RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 TP53INP2Q8IXH6 220 aa21.81■■□□□ 1.08
CBWD3-207ENST00000611426 RHOT1Q8IXI2 618 aa21.81■■□□□ 1.08
CBWD3-207ENST00000611426 KATNAL2Q8IYT4 538 aa21.81■■□□□ 1.08
CBWD3-207ENST00000611426 ZNF248Q8NDW4 579 aa21.81■■□□□ 1.08
CBWD3-207ENST00000611426 HSPH1Q92598 858 aa21.81■■□□□ 1.08
CBWD3-207ENST00000611426 GRAMD1AQ96CP6 724 aa21.81■■□□□ 1.08
CBWD3-207ENST00000611426 WDR92Q96MX6 357 aa21.81■■□□□ 1.08
CBWD3-207ENST00000611426 ZNF599Q96NL3 588 aa21.81■■□□□ 1.08
CBWD3-207ENST00000611426 PSKH2Q96QS6 385 aa21.81■■□□□ 1.08
CBWD3-207ENST00000611426 LGMNQ99538 433 aa21.81■■□□□ 1.08
CBWD3-207ENST00000611426 PRORYQ9H606 182 aa21.81■■□□□ 1.08
CBWD3-207ENST00000611426 KLQ9UEF7 1012 aa21.81■■□□□ 1.08
CBWD3-207ENST00000611426 BPTFQ12830 3046 aa21.81■■□□□ 1.08
CBWD3-207ENST00000611426 CCDC188H7C350 402 aa21.8■■□□□ 1.08
CBWD3-207ENST00000611426 DXOO77932 396 aaKnown RBP21.8■■□□□ 1.08
CBWD3-207ENST00000611426 RECQL5O94762 991 aaPredicted RBP21.8■■□□□ 1.08
CBWD3-207ENST00000611426 ELFN1P0C7U0 828 aa21.8■■□□□ 1.08
CBWD3-207ENST00000611426 AMPD1P23109 780 aa21.8■■□□□ 1.08
CBWD3-207ENST00000611426 PCBP4P57723 403 aaKnown RBP21.8■■□□□ 1.08
CBWD3-207ENST00000611426 AP1S1P61966 158 aa21.8■■□□□ 1.08
CBWD3-207ENST00000611426 SLC10A7Q0GE19 358 aa21.8■■□□□ 1.08
CBWD3-207ENST00000611426 RALGDSQ12967 914 aa21.8■■□□□ 1.08
CBWD3-207ENST00000611426 NAA30Q147X3 362 aaPredicted RBP21.8■■□□□ 1.08
CBWD3-207ENST00000611426 DPYSL2Q16555 572 aa21.8■■□□□ 1.08
CBWD3-207ENST00000611426 TMCO4Q5TGY1 634 aa21.8■■□□□ 1.08
CBWD3-207ENST00000611426 LIPIQ6XZB0 460 aa21.8■■□□□ 1.08
CBWD3-207ENST00000611426 GKN2Q86XP6 184 aa21.8■■□□□ 1.08
CBWD3-207ENST00000611426 SDR16C5Q8N3Y7 309 aa21.8■■□□□ 1.08
CBWD3-207ENST00000611426 PLA2G15Q8NCC3 412 aa21.8■■□□□ 1.08
CBWD3-207ENST00000611426 CCDC3Q9BQI4 270 aa21.8■■□□□ 1.08
CBWD3-207ENST00000611426 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.8■■□□□ 1.08
CBWD3-207ENST00000611426 SIRPGQ9P1W8 387 aa21.8■■□□□ 1.08
CBWD3-207ENST00000611426 A8MX80 341 aa21.79■■□□□ 1.08
CBWD3-207ENST00000611426 TRAFD1O14545 582 aaPredicted RBP21.79■■□□□ 1.08
CBWD3-207ENST00000611426 TCEA3O75764 348 aa21.79■■□□□ 1.08
CBWD3-207ENST00000611426 TNFP01375 233 aa21.79■■□□□ 1.08
CBWD3-207ENST00000611426 ERVPABLB-1P60509 514 aa21.79■■□□□ 1.08
CBWD3-207ENST00000611426 ZNF235Q14590 738 aa21.79■■□□□ 1.08
CBWD3-207ENST00000611426 PPP2R5EQ16537 467 aa21.79■■□□□ 1.08
CBWD3-207ENST00000611426 GLE1Q53GS7 698 aaKnown RBP21.79■■□□□ 1.08
CBWD3-207ENST00000611426 C3orf38Q5JPI3 329 aa21.79■■□□□ 1.08
CBWD3-207ENST00000611426 TMCO3Q6UWJ1 677 aa21.79■■□□□ 1.08
CBWD3-207ENST00000611426 SPACA3Q8IXA5 215 aa21.79■■□□□ 1.08
CBWD3-207ENST00000611426 ARL10Q8N8L6 244 aa21.79■■□□□ 1.08
CBWD3-207ENST00000611426 PCDH19Q8TAB3 1148 aa21.79■■□□□ 1.08
CBWD3-207ENST00000611426 WDR48Q8TAF3 677 aa21.79■■□□□ 1.08
CBWD3-207ENST00000611426 ATXN7L3BQ96GX2 97 aa21.79■■□□□ 1.08
CBWD3-207ENST00000611426 NAF1Q96HR8 494 aaKnown RBP21.79■■□□□ 1.08
CBWD3-207ENST00000611426 NSMCE3Q96MG7 304 aa21.79■■□□□ 1.08
CBWD3-207ENST00000611426 FCRL3Q96P31 734 aaPredicted RBP21.79■■□□□ 1.08
CBWD3-207ENST00000611426 UBL7Q96S82 380 aaPredicted RBP21.79■■□□□ 1.08
CBWD3-207ENST00000611426 SYNDIG1Q9H7V2 258 aa21.79■■□□□ 1.08
CBWD3-207ENST00000611426 SATB2Q9UPW6 733 aa21.79■■□□□ 1.08
CBWD3-207ENST00000611426 ENTPD2Q9Y5L3 495 aa21.79■■□□□ 1.08
CBWD3-207ENST00000611426 SHROOM3Q8TF72 1996 aa21.79■■□□□ 1.08
CBWD3-207ENST00000611426 PTPRQQ9UMZ3 2332 aa21.79■■□□□ 1.08
CBWD3-207ENST00000611426 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.78■■□□□ 1.08
CBWD3-207ENST00000611426 TTC24A2A3L6 582 aaPredicted RBP21.78■■□□□ 1.08
CBWD3-207ENST00000611426 CACNB4O00305 520 aaPredicted RBP21.78■■□□□ 1.08
CBWD3-207ENST00000611426 RARAP10276 462 aa21.78■■□□□ 1.08
CBWD3-207ENST00000611426 TCF4P15884 667 aa21.78■■□□□ 1.08
CBWD3-207ENST00000611426 TLE3Q04726 772 aa21.78■■□□□ 1.08
CBWD3-207ENST00000611426 DPPA4Q7L190 304 aa21.78■■□□□ 1.08
CBWD3-207ENST00000611426 EXD1Q8NHP7 514 aa21.78■■□□□ 1.08
CBWD3-207ENST00000611426 HIC2Q96JB3 615 aa21.78■■□□□ 1.08
CBWD3-207ENST00000611426 CSPG4P5Q96PW8 444 aa21.78■■□□□ 1.08
CBWD3-207ENST00000611426 THSD1Q9NS62 852 aa21.78■■□□□ 1.08
CBWD3-207ENST00000611426 ETNK2Q9NVF9 386 aa21.78■■□□□ 1.08
CBWD3-207ENST00000611426 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.78■■□□□ 1.08
CBWD3-207ENST00000611426 GPR34Q9UPC5 381 aa21.78■■□□□ 1.08
CBWD3-207ENST00000611426 V9GYY5 206 aaPredicted RBP21.78■■□□□ 1.08
CBWD3-207ENST00000611426 RBMS1P29558 406 aaKnown RBP21.77■■□□□ 1.08
CBWD3-207ENST00000611426 TAS2R40P59535 323 aa21.77■■□□□ 1.08
CBWD3-207ENST00000611426 SPIDRQ14159 915 aa21.77■■□□□ 1.08
CBWD3-207ENST00000611426 ACOX1Q15067 660 aa21.77■■□□□ 1.08
CBWD3-207ENST00000611426 SEL1L2Q5TEA6 688 aa21.77■■□□□ 1.08
CBWD3-207ENST00000611426 BBS5Q8N3I7 341 aa21.77■■□□□ 1.08
CBWD3-207ENST00000611426 KYQ8NBH2 561 aa21.77■■□□□ 1.08
CBWD3-207ENST00000611426 OR56A4Q8NGH8 313 aa21.77■■□□□ 1.08
CBWD3-207ENST00000611426 PDCD6IPQ8WUM4 868 aaKnown RBP21.77■■□□□ 1.08
CBWD3-207ENST00000611426 FUBP1Q96AE4 644 aaKnown RBP21.77■■□□□ 1.08
CBWD3-207ENST00000611426 ANKZF1Q9H8Y5 726 aa21.77■■□□□ 1.08
CBWD3-207ENST00000611426 SMARCAL1Q9NZC9 954 aa21.77■■□□□ 1.08
CBWD3-207ENST00000611426 RAB21Q9UL25 225 aa21.77■■□□□ 1.08
CBWD3-207ENST00000611426 PCDHGC4Q9Y5F7 938 aa21.77■■□□□ 1.08
CBWD3-207ENST00000611426 COL27A1Q8IZC6 1860 aaPredicted RBP21.77■■□□□ 1.07
CBWD3-207ENST00000611426 A0A1W2PQ67 120 aa21.76■■□□□ 1.07
CBWD3-207ENST00000611426 TMEM202A6NGA9 273 aa21.76■■□□□ 1.07
CBWD3-207ENST00000611426 CASC3O15234 703 aaKnown RBP21.76■■□□□ 1.07
CBWD3-207ENST00000611426 FGGP02679 453 aa21.76■■□□□ 1.07
CBWD3-207ENST00000611426 PYGMP11217 842 aa21.76■■□□□ 1.07
CBWD3-207ENST00000611426 KELP23276 732 aa21.76■■□□□ 1.07
CBWD3-207ENST00000611426 PTPN7P35236 360 aa21.76■■□□□ 1.07
CBWD3-207ENST00000611426 HSPA9P38646 679 aaKnown RBP21.76■■□□□ 1.07
CBWD3-207ENST00000611426 KIAA1024LP59773 190 aa21.76■■□□□ 1.07
CBWD3-207ENST00000611426 C2orf54Q08AI8 447 aa21.76■■□□□ 1.07
CBWD3-207ENST00000611426 NSMCE1Q8WV22 266 aa21.76■■□□□ 1.07
CBWD3-207ENST00000611426 PDXPQ96GD0 296 aa21.76■■□□□ 1.07
CBWD3-207ENST00000611426 RBM15Q96T37 977 aaKnown RBP eCLIP21.76■■□□□ 1.07
CBWD3-207ENST00000611426 ASCL3Q9NQ33 180 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms