 aa8.1□□□□□ -1.11
TARDBP-213ENST00000611963 CPEB1Q9BZB8 566 aaKnown RBP8.1□□□□□ -1.11
TARDBP-213ENST00000611963 GPR63Q9BZJ6 419 aa8.1□□□□□ -1.11
TARDBP-213ENST00000611963 KCNH6Q9H252 994 aa8.1□□□□□ -1.11
TARDBP-213ENST00000611963 MFSD1Q9H3U5 465 aa8.1□□□□□ -1.11
TARDBP-213ENST00000611963 FBRSL1Q9HCM7 1045 aaKnown RBP8.1□□□□□ -1.11
TARDBP-213ENST00000611963 BPIFA1Q9NP55 256 aa8.1□□□□□ -1.11
TARDBP-213ENST00000611963 KCNK9Q9NPC2 374 aa8.1□□□□□ -1.11
TARDBP-213ENST00000611963 FBXO6Q9NRD1 293 aaPredicted RBP8.1□□□□□ -1.11
TARDBP-213ENST00000611963 CACNA2D2Q9NY47 1150 aa8.1□□□□□ -1.11
TARDBP-213ENST00000611963 MARCH4Q9P2E8 410 aaPredicted RBP8.1□□□□□ -1.11
TARDBP-213ENST00000611963 TXNDC16Q9P2K2 825 aa8.1□□□□□ -1.11
TARDBP-213ENST00000611963 PLA2G4CQ9UP65 541 aa8.1□□□□□ -1.11
TARDBP-213ENST00000611963 SLC8A2Q9UPR5 921 aa8.1□□□□□ -1.11
TARDBP-213ENST00000611963 FNDC3AQ9Y2H6 1198 aaKnown RBP8.1□□□□□ -1.11
TARDBP-213ENST00000611963 PLXNA2O75051 1894 aa8.1□□□□□ -1.11
TARDBP-213ENST00000611963 C1orf232A0A0U1RR37 186 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 EDDM13A0A1B0GTR0 161 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 TMEM120BA0PK00 339 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 KRBA1A5PL33 1030 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 CAPN8A6NHC0 703 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 NPIPB15A6NHN6 443 aaPredicted RBP8.09□□□□□ -1.11
TARDBP-213ENST00000611963 C2orf81A6NN90 581 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 STX7O15400 261 aaKnown RBP8.09□□□□□ -1.11
TARDBP-213ENST00000611963 SLC7A4O43246 635 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 TIMM44O43615 452 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 PI15O43692 258 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 KRT37O76014 449 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 KRT38O76015 456 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 CRTAMO95727 393 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 GOT2P00505 430 aaKnown RBP8.09□□□□□ -1.11
TARDBP-213ENST00000611963 ITGA2BP08514 1039 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 SRFP11831 508 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 BRAFP15056 766 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 KRT4P19013 534 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 LPOP22079 712 aaPredicted RBP8.09□□□□□ -1.11
TARDBP-213ENST00000611963 GABRB3P28472 473 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 HNF1BP35680 557 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 GMPRP36959 345 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 EIF2DP41214 584 aaKnown RBP8.09□□□□□ -1.11
TARDBP-213ENST00000611963 GRIA2P42262 883 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 IL12RB1P42701 662 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 WASP42768 502 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 GALK1P51570 392 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 METAP1P53582 386 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 CSE1LP55060 971 aaKnown RBP8.09□□□□□ -1.11
TARDBP-213ENST00000611963 SEC13P55735 322 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 RPL26P61254 145 aaKnown RBP8.09□□□□□ -1.11
TARDBP-213ENST00000611963 NHLH1Q02575 133 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 ACVR1Q04771 509 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 CTBP1Q13363 440 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 MPP2Q14168 576 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 EIF4HQ15056 248 aaKnown RBP8.09□□□□□ -1.11
TARDBP-213ENST00000611963 HNRNPA1L2Q32P51 320 aaKnown RBP8.09□□□□□ -1.11
TARDBP-213ENST00000611963 ZNF789Q5FWF6 425 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 GRTP1Q5TC63 336 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 TXNDC11Q6PKC3 985 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 BRICD5Q6PL45 260 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 SERPINA13PQ6UXR4 307 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 CNTN4Q8IWV2 1026 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 DCLK2Q8N568 766 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 C2CD4AQ8NCU7 369 aaPredicted RBP8.09□□□□□ -1.11
TARDBP-213ENST00000611963 ACVR1CQ8NER5 493 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 UCMAQ8WVF2 138 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 PTPRN2Q92932 1015 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 EID2BQ96D98 161 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 PKNOX2Q96KN3 472 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 ZNF641Q96N77 438 aaPredicted RBP8.09□□□□□ -1.11
TARDBP-213ENST00000611963 ACOX2Q99424 681 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 RBBP8Q99708 897 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 FAM167BQ9BTA0 163 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 SLC6A16Q9GZN6 736 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 MLXIPLQ9NP71 852 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 NLE1Q9NVX2 485 aaPredicted RBP8.09□□□□□ -1.11
TARDBP-213ENST00000611963 HACD3Q9P035 362 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 IL36AQ9UHA7 158 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 FKBPLQ9UIM3 349 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 ADAM21Q9UKJ8 722 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 FBXO5Q9UKT4 447 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 RIMKLBQ9ULI2 386 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 RPL26L1Q9UNX3 145 aaKnown RBP8.09□□□□□ -1.11
TARDBP-213ENST00000611963 MTO1Q9Y2Z2 717 aaKnown RBP8.09□□□□□ -1.11
TARDBP-213ENST00000611963 ACTL7BQ9Y614 415 aa8.09□□□□□ -1.11
TARDBP-213ENST00000611963 UPK3BL1B0FP48 263 aa8.08□□□□□ -1.12
TARDBP-213ENST00000611963 UPK3BL2E5RIL1 263 aa8.08□□□□□ -1.12
TARDBP-213ENST00000611963 SPECC1L-ADORA2AF8WAN1 911 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms