RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 TMA16Q96EY4 203 aaKnown RBP28.02■■■□□ 2.08
CSPG5-205ENST00000610462 SMIM14Q96QK8 99 aa28.02■■■□□ 2.08
CSPG5-205ENST00000610462 GSTO2Q9H4Y5 243 aa28.02■■■□□ 2.08
CSPG5-205ENST00000610462 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP28.02■■■□□ 2.08
CSPG5-205ENST00000610462 OR51B4Q9Y5P0 310 aa28.02■■■□□ 2.08
CSPG5-205ENST00000610462 TEX28O15482 410 aa28.01■■■□□ 2.07
CSPG5-205ENST00000610462 RPSAP08865 295 aaKnown RBP28.01■■■□□ 2.07
CSPG5-205ENST00000610462 HDCP19113 662 aa28.01■■■□□ 2.07
CSPG5-205ENST00000610462 PEX6Q13608 980 aa28.01■■■□□ 2.07
CSPG5-205ENST00000610462 TXNDC8Q6A555 127 aa28.01■■■□□ 2.07
CSPG5-205ENST00000610462 CUZD1Q86UP6 607 aa28.01■■■□□ 2.07
CSPG5-205ENST00000610462 LPGAT1Q92604 370 aa28.01■■■□□ 2.07
CSPG5-205ENST00000610462 N4BP2L2Q92802 583 aaPredicted RBP28.01■■■□□ 2.07
CSPG5-205ENST00000610462 RSRC1Q96IZ7 334 aaKnown RBP28.01■■■□□ 2.07
CSPG5-205ENST00000610462 CATSPER2Q96P56 530 aa28.01■■■□□ 2.07
CSPG5-205ENST00000610462 ZBED2Q9BTP6 218 aa28.01■■■□□ 2.07
CSPG5-205ENST00000610462 TRMOQ9BU70 441 aa28.01■■■□□ 2.07
CSPG5-205ENST00000610462 VPS28Q9UK41 221 aa28.01■■■□□ 2.07
CSPG5-205ENST00000610462 G3BP2Q9UN86 482 aaKnown RBP28.01■■■□□ 2.07
CSPG5-205ENST00000610462 LRRC42Q9Y546 428 aa28.01■■■□□ 2.07
CSPG5-205ENST00000610462 CPQQ9Y646 472 aa28.01■■■□□ 2.07
CSPG5-205ENST00000610462 SMIM24O75264 130 aa28.01■■■□□ 2.07
CSPG5-205ENST00000610462 WDR5P61964 334 aaKnown RBP28.01■■■□□ 2.07
CSPG5-205ENST00000610462 ZXDBP98169 803 aa28.01■■■□□ 2.07
CSPG5-205ENST00000610462 ZNF678Q5SXM1 525 aa28.01■■■□□ 2.07
CSPG5-205ENST00000610462 DEFB107AQ8IZN7 70 aa28.01■■■□□ 2.07
CSPG5-205ENST00000610462 RP9Q8TA86 221 aaKnown RBP28.01■■■□□ 2.07
CSPG5-205ENST00000610462 POLR3BQ9NW08 1133 aaPredicted RBP28.01■■■□□ 2.07
CSPG5-205ENST00000610462 UBA6A0AVT1 1052 aaPredicted RBP28■■■□□ 2.07
CSPG5-205ENST00000610462 TBX10O75333 385 aa28■■■□□ 2.07
CSPG5-205ENST00000610462 TMEM198Q66K66 360 aa28■■■□□ 2.07
CSPG5-205ENST00000610462 MYLK4Q86YV6 388 aaPredicted RBP28■■■□□ 2.07
CSPG5-205ENST00000610462 ZNF570Q96NI8 536 aa28■■■□□ 2.07
CSPG5-205ENST00000610462 NDUFS3O75489 264 aa27.99■■■□□ 2.07
CSPG5-205ENST00000610462 ABL2P42684 1182 aa27.99■■■□□ 2.07
CSPG5-205ENST00000610462 RPS27LQ71UM5 84 aaKnown RBP27.99■■■□□ 2.07
CSPG5-205ENST00000610462 SNX32Q86XE0 403 aa27.99■■■□□ 2.07
CSPG5-205ENST00000610462 FAM217AQ8IXS0 508 aa27.99■■■□□ 2.07
CSPG5-205ENST00000610462 GPR65Q8IYL9 337 aa27.99■■■□□ 2.07
CSPG5-205ENST00000610462 CEP70Q8NHQ1 597 aa27.99■■■□□ 2.07
CSPG5-205ENST00000610462 DTX3LQ8TDB6 740 aa27.99■■■□□ 2.07
CSPG5-205ENST00000610462 ALG14Q96F25 216 aa27.99■■■□□ 2.07
CSPG5-205ENST00000610462 VPS51Q9UID3 782 aa27.99■■■□□ 2.07
CSPG5-205ENST00000610462 CDH22Q9UJ99 828 aa27.99■■■□□ 2.07
CSPG5-205ENST00000610462 LILRB3O75022 631 aa27.99■■■□□ 2.07
CSPG5-205ENST00000610462 RHOBTB1O94844 696 aa27.99■■■□□ 2.07
CSPG5-205ENST00000610462 FMO4P31512 558 aa27.99■■■□□ 2.07
CSPG5-205ENST00000610462 CSKP41240 450 aa27.99■■■□□ 2.07
CSPG5-205ENST00000610462 SESN3P58005 492 aa27.99■■■□□ 2.07
CSPG5-205ENST00000610462 RHOAP61586 193 aa27.99■■■□□ 2.07
CSPG5-205ENST00000610462 HERC3Q15034 1050 aa27.99■■■□□ 2.07
CSPG5-205ENST00000610462 KIRREL3Q8IZU9 778 aa27.99■■■□□ 2.07
CSPG5-205ENST00000610462 RYBPQ8N488 228 aaPredicted RBP27.99■■■□□ 2.07
CSPG5-205ENST00000610462 RHEBL1Q8TAI7 183 aa27.99■■■□□ 2.07
CSPG5-205ENST00000610462 CCDC68Q9H2F9 335 aa27.99■■■□□ 2.07
CSPG5-205ENST00000610462 TFB2MQ9H5Q4 396 aaKnown RBP27.99■■■□□ 2.07
CSPG5-205ENST00000610462 SYTL2Q9HCH5 934 aa27.99■■■□□ 2.07
CSPG5-205ENST00000610462 TNFRSF12AQ9NP84 129 aa27.99■■■□□ 2.07
CSPG5-205ENST00000610462 ASB3Q9Y575 518 aa27.99■■■□□ 2.07
CSPG5-205ENST00000610462 SPATA31D3P0C874 917 aa27.98■■■□□ 2.07
CSPG5-205ENST00000610462 TAF11Q15544 211 aa27.98■■■□□ 2.07
CSPG5-205ENST00000610462 ZRSR2Q15696 482 aaKnown RBP27.98■■■□□ 2.07
CSPG5-205ENST00000610462 UNC50Q53HI1 259 aa27.98■■■□□ 2.07
CSPG5-205ENST00000610462 SPATA31D4Q6ZUB0 917 aa27.98■■■□□ 2.07
CSPG5-205ENST00000610462 EFHBQ8N7U6 833 aa27.98■■■□□ 2.07
CSPG5-205ENST00000610462 MEAF6Q9HAF1 191 aa27.98■■■□□ 2.07
CSPG5-205ENST00000610462 TAS2R13Q9NYV9 303 aa27.98■■■□□ 2.07
CSPG5-205ENST00000610462 DNMT3BQ9UBC3 853 aaKnown RBP27.98■■■□□ 2.07
CSPG5-205ENST00000610462 SRP72O76094 671 aaKnown RBP27.98■■■□□ 2.07
CSPG5-205ENST00000610462 CD1EP15812 388 aa27.98■■■□□ 2.07
CSPG5-205ENST00000610462 PPM1AP35813 382 aa27.98■■■□□ 2.07
CSPG5-205ENST00000610462 VHLP40337 213 aa27.98■■■□□ 2.07
CSPG5-205ENST00000610462 HERVK_113P63132 956 aa27.98■■■□□ 2.07
CSPG5-205ENST00000610462 CREMQ03060 361 aa27.98■■■□□ 2.07
CSPG5-205ENST00000610462 CDH18Q13634 790 aa27.98■■■□□ 2.07
CSPG5-205ENST00000610462 CYLC2Q14093 348 aaPredicted RBP27.98■■■□□ 2.07
CSPG5-205ENST00000610462 OR4D1Q15615 310 aa27.98■■■□□ 2.07
CSPG5-205ENST00000610462 TTC30BQ8N4P2 665 aa27.98■■■□□ 2.07
CSPG5-205ENST00000610462 SHKBP1Q8TBC3 707 aa27.98■■■□□ 2.07
CSPG5-205ENST00000610462 WFDC5Q8TCV5 224 aa27.98■■■□□ 2.07
CSPG5-205ENST00000610462 LBHD1Q9BQE6 289 aaPredicted RBP27.98■■■□□ 2.07
CSPG5-205ENST00000610462 ERVK-6Q9BXR3 956 aa27.98■■■□□ 2.07
CSPG5-205ENST00000610462 ZBTB26Q9HCK0 441 aa27.98■■■□□ 2.07
CSPG5-205ENST00000610462 HACD3Q9P035 362 aa27.98■■■□□ 2.07
CSPG5-205ENST00000610462 FKBPLQ9UIM3 349 aa27.98■■■□□ 2.07
CSPG5-205ENST00000610462 VPS9D1Q9Y2B5 631 aa27.98■■■□□ 2.07
CSPG5-205ENST00000610462 FIS1Q9Y3D6 152 aa27.98■■■□□ 2.07
CSPG5-205ENST00000610462 EFCAB14O75071 495 aa27.97■■■□□ 2.07
CSPG5-205ENST00000610462 SKAP2O75563 359 aaPredicted RBP27.97■■■□□ 2.07
CSPG5-205ENST00000610462 SUPT7LO94864 414 aa27.97■■■□□ 2.07
CSPG5-205ENST00000610462 CSF2RAP15509 400 aa27.97■■■□□ 2.07
CSPG5-205ENST00000610462 EPHB1P54762 984 aa27.97■■■□□ 2.07
CSPG5-205ENST00000610462 TBL3Q12788 808 aaKnown RBP27.97■■■□□ 2.07
CSPG5-205ENST00000610462 PPM1LQ5SGD2 360 aa27.97■■■□□ 2.07
CSPG5-205ENST00000610462 DCAF4L2Q8NA75 395 aa27.97■■■□□ 2.07
CSPG5-205ENST00000610462 LSM7Q9UK45 103 aaKnown RBP27.97■■■□□ 2.07
CSPG5-205ENST00000610462 MED16Q9Y2X0 877 aa27.97■■■□□ 2.07
CSPG5-205ENST00000610462 FCF1Q9Y324 198 aaKnown RBP27.97■■■□□ 2.07
CSPG5-205ENST00000610462 COPG1Q9Y678 874 aaKnown RBP27.97■■■□□ 2.07
CSPG5-205ENST00000610462 STX7O15400 261 aaKnown RBP27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms