RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 SEC13P55735 322 aa15.64■□□□□ 0.09
TNXB-208ENST00000611016 RTL3Q8N8U3 475 aaKnown RBP15.64■□□□□ 0.09
TNXB-208ENST00000611016 DNAJB14Q8TBM8 379 aa15.64■□□□□ 0.09
TNXB-208ENST00000611016 ARHGEF3Q9NR81 526 aa15.64■□□□□ 0.09
TNXB-208ENST00000611016 NDRG2Q9UN36 371 aaKnown RBP15.64■□□□□ 0.09
TNXB-208ENST00000611016 FSCN2O14926 492 aa15.64■□□□□ 0.09
TNXB-208ENST00000611016 SYN3O14994 580 aa15.64■□□□□ 0.09
TNXB-208ENST00000611016 LIPMQ5VYY2 423 aa15.64■□□□□ 0.09
TNXB-208ENST00000611016 PTCD2Q8WV60 388 aaKnown RBP15.64■□□□□ 0.09
TNXB-208ENST00000611016 TNKS2Q9H2K2 1166 aa15.64■□□□□ 0.09
TNXB-208ENST00000611016 RAI2Q9Y5P3 530 aa15.64■□□□□ 0.09
TNXB-208ENST00000611016 ZFP37Q9Y6Q3 630 aaPredicted RBP15.64■□□□□ 0.09
TNXB-208ENST00000611016 LRATO95237 230 aa15.64■□□□□ 0.09
TNXB-208ENST00000611016 HNRNPLP14866 589 aaKnown RBP eCLIP15.64■□□□□ 0.09
TNXB-208ENST00000611016 PTPN2P17706 415 aa15.64■□□□□ 0.09
TNXB-208ENST00000611016 AUHQ13825 339 aaKnown RBP15.64■□□□□ 0.09
TNXB-208ENST00000611016 AAGABQ6PD74 315 aa15.64■□□□□ 0.09
TNXB-208ENST00000611016 PEG10Q86TG7 708 aaKnown RBP15.64■□□□□ 0.09
TNXB-208ENST00000611016 C6orf62Q9GZU0 229 aaPredicted RBP15.64■□□□□ 0.09
TNXB-208ENST00000611016 DHX33Q9H6R0 707 aaKnown RBP15.64■□□□□ 0.09
TNXB-208ENST00000611016 CAB39LQ9H9S4 337 aa15.64■□□□□ 0.09
TNXB-208ENST00000611016 CA12O43570 354 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 PCCBP05166 539 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 SERPINA6P08185 405 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 COX4I1P13073 169 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 RPL17P18621 184 aaKnown RBP15.63■□□□□ 0.09
TNXB-208ENST00000611016 ENPEPQ07075 957 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 PPIDQ08752 370 aaKnown RBP15.63■□□□□ 0.09
TNXB-208ENST00000611016 TRIM25Q14258 630 aaKnown RBP15.63■□□□□ 0.09
TNXB-208ENST00000611016 BROXQ5VW32 411 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 CLVS1Q8IUQ0 354 aaPredicted RBP15.63■□□□□ 0.09
TNXB-208ENST00000611016 SIX5Q8N196 739 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 BEND7Q8N7W2 519 aaPredicted RBP15.63■□□□□ 0.09
TNXB-208ENST00000611016 KBTBD8Q8NFY9 601 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 WDR60Q8WVS4 1066 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 ACBD6Q9BR61 282 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 POLR1BQ9H9Y6 1135 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 ZNF780BQ9Y6R6 833 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 TRBV23OR9-2A0A075B6M9 112 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 IDO1P14902 403 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 KLHL35Q6PF15 583 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 C2orf73Q8N5S3 287 aaPredicted RBP15.63■□□□□ 0.09
TNXB-208ENST00000611016 ITGB1BP2Q9UKP3 347 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 GTPBP1O00178 669 aaKnown RBP15.63■□□□□ 0.09
TNXB-208ENST00000611016 SNX3O60493 162 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 KRT33AO76009 404 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 UNC5CO95185 931 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 MMP8P22894 467 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 ZNF280AP59817 542 aaPredicted RBP15.63■□□□□ 0.09
TNXB-208ENST00000611016 ZNF57Q68EA5 555 aaPredicted RBP15.63■□□□□ 0.09
TNXB-208ENST00000611016 KRT77Q7Z794 578 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 OR4K2Q8NGD2 314 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 SNX27Q96L92 541 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 TTLL2Q9BWV7 592 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 OGNP20774 298 aaKnown RBP15.63■□□□□ 0.09
TNXB-208ENST00000611016 FGFR3P22607 806 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 TEX44Q53QW1 395 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 VARS2Q5ST30 1063 aaKnown RBP15.63■□□□□ 0.09
TNXB-208ENST00000611016 IRGQQ8WZA9 623 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 PCED1BQ96HM7 432 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 RNPEPL1Q9HAU8 725 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.63■□□□□ 0.09
TNXB-208ENST00000611016 IL12RB1P42701 662 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 CHN2P52757 468 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 PSMD4P55036 377 aaKnown RBP15.63■□□□□ 0.09
TNXB-208ENST00000611016 ERVK-21P61565 698 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 CRHR2Q13324 411 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 FAAH2Q6GMR7 532 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 PRSS55Q6UWB4 352 aaPredicted RBP15.63■□□□□ 0.09
TNXB-208ENST00000611016 KIAA0408Q6ZU52 694 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 DQX1Q8TE96 717 aaKnown RBP15.63■□□□□ 0.09
TNXB-208ENST00000611016 MUC13Q9H3R2 512 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 RHBDL2Q9NX52 303 aa15.63■□□□□ 0.09
TNXB-208ENST00000611016 HDAC3O15379 428 aa15.62■□□□□ 0.09
TNXB-208ENST00000611016 TEX28O15482 410 aa15.62■□□□□ 0.09
TNXB-208ENST00000611016 MFSD11O43934 449 aa15.62■□□□□ 0.09
TNXB-208ENST00000611016 ZMPSTE24O75844 475 aa15.62■□□□□ 0.09
TNXB-208ENST00000611016 OR6B1O95007 311 aa15.62■□□□□ 0.09
TNXB-208ENST00000611016 TGDSO95455 350 aa15.62■□□□□ 0.09
TNXB-208ENST00000611016 ADSSP30520 456 aa15.62■□□□□ 0.09
TNXB-208ENST00000611016 MRPS22P82650 360 aaKnown RBP15.62■□□□□ 0.09
TNXB-208ENST00000611016 PTSQ03393 145 aa15.62■□□□□ 0.09
TNXB-208ENST00000611016 MTAPQ13126 283 aa15.62■□□□□ 0.09
TNXB-208ENST00000611016 ARL14EPQ8N8R7 260 aaPredicted RBP15.62■□□□□ 0.09
TNXB-208ENST00000611016 STON1Q9Y6Q2 735 aa15.62■□□□□ 0.09
TNXB-208ENST00000611016 NPEPPSL1A6NEC2 478 aa15.62■□□□□ 0.09
TNXB-208ENST00000611016 RHOQP17081 205 aa15.62■□□□□ 0.09
TNXB-208ENST00000611016 NDUFAF6Q330K2 333 aa15.62■□□□□ 0.09
TNXB-208ENST00000611016 RINLQ6ZS11 566 aa15.62■□□□□ 0.09
TNXB-208ENST00000611016 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.62■□□□□ 0.09
TNXB-208ENST00000611016 ASZ1Q8WWH4 475 aa15.62■□□□□ 0.09
TNXB-208ENST00000611016 RPP40O75818 363 aaKnown RBP15.62■□□□□ 0.09
TNXB-208ENST00000611016 COL6A2P12110 1019 aa15.62■□□□□ 0.09
TNXB-208ENST00000611016 ELP6Q0PNE2 266 aa15.62■□□□□ 0.09
TNXB-208ENST00000611016 NEDD8Q15843 81 aa15.62■□□□□ 0.09
TNXB-208ENST00000611016 KCTD19Q17RG1 926 aaPredicted RBP15.62■□□□□ 0.09
TNXB-208ENST00000611016 ABRAXAS1Q6UWZ7 409 aa15.62■□□□□ 0.09
TNXB-208ENST00000611016 PACS1Q6VY07 963 aa15.62■□□□□ 0.09
TNXB-208ENST00000611016 SNRNP27Q8WVK2 155 aaKnown RBP15.62■□□□□ 0.09
TNXB-208ENST00000611016 SCLYQ96I15 445 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms