RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 CIDEAO60543 219 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 LILRB5O75023 590 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 ABCB7O75027 752 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 TRIM3O75382 744 aaPredicted RBP8.88□□□□□ -0.99
COMMD3-215ENST00000602574 CELF2O95319 508 aaKnown RBP8.88□□□□□ -0.99
COMMD3-215ENST00000602574 TNNC2P02585 160 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 SERPING1P05155 500 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 ENO1P06733 434 aaKnown RBP8.88□□□□□ -0.99
COMMD3-215ENST00000602574 BMP2P12643 396 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 ABCB4P21439 1286 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 TNFAIP3P21580 790 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 HSD3B2P26439 372 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 SSTR3P32745 418 aaPredicted RBP8.88□□□□□ -0.99
COMMD3-215ENST00000602574 ARL4CP56559 192 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 ERVFC1P60507 584 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 RPP30P78346 268 aaKnown RBP8.88□□□□□ -0.99
COMMD3-215ENST00000602574 CHRNDQ07001 517 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 GRIK2Q13002 908 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 CUL2Q13617 745 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 PUM1Q14671 1186 aaKnown RBP eCLIP8.88□□□□□ -0.99
COMMD3-215ENST00000602574 SMAD2Q15796 467 aaKnown RBP8.88□□□□□ -0.99
COMMD3-215ENST00000602574 SLC18A3Q16572 532 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 PARP15Q460N3 678 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 HSD17B12Q53GQ0 312 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 MARCH8Q5T0T0 291 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 CLEC2AQ6UVW9 174 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 TBC1D10CQ8IV04 446 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 SCML4Q8N228 414 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 PRR18Q8N4B5 295 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 SVOPQ8N4V2 548 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 PACRGLQ8N7B6 248 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 IL17RCQ8NAC3 791 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 TXNDC5Q8NBS9 432 aaKnown RBP8.88□□□□□ -0.99
COMMD3-215ENST00000602574 OR10T2Q8NGX3 314 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 OR5M11Q96RB7 305 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 TUBGCP2Q9BSJ2 902 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 BDH2Q9BUT1 245 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 ZNF700Q9H0M5 742 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 POLR1BQ9H9Y6 1135 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 BIN3Q9NQY0 253 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 COQ3Q9NZJ6 369 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 VTI1BQ9UEU0 232 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 VPS28Q9UK41 221 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 FBXO5Q9UKT4 447 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 TRHDEQ9UKU6 1024 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 FKBP7Q9Y680 259 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 TNRQ92752 1358 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 TAF1P21675 1872 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 MFSD2BA6NFX1 497 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 TLL1O43897 1013 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 TYROBPO43914 113 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 MED24O75448 989 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 SLC22A5O76082 557 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 POLBP06746 335 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 PLA2G4BP0C869 781 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 RNF224P0DH78 156 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 CYP2C8P10632 490 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 C7P10643 843 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 EDN3P14138 238 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 DARSP14868 501 aaKnown RBP8.87□□□□□ -0.99
COMMD3-215ENST00000602574 TNNI3P19429 210 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 HOXC9P31274 260 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 GPC1P35052 558 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 GRIA1P42261 906 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 RPL21P46778 160 aaKnown RBP8.87□□□□□ -0.99
COMMD3-215ENST00000602574 AKR1D1P51857 326 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 DEFA1P59665 94 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 DEFA3P59666 94 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 RNASE9P60153 205 aaKnown RBP8.87□□□□□ -0.99
COMMD3-215ENST00000602574 CHRNA2Q15822 529 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 DUSP6Q16828 381 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 LBHQ53QV2 105 aaPredicted RBP8.87□□□□□ -0.99
COMMD3-215ENST00000602574 RTL4Q6ZR62 310 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 GALNT10Q86SR1 603 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 NT5DC3Q86UY8 548 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 ZNF227Q86WZ6 799 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 ATG16L2Q8NAA4 619 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 TAS1R2Q8TE23 839 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 BAP1Q92560 729 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 PRR11Q96HE9 360 aaPredicted RBP8.87□□□□□ -0.99
COMMD3-215ENST00000602574 SLC9A7Q96T83 725 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 NPAS1Q99742 590 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 TSSK1BQ9BXA7 367 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 PINK1Q9BXM7 581 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 UNC93B1Q9H1C4 597 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 ABCC13Q9NSE7 274 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 PAK1IP1Q9NWT1 392 aaPredicted RBP8.87□□□□□ -0.99
COMMD3-215ENST00000602574 CD274Q9NZQ7 290 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 UXTQ9UBK9 157 aaPredicted RBP8.87□□□□□ -0.99
COMMD3-215ENST00000602574 PRPF19Q9UMS4 504 aaKnown RBP8.87□□□□□ -0.99
COMMD3-215ENST00000602574 AP4E1Q9UPM8 1137 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 PLCL2Q9UPR0 1127 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 BOLA1Q9Y3E2 137 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 NDUFS8O00217 210 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 SLC31A2O15432 143 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 RGS5O15539 181 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 HRO43593 1189 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 UGT2B11O75310 529 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 PDE9AO76083 593 aa8.87□□□□□ -0.99
COMMD3-215ENST00000602574 TSPAN12O95859 305 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms