RNA–Protein interactions for RNA: ENST00000610189.1

GPN1-211, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPN1, Length 1,778 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-211ENST00000610189 CDKN3Q16667 212 aa13.66□□□□□ -0.22
GPN1-211ENST00000610189 FNDC3BQ53EP0 1204 aaKnown RBP13.66□□□□□ -0.22
GPN1-211ENST00000610189 USP45Q70EL2 814 aa13.66□□□□□ -0.22
GPN1-211ENST00000610189 SDCCAG8Q86SQ7 713 aaPredicted RBP13.66□□□□□ -0.22
GPN1-211ENST00000610189 CEP97Q8IW35 865 aa13.66□□□□□ -0.22
GPN1-211ENST00000610189 SFTPA1Q8IWL2 248 aa13.66□□□□□ -0.22
GPN1-211ENST00000610189 ZNF366Q8N895 744 aa13.66□□□□□ -0.22
GPN1-211ENST00000610189 TERB1Q8NA31 727 aa13.66□□□□□ -0.22
GPN1-211ENST00000610189 CCDC63Q8NA47 563 aa13.66□□□□□ -0.22
GPN1-211ENST00000610189 ZNF75CPQ92670 426 aaPredicted RBP13.66□□□□□ -0.22
GPN1-211ENST00000610189 KLHL32Q96NJ5 620 aa13.66□□□□□ -0.22
GPN1-211ENST00000610189 LYSMD1Q96S90 227 aa13.66□□□□□ -0.22
GPN1-211ENST00000610189 OLFM1Q99784 485 aa13.66□□□□□ -0.22
GPN1-211ENST00000610189 MECRQ9BV79 373 aa13.66□□□□□ -0.22
GPN1-211ENST00000610189 ZFYVE1Q9HBF4 777 aa13.66□□□□□ -0.22
GPN1-211ENST00000610189 INTS10Q9NVR2 710 aaKnown RBP13.66□□□□□ -0.22
GPN1-211ENST00000610189 ZNF358Q9NW07 568 aa13.66□□□□□ -0.22
GPN1-211ENST00000610189 TMEM216Q9P0N5 145 aa13.66□□□□□ -0.22
GPN1-211ENST00000610189 TLK1Q9UKI8 766 aa13.66□□□□□ -0.22
GPN1-211ENST00000610189 PPIL1Q9Y3C6 166 aa13.66□□□□□ -0.22
GPN1-211ENST00000610189 PLXNA2O75051 1894 aa13.65□□□□□ -0.22
GPN1-211ENST00000610189 A0A1W2PQ67 120 aa13.65□□□□□ -0.22
GPN1-211ENST00000610189 ECI2O75521 394 aa13.65□□□□□ -0.22
GPN1-211ENST00000610189 CLDN7O95471 211 aa13.65□□□□□ -0.22
GPN1-211ENST00000610189 BGNP21810 368 aa13.65□□□□□ -0.22
GPN1-211ENST00000610189 CRABP2P29373 138 aa13.65□□□□□ -0.22
GPN1-211ENST00000610189 PMLP29590 882 aa13.65□□□□□ -0.22
GPN1-211ENST00000610189 GJA4P35212 333 aa13.65□□□□□ -0.22
GPN1-211ENST00000610189 SLC12A2P55011 1212 aa13.65□□□□□ -0.22
GPN1-211ENST00000610189 ILF2Q12905 390 aaKnown RBP13.65□□□□□ -0.22
GPN1-211ENST00000610189 COL19A1Q14993 1142 aa13.65□□□□□ -0.22
GPN1-211ENST00000610189 ZSCAN26Q16670 478 aa13.65□□□□□ -0.22
GPN1-211ENST00000610189 ZRANB3Q5FWF4 1079 aa13.65□□□□□ -0.22
GPN1-211ENST00000610189 HECTD2Q5U5R9 776 aa13.65□□□□□ -0.22
GPN1-211ENST00000610189 PSAPL1Q6NUJ1 521 aa13.65□□□□□ -0.22
GPN1-211ENST00000610189 FAM47EQ6ZV65 393 aa13.65□□□□□ -0.22
GPN1-211ENST00000610189 TSPAN33Q86UF1 283 aa13.65□□□□□ -0.22
GPN1-211ENST00000610189 SCG3Q8WXD2 468 aaKnown RBP13.65□□□□□ -0.22
GPN1-211ENST00000610189 MCCC1Q96RQ3 725 aaPredicted RBP13.65□□□□□ -0.22
GPN1-211ENST00000610189 C1QTNF1Q9BXJ1 281 aa13.65□□□□□ -0.22
GPN1-211ENST00000610189 IL36AQ9UHA7 158 aa13.65□□□□□ -0.22
GPN1-211ENST00000610189 CORO1CQ9ULV4 474 aaPredicted RBP13.65□□□□□ -0.22
GPN1-211ENST00000610189 CRYL1Q9Y2S2 319 aa13.65□□□□□ -0.22
GPN1-211ENST00000610189 TMEM265A0A087WTH1 108 aa13.64□□□□□ -0.23
GPN1-211ENST00000610189 A8MX80 341 aa13.64□□□□□ -0.23
GPN1-211ENST00000610189 LEFTY1O75610 366 aa13.64□□□□□ -0.23
GPN1-211ENST00000610189 CTSLP07711 333 aa13.64□□□□□ -0.23
GPN1-211ENST00000610189 BPGMP07738 259 aa13.64□□□□□ -0.23
GPN1-211ENST00000610189 NEFHP12036 1026 aa13.64□□□□□ -0.23
GPN1-211ENST00000610189 CDKN1CP49918 316 aaPredicted RBP13.64□□□□□ -0.23
GPN1-211ENST00000610189 XIAPP98170 497 aa13.64□□□□□ -0.23
GPN1-211ENST00000610189 SEMG2Q02383 582 aa13.64□□□□□ -0.23
GPN1-211ENST00000610189 LRIT3Q3SXY7 679 aa13.64□□□□□ -0.23
GPN1-211ENST00000610189 ARSIQ5FYB1 569 aa13.64□□□□□ -0.23
GPN1-211ENST00000610189 FAM45BPQ6NSW5 357 aa13.64□□□□□ -0.23
GPN1-211ENST00000610189 FOXR1Q6PIV2 292 aa13.64□□□□□ -0.23
GPN1-211ENST00000610189 BRAT1Q6PJG6 821 aa13.64□□□□□ -0.23
GPN1-211ENST00000610189 TPRG1Q6ZUI0 275 aa13.64□□□□□ -0.23
GPN1-211ENST00000610189 MTSS1LQ765P7 747 aa13.64□□□□□ -0.23
GPN1-211ENST00000610189 PIANPQ8IYJ0 282 aa13.64□□□□□ -0.23
GPN1-211ENST00000610189 MICALL1Q8N3F8 863 aa13.64□□□□□ -0.23
GPN1-211ENST00000610189 SMRP1Q8NCR6 262 aa13.64□□□□□ -0.23
GPN1-211ENST00000610189 FAM45AQ8TCE6 357 aa13.64□□□□□ -0.23
GPN1-211ENST00000610189 KCTD4Q8WVF5 259 aa13.64□□□□□ -0.23
GPN1-211ENST00000610189 SCRN2Q96FV2 425 aa13.64□□□□□ -0.23
GPN1-211ENST00000610189 TSPAN17Q96FV3 270 aa13.64□□□□□ -0.23
GPN1-211ENST00000610189 TSNARE1Q96NA8 513 aa13.64□□□□□ -0.23
GPN1-211ENST00000610189 RPP25Q9BUL9 199 aaKnown RBP13.64□□□□□ -0.23
GPN1-211ENST00000610189 MANSC1Q9H8J5 431 aa13.64□□□□□ -0.23
GPN1-211ENST00000610189 PLA2G4CQ9UP65 541 aa13.64□□□□□ -0.23
GPN1-211ENST00000610189 LRRK1Q38SD2 2015 aa13.64□□□□□ -0.23
GPN1-211ENST00000610189 COL4A2P08572 1712 aa13.64□□□□□ -0.23
GPN1-211ENST00000610189 A0A087X1B8 175 aa13.63□□□□□ -0.23
GPN1-211ENST00000610189 UBA6A0AVT1 1052 aaPredicted RBP13.63□□□□□ -0.23
GPN1-211ENST00000610189 TSPAN11A1L157 253 aa13.63□□□□□ -0.23
GPN1-211ENST00000610189 BIRC5O15392 142 aa13.63□□□□□ -0.23
GPN1-211ENST00000610189 IGFBP4P22692 258 aa13.63□□□□□ -0.23
GPN1-211ENST00000610189 CDKN2DP55273 166 aa13.63□□□□□ -0.23
GPN1-211ENST00000610189 CCDC153Q494R4 210 aa13.63□□□□□ -0.23
GPN1-211ENST00000610189 LRRC73Q5JTD7 316 aa13.63□□□□□ -0.23
GPN1-211ENST00000610189 LRRC66Q68CR7 880 aa13.63□□□□□ -0.23
GPN1-211ENST00000610189 ZNF549Q6P9A3 640 aa13.63□□□□□ -0.23
GPN1-211ENST00000610189 CRTC1Q6UUV9 634 aa13.63□□□□□ -0.23
GPN1-211ENST00000610189 FAM151BQ6UXP7 276 aa13.63□□□□□ -0.23
GPN1-211ENST00000610189 LCA5Q86VQ0 697 aa13.63□□□□□ -0.23
GPN1-211ENST00000610189 CENPLQ8N0S6 344 aaPredicted RBP13.63□□□□□ -0.23
GPN1-211ENST00000610189 KDM1BQ8NB78 822 aa13.63□□□□□ -0.23
GPN1-211ENST00000610189 LPGAT1Q92604 370 aa13.63□□□□□ -0.23
GPN1-211ENST00000610189 CHFRQ96EP1 664 aa13.63□□□□□ -0.23
GPN1-211ENST00000610189 NECTIN4Q96NY8 510 aa13.63□□□□□ -0.23
GPN1-211ENST00000610189 TCF12Q99081 682 aa13.63□□□□□ -0.23
GPN1-211ENST00000610189 ELAC2Q9BQ52 826 aaKnown RBP13.63□□□□□ -0.23
GPN1-211ENST00000610189 C19orf43Q9BQ61 176 aa13.63□□□□□ -0.23
GPN1-211ENST00000610189 TRMT61BQ9BVS5 477 aaKnown RBP13.63□□□□□ -0.23
GPN1-211ENST00000610189 OSBPL1AQ9BXW6 950 aa13.63□□□□□ -0.23
GPN1-211ENST00000610189 FAM96AQ9H5X1 160 aa13.63□□□□□ -0.23
GPN1-211ENST00000610189 BRD9Q9H8M2 597 aa13.63□□□□□ -0.23
GPN1-211ENST00000610189 SLCO1B3Q9NPD5 702 aa13.63□□□□□ -0.23
GPN1-211ENST00000610189 SIRPGQ9P1W8 387 aa13.63□□□□□ -0.23
GPN1-211ENST00000610189 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms