RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 ADGRF2Q8IZF7 708 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 AADATQ8N5Z0 425 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 SMRP1Q8NCR6 262 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 OR14L1PQ8NHC6 308 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 OIT3Q8WWZ8 545 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 NSUN4Q96CB9 384 aaKnown RBP4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 FAM120BQ96EK7 910 aaKnown RBP4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 RRNAD1Q96FB5 475 aaKnown RBP4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 TXNDC15Q96J42 360 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 LRFN5Q96NI6 719 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 CCDC68Q9H2F9 335 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 EBF3Q9H4W6 596 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 PDZD7Q9H5P4 517 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 ESRP2Q9H6T0 727 aaKnown RBP4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 HINT3Q9NQE9 182 aaKnown RBP4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 CDC14AQ9UNH5 594 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 SESN1Q9Y6P5 492 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 AGAP14A8MT82 685 aa4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 HSPA12AO43301 675 aa4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 ZIC3O60481 467 aa4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 TSPAN9O75954 239 aa4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 OR2C1O95371 312 aa4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 CLTBP09497 229 aa4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 G6PDP11413 515 aa4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 TMEM11P17152 192 aa4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 HNRNPH1P31943 449 aaKnown RBP4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 AMTP48728 403 aa4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 COMPP49747 757 aaPredicted RBP4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 METAP2P50579 478 aaKnown RBP eCLIP4.35□□□□□ -1.711e-11■■■□□ 15
SMCHD1-213ENST00000609587 CLCN3P51790 818 aa4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 GALCP54803 685 aa4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 NLRP5P59047 1200 aa4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 ABATP80404 500 aa4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 CHAF1BQ13112 559 aa4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 NAB2Q15742 525 aa4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 DUSP28Q4G0W2 176 aa4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 METTL2BQ6P1Q9 378 aaKnown RBP4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 DLK2Q6UY11 383 aa4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 PQLC2Q6ZP29 291 aa4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 BRINP3Q76B58 766 aa4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 SZRD1Q7Z422 152 aa4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 ZC3HC1Q86WB0 502 aaKnown RBP4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 SPATA6LQ8N4H0 392 aa4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 PRR26Q8N8Z3 221 aa4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 OR14A16Q8NHC5 309 aa4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 IGSF8Q969P0 613 aa4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 CALML4Q96GE6 196 aa4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 PGAM5Q96HS1 289 aa4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 METTL2AQ96IZ6 378 aaKnown RBP4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 RSRC1Q96IZ7 334 aaKnown RBP4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 MMTAG2Q9BU76 263 aaKnown RBP4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 SLC45A1Q9Y2W3 748 aa4.35□□□□□ -1.71
SMCHD1-213ENST00000609587 hCG_1807616A0A1W2PRN6 198 aa4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 VCYO14598 125 aa4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 FTCDO95954 541 aa4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 CH25HO95992 272 aa4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 RB1P06400 928 aa4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 DDX5P17844 614 aaKnown RBP4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 MAOAP21397 527 aa4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 C21orf33P30042 268 aaPredicted RBP4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 ARRB2P32121 409 aa4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 CCKARP32238 428 aa4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 EIF2S3P41091 472 aaKnown RBP4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 MXI1P50539 228 aa4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 RAD23BP54727 409 aa4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 ZBED6P86452 979 aa4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 TFAP4Q01664 338 aa4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 DSC1Q08554 894 aa4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 AIMP2Q13155 320 aaKnown RBP4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 ACVR2BQ13705 512 aa4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 ADIPOQQ15848 244 aa4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 EIF2S3LQ2VIR3 472 aaKnown RBP4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 CDONQ4KMG0 1287 aa4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 PPP6R3Q5H9R7 873 aaPredicted RBP4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 GGNBP1Q5YKI7 109 aa4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 SIGIRRQ6IA17 410 aa4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 JADE1Q6IE81 842 aa4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 ZNF549Q6P9A3 640 aa4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 B3GNT6Q6ZMB0 384 aa4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 SEPT14Q6ZU15 432 aa4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 DPPA4Q7L190 304 aa4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 DSELQ8IZU8 1212 aa4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 C17orf53Q8N3J3 647 aaPredicted RBP4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 SRBD1Q8N5C6 995 aaKnown RBP4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 C1orf131Q8NDD1 294 aaKnown RBP4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 PPP1R13BQ96KQ4 1090 aa4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 NUDT16L1Q9BRJ7 211 aaKnown RBP4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 PCGF1Q9BSM1 259 aa4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 MAK16Q9BXY0 300 aaKnown RBP4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 MRPL44Q9H9J2 332 aaKnown RBP4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 CNGB3Q9NQW8 809 aa4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 MYO6Q9UM54 1294 aa4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 R3HDM2Q9Y2K5 976 aaKnown RBP4.34□□□□□ -1.71
SMCHD1-213ENST00000609587 IGKV2D-30A0A075B6S6 120 aa4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 C1orf226A1L170 272 aa4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 AHCYL1O43865 530 aa4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 HS6ST1O60243 411 aa4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 JRKO75564 520 aa4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 SERPINI2O75830 405 aa4.33□□□□□ -1.72
SMCHD1-213ENST00000609587 HOXC6P09630 235 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms