RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 EID2BQ96D98 161 aa17.98■□□□□ 0.47
VRK3-225ENST00000601912 ACOX2Q99424 681 aa17.98■□□□□ 0.47
VRK3-225ENST00000601912 GPR22Q99680 433 aa17.98■□□□□ 0.47
VRK3-225ENST00000601912 PRSS16Q9NQE7 514 aa17.98■□□□□ 0.47
VRK3-225ENST00000601912 FBXO6Q9NRD1 293 aaPredicted RBP17.98■□□□□ 0.47
VRK3-225ENST00000601912 HEBP1Q9NRV9 189 aa17.98■□□□□ 0.47
VRK3-225ENST00000601912 INTS9Q9NV88 658 aaKnown RBP17.98■□□□□ 0.47
VRK3-225ENST00000601912 B4GALT6Q9UBX8 382 aa17.98■□□□□ 0.47
VRK3-225ENST00000601912 APPL1Q9UKG1 709 aa17.98■□□□□ 0.47
VRK3-225ENST00000601912 HCN2Q9UL51 889 aa17.98■□□□□ 0.47
VRK3-225ENST00000601912 MTO1Q9Y2Z2 717 aaKnown RBP17.98■□□□□ 0.47
VRK3-225ENST00000601912 MUC22E2RYF6 1773 aaPredicted RBP17.98■□□□□ 0.47
VRK3-225ENST00000601912 C1QTNF3-AMACRE9PGA6 284 aa17.97■□□□□ 0.47
VRK3-225ENST00000601912 K7EQS6 105 aa17.97■□□□□ 0.47
VRK3-225ENST00000601912 COPEO14579 308 aa17.97■□□□□ 0.47
VRK3-225ENST00000601912 TPP1O14773 563 aa17.97■□□□□ 0.47
VRK3-225ENST00000601912 TYROBPO43914 113 aa17.97■□□□□ 0.47
VRK3-225ENST00000601912 HAUS5O94927 633 aa17.97■□□□□ 0.47
VRK3-225ENST00000601912 F7P08709 466 aaPredicted RBP17.97■□□□□ 0.47
VRK3-225ENST00000601912 GLULP15104 373 aa17.97■□□□□ 0.47
VRK3-225ENST00000601912 ZNF30P17039 623 aa17.97■□□□□ 0.47
VRK3-225ENST00000601912 ITGB7P26010 798 aa17.97■□□□□ 0.47
VRK3-225ENST00000601912 PTPN5P54829 565 aa17.97■□□□□ 0.47
VRK3-225ENST00000601912 GRSF1Q12849 480 aaKnown RBP eCLIP17.97■□□□□ 0.47
VRK3-225ENST00000601912 ENPP2Q13822 863 aa17.97■□□□□ 0.47
VRK3-225ENST00000601912 SEPT7Q16181 437 aaKnown RBP17.97■□□□□ 0.47
VRK3-225ENST00000601912 ZDHHC20Q5W0Z9 365 aa17.97■□□□□ 0.47
VRK3-225ENST00000601912 ERAP2Q6P179 960 aa17.97■□□□□ 0.47
VRK3-225ENST00000601912 TXNDC11Q6PKC3 985 aa17.97■□□□□ 0.47
VRK3-225ENST00000601912 SH2D5Q6ZV89 423 aa17.97■□□□□ 0.47
VRK3-225ENST00000601912 TSPAN33Q86UF1 283 aa17.97■□□□□ 0.47
VRK3-225ENST00000601912 CBARPQ8N350 705 aaPredicted RBP17.97■□□□□ 0.47
VRK3-225ENST00000601912 ANKRD42Q8N9B4 389 aa17.97■□□□□ 0.47
VRK3-225ENST00000601912 PBXIP1Q96AQ6 731 aa17.97■□□□□ 0.47
VRK3-225ENST00000601912 APOPT1Q96IL0 206 aa17.97■□□□□ 0.47
VRK3-225ENST00000601912 FAM129BQ96TA1 746 aa17.97■□□□□ 0.47
VRK3-225ENST00000601912 TCF12Q99081 682 aa17.97■□□□□ 0.47
VRK3-225ENST00000601912 IQCGQ9H095 443 aaKnown RBP17.97■□□□□ 0.47
VRK3-225ENST00000601912 DYRK4Q9NR20 520 aa17.97■□□□□ 0.47
VRK3-225ENST00000601912 MARCH4Q9P2E8 410 aaPredicted RBP17.97■□□□□ 0.47
VRK3-225ENST00000601912 VPS9D1Q9Y2B5 631 aa17.97■□□□□ 0.47
VRK3-225ENST00000601912 FNDC3AQ9Y2H6 1198 aaKnown RBP17.97■□□□□ 0.47
VRK3-225ENST00000601912 SLC30A1Q9Y6M5 507 aa17.97■□□□□ 0.47
VRK3-225ENST00000601912 ZWINTO95229 277 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 S1PR4O95977 384 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 IL1BP01584 269 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 ALDOAP04075 364 aaKnown RBP17.96■□□□□ 0.47
VRK3-225ENST00000601912 ASGR2P07307 311 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 DRD1P21728 446 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 VIPR1P32241 457 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 TIE1P35590 1138 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 KIR2DL1P43626 348 aaPredicted RBP17.96■□□□□ 0.47
VRK3-225ENST00000601912 ABCG1P45844 678 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 CCT5P48643 541 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 CLCN5P51795 746 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 SEC13P55735 322 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 GUCY1A3Q02108 690 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 PON2Q15165 354 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 POM121L1PQ3SYA9 428 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 ZRANB3Q5FWF4 1079 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 AARS2Q5JTZ9 985 aaKnown RBP17.96■□□□□ 0.47
VRK3-225ENST00000601912 FAM46CQ5VWP2 391 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 SDE2Q6IQ49 451 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.96■□□□□ 0.47
VRK3-225ENST00000601912 ISL2Q96A47 359 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 MSANTD3Q96H12 275 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 CABS1Q96KC9 395 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 PCDH12Q9NPG4 1184 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 ZDHHC4Q9NPG8 344 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 INTS10Q9NVR2 710 aaKnown RBP17.96■□□□□ 0.47
VRK3-225ENST00000601912 SARDHQ9UL12 918 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 SLC39A10Q9ULF5 831 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 TM9SF1O15321 606 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 SYNCRIPO60506 623 aaKnown RBP17.96■□□□□ 0.47
VRK3-225ENST00000601912 MPOP05164 745 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 FOXN2P32314 431 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 RPA3P35244 121 aaPredicted RBP17.96■□□□□ 0.47
VRK3-225ENST00000601912 CCNFP41002 786 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 STC1P52823 247 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 SEMG2Q02383 582 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 PTSQ03393 145 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 CACNG1Q06432 222 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 PEX6Q13608 980 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 USP10Q14694 798 aaKnown RBP17.96■□□□□ 0.47
VRK3-225ENST00000601912 TYSND1Q2T9J0 566 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 TMEM196Q5HYL7 178 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 LRRC73Q5JTD7 316 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 CNSTQ6PJW8 725 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 LDB1Q86U70 411 aaPredicted RBP17.96■□□□□ 0.47
VRK3-225ENST00000601912 MGARPQ8TDB4 240 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 CENPTQ96BT3 561 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 SLC13A1Q9BZW2 595 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 SNX15Q9NRS6 342 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 PCMTD2Q9NV79 361 aa17.96■□□□□ 0.47
VRK3-225ENST00000601912 FAM95CA0A1B0GW59 222 aa17.95■□□□□ 0.46
VRK3-225ENST00000601912 RNASEH1O60930 286 aaKnown RBP17.95■□□□□ 0.46
VRK3-225ENST00000601912 NDUFS3O75489 264 aa17.95■□□□□ 0.46
VRK3-225ENST00000601912 LHCGRP22888 699 aa17.95■□□□□ 0.46
VRK3-225ENST00000601912 PPARGP37231 505 aaPredicted RBP17.95■□□□□ 0.46
VRK3-225ENST00000601912 SPAM1P38567 509 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms