RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 ATP6V1B2P21281 511 aa7.28□□□□□ -1.24
CSDE1-218ENST00000610726 SLC1A2P43004 574 aa7.28□□□□□ -1.24
CSDE1-218ENST00000610726 HCAR3P49019 387 aa7.28□□□□□ -1.24
CSDE1-218ENST00000610726 SH3BGRP55822 239 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-218ENST00000610726 WDR4P57081 412 aaKnown RBP7.28□□□□□ -1.24
CSDE1-218ENST00000610726 ZNF252P-AS1Q0IIN9 211 aa7.28□□□□□ -1.24
CSDE1-218ENST00000610726 WASHC5Q12768 1159 aa7.28□□□□□ -1.24
CSDE1-218ENST00000610726 GPM6BQ13491 265 aa7.28□□□□□ -1.24
CSDE1-218ENST00000610726 FAM46CQ5VWP2 391 aa7.28□□□□□ -1.24
CSDE1-218ENST00000610726 TMEM154Q6P9G4 183 aa7.28□□□□□ -1.24
CSDE1-218ENST00000610726 PSRC1Q6PGN9 363 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-218ENST00000610726 ZNF621Q6ZSS3 439 aa7.28□□□□□ -1.24
CSDE1-218ENST00000610726 GPRIN3Q6ZVF9 776 aa7.28□□□□□ -1.24
CSDE1-218ENST00000610726 CUZD1Q86UP6 607 aa7.28□□□□□ -1.24
CSDE1-218ENST00000610726 LRRTM3Q86VH5 581 aa7.28□□□□□ -1.24
CSDE1-218ENST00000610726 SYT12Q8IV01 421 aa7.28□□□□□ -1.24
CSDE1-218ENST00000610726 CENPLQ8N0S6 344 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-218ENST00000610726 CLYBLQ8N0X4 340 aa7.28□□□□□ -1.24
CSDE1-218ENST00000610726 FSTL5Q8N475 847 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-218ENST00000610726 ZNF555Q8NEP9 628 aa7.28□□□□□ -1.24
CSDE1-218ENST00000610726 PYDC1Q8WXC3 89 aa7.28□□□□□ -1.24
CSDE1-218ENST00000610726 OTUB1Q96FW1 271 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-218ENST00000610726 CNBD2Q96M20 576 aa7.28□□□□□ -1.24
CSDE1-218ENST00000610726 GATA5Q9BWX5 397 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-218ENST00000610726 C1QTNF7Q9BXJ2 289 aa7.28□□□□□ -1.24
CSDE1-218ENST00000610726 EIF2B3Q9NR50 452 aaKnown RBP7.28□□□□□ -1.24
CSDE1-218ENST00000610726 TMLHEQ9NVH6 421 aa7.28□□□□□ -1.24
CSDE1-218ENST00000610726 TRPC4Q9UBN4 977 aa7.28□□□□□ -1.24
CSDE1-218ENST00000610726 SLC12A4Q9UP95 1085 aa7.28□□□□□ -1.24
CSDE1-218ENST00000610726 TRAF6Q9Y4K3 522 aa7.28□□□□□ -1.24
CSDE1-218ENST00000610726 ASB3Q9Y575 518 aa7.28□□□□□ -1.24
CSDE1-218ENST00000610726 TIMM22Q9Y584 194 aa7.28□□□□□ -1.24
CSDE1-218ENST00000610726 SCN7AQ01118 1682 aa7.27□□□□□ -1.24
CSDE1-218ENST00000610726 MYO18AQ92614 2054 aaKnown RBP7.27□□□□□ -1.24
CSDE1-218ENST00000610726 INPPL1O15357 1258 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 ENTPD5O75356 428 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 POP4O95707 220 aaKnown RBP7.27□□□□□ -1.25
CSDE1-218ENST00000610726 MLYCDO95822 493 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 ZCCHC18P0CG32 403 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 S100A3P33764 101 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 TM4SF4P48230 202 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 DGKGP49619 791 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 AP1S1P61966 158 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 RPL38P63173 70 aaKnown RBP7.27□□□□□ -1.25
CSDE1-218ENST00000610726 MRPS22P82650 360 aaKnown RBP7.27□□□□□ -1.25
CSDE1-218ENST00000610726 DMC1Q14565 340 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 PAFAH1B3Q15102 231 aaKnown RBP7.27□□□□□ -1.25
CSDE1-218ENST00000610726 TCEAL1Q15170 157 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 TBCELQ5QJ74 424 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 CAPRIN2Q6IMN6 1127 aaKnown RBP7.27□□□□□ -1.25
CSDE1-218ENST00000610726 KIAA0408Q6ZU52 694 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 RGL4Q8IZJ4 473 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 TNIP2Q8NFZ5 429 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 DNAJB14Q8TBM8 379 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 INPP5DQ92835 1189 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 AP2M1Q96CW1 435 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 CCDC3Q9BQI4 270 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 FAM83DQ9H4H8 585 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 ZNF556Q9HAH1 456 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 PNPLA8Q9NP80 782 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.27□□□□□ -1.25
CSDE1-218ENST00000610726 GPSM3Q9Y4H4 160 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 INSL5Q9Y5Q6 135 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 LAMA4Q16363 1823 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.27□□□□□ -1.25
CSDE1-218ENST00000610726 KANSL1LA0AUZ9 987 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 CCDC162PA2VCL2 907 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 NEMP2A6NFY4 417 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 SAC3D1A6NKF1 404 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 WDR47O94967 919 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 FGF19O95750 216 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 ALBP02768 609 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 FTH1P02794 183 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 COX4I1P13073 169 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 CDH2P19022 906 aaPredicted RBP7.27□□□□□ -1.25
CSDE1-218ENST00000610726 MSX2P35548 267 aaPredicted RBP7.27□□□□□ -1.25
CSDE1-218ENST00000610726 SPAM1P38567 509 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 CNTN1Q12860 1018 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 MAD2L1Q13257 205 aaPredicted RBP7.27□□□□□ -1.25
CSDE1-218ENST00000610726 OTUD3Q5T2D3 398 aaPredicted RBP7.27□□□□□ -1.25
CSDE1-218ENST00000610726 MSANTD2Q6P1R3 559 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 IZUMO2Q6UXV1 221 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.27□□□□□ -1.257e-9■■■□□ 18.5
CSDE1-218ENST00000610726 ZBTB49Q6ZSB9 765 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 TP53INP2Q8IXH6 220 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 TTC9BQ8N6N2 239 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 BANPQ8N9N5 519 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 C3orf58Q8NDZ4 430 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 GPR156Q8NFN8 814 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 RDH11Q8TC12 318 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 NSMCE2Q96MF7 247 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 SH3GL1Q99961 368 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 AHSPQ9NZD4 102 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 SLC2A6Q9UGQ3 507 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 GJD2Q9UKL4 321 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 SQORQ9Y6N5 450 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 MYH7BA7E2Y1 1941 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 A0A0D9SEW6 157 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 SLC7A4O43246 635 aa7.27□□□□□ -1.25
CSDE1-218ENST00000610726 MAGEC1O60732 1142 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms