RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 ADAMTSL4Q6UY14 1074 aa8.78□□□□□ -1
SSBP4-208ENST00000600628 USP45Q70EL2 814 aa8.78□□□□□ -1
SSBP4-208ENST00000600628 B4GALNT4Q76KP1 1039 aa8.78□□□□□ -1
SSBP4-208ENST00000600628 TMPRSS7Q7RTY8 843 aa8.78□□□□□ -1
SSBP4-208ENST00000600628 PEX26Q7Z412 305 aa8.78□□□□□ -1
SSBP4-208ENST00000600628 TMC3Q7Z5M5 1100 aa8.78□□□□□ -1
SSBP4-208ENST00000600628 NRSN1Q8IZ57 195 aa8.78□□□□□ -1
SSBP4-208ENST00000600628 EID2Q8N6I1 236 aa8.78□□□□□ -1
SSBP4-208ENST00000600628 SPATA22Q8NHS9 363 aa8.78□□□□□ -1
SSBP4-208ENST00000600628 SLC35B2Q8TB61 432 aa8.78□□□□□ -1
SSBP4-208ENST00000600628 DTX3LQ8TDB6 740 aa8.78□□□□□ -1
SSBP4-208ENST00000600628 HTR3CQ8WXA8 447 aa8.78□□□□□ -1
SSBP4-208ENST00000600628 RTP4Q96DX8 246 aa8.78□□□□□ -1
SSBP4-208ENST00000600628 OXNAD1Q96HP4 312 aaPredicted RBP8.78□□□□□ -1
SSBP4-208ENST00000600628 MRGPRX2Q96LB1 330 aa8.78□□□□□ -1
SSBP4-208ENST00000600628 AGAP3Q96P47 875 aa8.78□□□□□ -1
SSBP4-208ENST00000600628 FCRL5Q96RD9 977 aa8.78□□□□□ -1
SSBP4-208ENST00000600628 RBM15Q96T37 977 aaKnown RBP eCLIP8.78□□□□□ -1
SSBP4-208ENST00000600628 LRRC61Q9BV99 259 aa8.78□□□□□ -1
SSBP4-208ENST00000600628 LGR4Q9BXB1 951 aa8.78□□□□□ -1
SSBP4-208ENST00000600628 HEMGNQ9BXL5 484 aa8.78□□□□□ -1
SSBP4-208ENST00000600628 CEP41Q9BYV8 373 aa8.78□□□□□ -1
SSBP4-208ENST00000600628 TSGA10Q9BZW7 698 aa8.78□□□□□ -1
SSBP4-208ENST00000600628 ABCG8Q9H221 673 aa8.78□□□□□ -1
SSBP4-208ENST00000600628 GRPEL1Q9HAV7 217 aa8.78□□□□□ -1
SSBP4-208ENST00000600628 MAGEE1Q9HCI5 957 aa8.78□□□□□ -1
SSBP4-208ENST00000600628 FGF22Q9HCT0 170 aa8.78□□□□□ -1
SSBP4-208ENST00000600628 HAUS2Q9NVX0 235 aa8.78□□□□□ -1
SSBP4-208ENST00000600628 FTSJ1Q9UET6 329 aa8.78□□□□□ -1
SSBP4-208ENST00000600628 KLK13Q9UKR3 277 aa8.78□□□□□ -1
SSBP4-208ENST00000600628 TRHDEQ9UKU6 1024 aa8.78□□□□□ -1
SSBP4-208ENST00000600628 AMFRQ9UKV5 643 aa8.78□□□□□ -1
SSBP4-208ENST00000600628 DNPEPQ9ULA0 475 aa8.78□□□□□ -1
SSBP4-208ENST00000600628 CNOT6Q9ULM6 557 aaKnown RBP8.78□□□□□ -1
SSBP4-208ENST00000600628 OR1A2Q9Y585 309 aa8.78□□□□□ -1
SSBP4-208ENST00000600628 ST14Q9Y5Y6 855 aa8.78□□□□□ -1
SSBP4-208ENST00000600628 CACNA1BQ00975 2339 aa8.77□□□□□ -1
SSBP4-208ENST00000600628 UNC13CQ8NB66 2214 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 TCRBV7S2A1N4TA0A589 114 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 RGSL1A5PLK6 1076 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 GOLGA8CPA6NN73 597 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 C1QTNF9BB2RNN3 333 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 ENC1O14682 589 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 AQP9O43315 295 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 SIGLEC6O43699 453 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 KRT86O43790 486 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 SDC3O75056 442 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 CLDN7O95471 211 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 LDOC1O95751 146 aaPredicted RBP8.77□□□□□ -1.01
SSBP4-208ENST00000600628 NDST3O95803 873 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 FTCDO95954 541 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 CEACAM5P06731 702 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 PROS1P07225 676 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 C1QTNF9P0C862 333 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 CDK4P11802 303 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 MYCLP1P12525 358 aaPredicted RBP8.77□□□□□ -1.01
SSBP4-208ENST00000600628 JUNDP17535 347 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 CKMT2P17540 419 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 CTPS1P17812 591 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 NFKB1P19838 968 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 RBL1P28749 1068 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 SPINT3P49223 89 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 DCDC1P59894 354 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 CDK18Q07002 472 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 SIX1Q15475 284 aaPredicted RBP8.77□□□□□ -1.01
SSBP4-208ENST00000600628 OASLQ15646 514 aaKnown RBP8.77□□□□□ -1.01
SSBP4-208ENST00000600628 ZNF542PQ5EBM4 170 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 KAZNQ674X7 775 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 KCTD11Q693B1 232 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 OGFOD3Q6PK18 319 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 UNQ6494/PRO21346Q6UXR6 183 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 RANBP10Q6VN20 620 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 CCNI2Q6ZMN8 369 aaPredicted RBP8.77□□□□□ -1.01
SSBP4-208ENST00000600628 ZC3H18Q86VM9 953 aaKnown RBP8.77□□□□□ -1.01
SSBP4-208ENST00000600628 PHACTR4Q8IZ21 702 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 RBFAQ8N0V3 343 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 PDCD6IPQ8WUM4 868 aaKnown RBP8.77□□□□□ -1.01
SSBP4-208ENST00000600628 BTN2A2Q8WVV5 523 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 OR1E3Q8WZA6 343 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 NUS1Q96E22 293 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 CNDP2Q96KP4 475 aaKnown RBP8.77□□□□□ -1.01
SSBP4-208ENST00000600628 WDR92Q96MX6 357 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 C19orf43Q9BQ61 176 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 ARNT2Q9HBZ2 717 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 DNAJC28Q9NX36 388 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 PACSIN2Q9UNF0 486 aaPredicted RBP8.77□□□□□ -1.01
SSBP4-208ENST00000600628 SLC17A4Q9Y2C5 497 aa8.77□□□□□ -1.01
SSBP4-208ENST00000600628 C5orf60A6NFR6 353 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 NEMP2A6NFY4 417 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 PRR19A6NJB7 356 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 A8MX80 341 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 GOLGA6L6A8MZA4 724 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 ZNF189O75820 626 aaPredicted RBP8.76□□□□□ -1.01
SSBP4-208ENST00000600628 TJP3O95049 919 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 GP1BAP07359 652 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 RBP3P10745 1247 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 CA4P22748 312 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 PSMA3P25788 255 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 HMGCLP35914 325 aa8.76□□□□□ -1.01
SSBP4-208ENST00000600628 THOP1P52888 689 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms