RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 HERVK_113P63132 956 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 SLC7A9P82251 487 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 CDH18Q13634 790 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 RCN1Q15293 331 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 ACCSLQ4AC99 568 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 C1orf146Q5VVC0 180 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 PGM2L1Q6PCE3 622 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 TMEM207Q6UWW9 146 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 C16orf89Q6UX73 402 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 CCDC149Q6ZUS6 474 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 NKAPQ8N5F7 415 aaKnown RBP11.94□□□□□ -0.5
USP6NL-206ENST00000609853 LPCAT1Q8NF37 534 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 MDGA1Q8NFP4 955 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 JADE3Q92613 823 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 LENG8Q96PV6 779 aaPredicted RBP11.94□□□□□ -0.5
USP6NL-206ENST00000609853 ERVK-6Q9BXR3 956 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 DERL2Q9GZP9 239 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 ALG9Q9H6U8 611 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 WDR55Q9H6Y2 383 aaPredicted RBP11.94□□□□□ -0.5
USP6NL-206ENST00000609853 MEAF6Q9HAF1 191 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 SMPD4Q9NXE4 827 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 GTSE1Q9NYZ3 720 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 LHX3Q9UBR4 397 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 PRPF19Q9UMS4 504 aaKnown RBP11.94□□□□□ -0.5
USP6NL-206ENST00000609853 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.93□□□□□ -0.5
USP6NL-206ENST00000609853 GOLGA8CPA6NN73 597 aa11.93□□□□□ -0.5
USP6NL-206ENST00000609853 SYCE1LA8MT33 242 aa11.93□□□□□ -0.5
USP6NL-206ENST00000609853 STX7O15400 261 aaKnown RBP11.93□□□□□ -0.5
USP6NL-206ENST00000609853 TEX28O15482 410 aa11.93□□□□□ -0.5
USP6NL-206ENST00000609853 CD160O95971 181 aa11.93□□□□□ -0.5
USP6NL-206ENST00000609853 PIRTP0C851 137 aa11.93□□□□□ -0.5
USP6NL-206ENST00000609853 VHLP40337 213 aa11.93□□□□□ -0.5
USP6NL-206ENST00000609853 RHOAP61586 193 aa11.93□□□□□ -0.5
USP6NL-206ENST00000609853 AP2B1P63010 937 aa11.93□□□□□ -0.5
USP6NL-206ENST00000609853 IRX1P78414 480 aaPredicted RBP11.93□□□□□ -0.5
USP6NL-206ENST00000609853 SLC25A3Q00325 362 aa11.93□□□□□ -0.5
USP6NL-206ENST00000609853 TIAL1Q01085 375 aaKnown RBP eCLIP11.93□□□□□ -0.5
USP6NL-206ENST00000609853 SULT2A1Q06520 285 aa11.93□□□□□ -0.5
USP6NL-206ENST00000609853 RAD51Q06609 339 aa11.93□□□□□ -0.5
USP6NL-206ENST00000609853 CYLC2Q14093 348 aaPredicted RBP11.93□□□□□ -0.5
USP6NL-206ENST00000609853 SEMA3AQ14563 771 aa11.93□□□□□ -0.5
USP6NL-206ENST00000609853 ZNF678Q5SXM1 525 aa11.93□□□□□ -0.5
USP6NL-206ENST00000609853 RIPOR1Q6ZS17 1223 aa11.93□□□□□ -0.5
USP6NL-206ENST00000609853 HTR3DQ70Z44 454 aa11.93□□□□□ -0.5
USP6NL-206ENST00000609853 CUZD1Q86UP6 607 aa11.93□□□□□ -0.5
USP6NL-206ENST00000609853 STK40Q8N2I9 435 aa11.93□□□□□ -0.5
USP6NL-206ENST00000609853 POU5F2Q8N7G0 328 aa11.93□□□□□ -0.5
USP6NL-206ENST00000609853 KYQ8NBH2 561 aa11.93□□□□□ -0.5
USP6NL-206ENST00000609853 STAG3L4Q8TBR4 150 aa11.93□□□□□ -0.5
USP6NL-206ENST00000609853 WBP2Q969T9 261 aa11.93□□□□□ -0.5
USP6NL-206ENST00000609853 KIAA1191Q96A73 305 aa11.93□□□□□ -0.5
USP6NL-206ENST00000609853 EXOC2Q96KP1 924 aa11.93□□□□□ -0.5
USP6NL-206ENST00000609853 SERPINI1Q99574 410 aa11.93□□□□□ -0.5
USP6NL-206ENST00000609853 MAGEE1Q9HCI5 957 aa11.93□□□□□ -0.5
USP6NL-206ENST00000609853 ZBTB26Q9HCK0 441 aa11.93□□□□□ -0.5
USP6NL-206ENST00000609853 ACTL7AQ9Y615 435 aa11.93□□□□□ -0.5
USP6NL-206ENST00000609853 CPQQ9Y646 472 aa11.93□□□□□ -0.5
USP6NL-206ENST00000609853 NEMP2A6NFY4 417 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 H0Y3Z8 333 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 SDHDO14521 159 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 NEMP1O14524 444 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 KIAA0355O15063 1070 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 BUD23O43709 281 aaKnown RBP11.92□□□□□ -0.5
USP6NL-206ENST00000609853 FZD6O60353 706 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 KERAO60938 352 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 SRP72O76094 671 aaKnown RBP11.92□□□□□ -0.5
USP6NL-206ENST00000609853 RHOBTB1O94844 696 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 SLC4A1P02730 911 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 PDHA1P08559 390 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 FGF4P08620 206 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 HSPA1AP0DMV8 641 aaKnown RBP11.92□□□□□ -0.5
USP6NL-206ENST00000609853 HSPA1BP0DMV9 641 aaKnown RBP11.92□□□□□ -0.5
USP6NL-206ENST00000609853 CTSAP10619 480 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 ITGAXP20702 1163 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 KCNA5P22460 613 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 CDC25CP30307 473 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 CCR10P46092 362 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 DEFB103AP81534 67 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 CUL3Q13618 768 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 PTPRCAPQ14761 206 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 MAPRE2Q15555 327 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 PDCD2Q16342 344 aaPredicted RBP11.92□□□□□ -0.5
USP6NL-206ENST00000609853 MPPE1Q53F39 396 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 NXNQ6DKJ4 435 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 TLDC1Q6P9B6 456 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 CHSY3Q70JA7 882 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 ADGRG6Q86SQ4 1221 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 MYLK4Q86YV6 388 aaPredicted RBP11.92□□□□□ -0.5
USP6NL-206ENST00000609853 TTC30BQ8N4P2 665 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 TMEM199Q8N511 208 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 ARL14EPQ8N8R7 260 aaPredicted RBP11.92□□□□□ -0.5
USP6NL-206ENST00000609853 ADAMTS19Q8TE59 1207 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 ALG14Q96F25 216 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 NSMCE3Q96MG7 304 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 PANX3Q96QZ0 392 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 CYP2S1Q96SQ9 504 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 YME1L1Q96TA2 773 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 UNKQ9C0B0 810 aaKnown RBP11.92□□□□□ -0.5
USP6NL-206ENST00000609853 ZBP1Q9H171 429 aa11.92□□□□□ -0.5
USP6NL-206ENST00000609853 GSTO2Q9H4Y5 243 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms