RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 ZNF250P15622 560 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 ATF6P18850 670 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 ATP5OP48047 213 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 RPL14P50914 215 aaKnown RBP12.57□□□□□ -0.4
CTCFL-218ENST00000608440 NDST1P52848 882 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 TOP3AQ13472 1001 aaPredicted RBP12.57□□□□□ -0.4
CTCFL-218ENST00000608440 AGKQ53H12 422 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 STXBP5Q5T5C0 1151 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 TIFABQ6ZNK6 161 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 FAM35AQ86V20 835 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 IFNL1Q8IU54 200 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 ADGRF4Q8IZF3 695 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 LILRB2Q8N423 598 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 SLAIN1Q8ND83 568 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 TRPM4Q8TD43 1214 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 ST8SIA2Q92186 375 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 CPB2Q96IY4 423 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 PHOX2BQ99453 314 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 GDF15Q99988 308 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 DPEP3Q9H4B8 488 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 SERHL2Q9H4I8 314 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 TRMT13Q9NUP7 481 aaKnown RBP12.57□□□□□ -0.4
CTCFL-218ENST00000608440 C14orf119Q9NWQ9 140 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.57□□□□□ -0.4
CTCFL-218ENST00000608440 FBXO40Q9UH90 709 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 SAGE2PA6NJ88 616 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 ZNF99A8MXY4 864 aaPredicted RBP12.57□□□□□ -0.4
CTCFL-218ENST00000608440 AKR7A2O43488 359 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 CYP2A6P11509 494 aaPredicted RBP12.57□□□□□ -0.4
CTCFL-218ENST00000608440 POU3F3P20264 500 aaPredicted RBP12.57□□□□□ -0.4
CTCFL-218ENST00000608440 DDCP20711 480 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 NOMO3P69849 1222 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 ROR1Q01973 937 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 SLAMF1Q13291 335 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 CA9Q16790 459 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 BCL7AQ4VC05 210 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 ARL13AQ5H913 290 aaPredicted RBP12.57□□□□□ -0.4
CTCFL-218ENST00000608440 SAMD4BQ5PRF9 694 aaKnown RBP12.57□□□□□ -0.4
CTCFL-218ENST00000608440 LINC00299Q6ZSB3 139 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 WDR49Q8IV35 697 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 PPP1R13LQ8WUF5 828 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 AFG1LQ8WV93 481 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 TMEM80Q96HE8 168 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 USB1Q9BQ65 265 aaKnown RBP12.57□□□□□ -0.4
CTCFL-218ENST00000608440 TRIM8Q9BZR9 551 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 RSAD1Q9HA92 442 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 SLC9A2Q9UBY0 812 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 PDE10AQ9Y233 779 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 CCDC78A2IDD5 438 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 TMEM191CA6NGB0 347 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 C3orf70A6NLC5 250 aaPredicted RBP12.56□□□□□ -0.4
CTCFL-218ENST00000608440 hCG_1984214I3L0E3 225 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 SERPINI2O75830 405 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 CHRNA1P02708 482 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 PCNAP12004 261 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 IL7P13232 177 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 LRPAP1P30533 357 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 EPS8Q12929 822 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 INPP5AQ14642 412 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 TXNDC11Q6PKC3 985 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 TRMT1LQ7Z2T5 733 aaKnown RBP12.56□□□□□ -0.4
CTCFL-218ENST00000608440 TBC1D21Q8IYX1 336 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 ANKRD53Q8N9V6 530 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 SMG8Q8ND04 991 aaKnown RBP12.56□□□□□ -0.4
CTCFL-218ENST00000608440 FBXL13Q8NEE6 735 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 OR4M1Q8NGD0 313 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 LRCH3Q96II8 777 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 GON7Q9BXV9 100 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 VPS33BQ9H267 617 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 TNKS2Q9H2K2 1166 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 DHX35Q9H5Z1 703 aaKnown RBP12.56□□□□□ -0.4
CTCFL-218ENST00000608440 LIN7BQ9HAP6 207 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 TLR9Q9NR96 1032 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 TMEM39AQ9NV64 488 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 FBXO28Q9NVF7 368 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 POLR3BQ9NW08 1133 aaPredicted RBP12.56□□□□□ -0.4
CTCFL-218ENST00000608440 PAK1IP1Q9NWT1 392 aaPredicted RBP12.56□□□□□ -0.4
CTCFL-218ENST00000608440 MTMR4Q9NYA4 1195 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 MAGED1Q9Y5V3 778 aaPredicted RBP12.56□□□□□ -0.4
CTCFL-218ENST00000608440 MYH9P35579 1960 aaKnown RBP12.56□□□□□ -0.4
CTCFL-218ENST00000608440 PNMA6FA0A0J9YX94 578 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 AGAP5A6NIR3 686 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 OR5K4A6NMS3 321 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 NFIBO00712 420 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 MRASO14807 208 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 SRP72O76094 671 aaKnown RBP12.56□□□□□ -0.4
CTCFL-218ENST00000608440 CYP3A4P08684 503 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 GGT5P36269 586 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 MAP2K4P45985 399 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 PRELPP51888 382 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 CYP51A1Q16850 503 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 THAP5Q7Z6K1 395 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 P2RY8Q86VZ1 359 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 PARP16Q8N5Y8 322 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 REXO5Q96IC2 774 aaKnown RBP12.56□□□□□ -0.4
CTCFL-218ENST00000608440 RIPOR3Q96MK2 946 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 TSNARE1Q96NA8 513 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 NODALQ96S42 347 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 TEX13BQ9BXU2 312 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 PRDM8Q9NQV8 689 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms