RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 RALYQ9UKM9 306 aaKnown RBP12.14□□□□□ -0.47
LIG1-217ENST00000599165 CLCA2Q9UQC9 943 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 EPN1Q9Y6I3 576 aaPredicted RBP12.14□□□□□ -0.47
LIG1-217ENST00000599165 hCG_1818297A0A087WSY0 165 aa12.13□□□□□ -0.47
LIG1-217ENST00000599165 TNFRSF10CO14798 259 aa12.13□□□□□ -0.47
LIG1-217ENST00000599165 SPOPO43791 374 aa12.13□□□□□ -0.47
LIG1-217ENST00000599165 CEACAM5P06731 702 aa12.13□□□□□ -0.47
LIG1-217ENST00000599165 ANXA6P08133 673 aa12.13□□□□□ -0.47
LIG1-217ENST00000599165 CYP2A6P11509 494 aaPredicted RBP12.13□□□□□ -0.47
LIG1-217ENST00000599165 MYCLP1P12525 358 aaPredicted RBP12.13□□□□□ -0.47
LIG1-217ENST00000599165 HTR1BP28222 390 aa12.13□□□□□ -0.47
LIG1-217ENST00000599165 TEAD1P28347 426 aa12.13□□□□□ -0.47
LIG1-217ENST00000599165 CD68P34810 354 aaPredicted RBP12.13□□□□□ -0.47
LIG1-217ENST00000599165 CD86P42081 329 aa12.13□□□□□ -0.47
LIG1-217ENST00000599165 CDK3Q00526 305 aa12.13□□□□□ -0.47
LIG1-217ENST00000599165 E2F1Q01094 437 aa12.13□□□□□ -0.47
LIG1-217ENST00000599165 DPTQ07507 201 aa12.13□□□□□ -0.47
LIG1-217ENST00000599165 WASHC5Q12768 1159 aa12.13□□□□□ -0.47
LIG1-217ENST00000599165 RTP5Q14D33 572 aa12.13□□□□□ -0.47
LIG1-217ENST00000599165 C11orf63Q6NUN7 778 aa12.13□□□□□ -0.47
LIG1-217ENST00000599165 USP45Q70EL2 814 aa12.13□□□□□ -0.47
LIG1-217ENST00000599165 NRROSQ86YC3 692 aa12.13□□□□□ -0.47
LIG1-217ENST00000599165 RFX6Q8HWS3 928 aa12.13□□□□□ -0.47
LIG1-217ENST00000599165 KATNAL2Q8IYT4 538 aa12.13□□□□□ -0.47
LIG1-217ENST00000599165 FSTL5Q8N475 847 aaPredicted RBP12.13□□□□□ -0.47
LIG1-217ENST00000599165 PAF1Q8N7H5 531 aa12.13□□□□□ -0.47
LIG1-217ENST00000599165 ACRBPQ8NEB7 543 aa12.13□□□□□ -0.47
LIG1-217ENST00000599165 LPCAT1Q8NF37 534 aa12.13□□□□□ -0.47
LIG1-217ENST00000599165 IMP4Q96G21 291 aaKnown RBP12.13□□□□□ -0.47
LIG1-217ENST00000599165 TMEM168Q9H0V1 697 aa12.13□□□□□ -0.47
LIG1-217ENST00000599165 PCDH9Q9HC56 1237 aa12.13□□□□□ -0.47
LIG1-217ENST00000599165 DDX56Q9NY93 547 aaKnown RBP12.13□□□□□ -0.47
LIG1-217ENST00000599165 RAXQ9Y2V3 346 aa12.13□□□□□ -0.47
LIG1-217ENST00000599165 TTLL3Q9Y4R7 772 aa12.13□□□□□ -0.47
LIG1-217ENST00000599165 PCYT1BQ9Y5K3 369 aaPredicted RBP12.13□□□□□ -0.47
LIG1-217ENST00000599165 ITPR1Q14643 2758 aa12.13□□□□□ -0.47
LIG1-217ENST00000599165 PRSS38A1L453 326 aa12.12□□□□□ -0.47
LIG1-217ENST00000599165 CPED1A4D0V7 1026 aa12.12□□□□□ -0.47
LIG1-217ENST00000599165 CACNB4O00305 520 aaPredicted RBP12.12□□□□□ -0.47
LIG1-217ENST00000599165 TLX3O43711 291 aaPredicted RBP12.12□□□□□ -0.47
LIG1-217ENST00000599165 NOBOXO60393 691 aa12.12□□□□□ -0.47
LIG1-217ENST00000599165 CST8O60676 142 aa12.12□□□□□ -0.47
LIG1-217ENST00000599165 CLDN7O95471 211 aa12.12□□□□□ -0.47
LIG1-217ENST00000599165 CES1P23141 567 aa12.12□□□□□ -0.47
LIG1-217ENST00000599165 PTPN3P26045 913 aa12.12□□□□□ -0.47
LIG1-217ENST00000599165 POLD2P49005 469 aa12.12□□□□□ -0.47
LIG1-217ENST00000599165 BLKP51451 505 aa12.12□□□□□ -0.47
LIG1-217ENST00000599165 AP1B1Q10567 949 aa12.12□□□□□ -0.47
LIG1-217ENST00000599165 PDK1Q15118 436 aa12.12□□□□□ -0.47
LIG1-217ENST00000599165 ELOCQ15369 112 aa12.12□□□□□ -0.47
LIG1-217ENST00000599165 NR0B2Q15466 257 aa12.12□□□□□ -0.47
LIG1-217ENST00000599165 OGFOD3Q6PK18 319 aa12.12□□□□□ -0.47
LIG1-217ENST00000599165 LVRNQ6Q4G3 990 aa12.12□□□□□ -0.47
LIG1-217ENST00000599165 GPR156Q8NFN8 814 aa12.12□□□□□ -0.47
LIG1-217ENST00000599165 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.12□□□□□ -0.47
LIG1-217ENST00000599165 NRSN2Q9GZP1 204 aa12.12□□□□□ -0.47
LIG1-217ENST00000599165 CNOT6Q9ULM6 557 aaKnown RBP12.12□□□□□ -0.47
LIG1-217ENST00000599165 SLC17A4Q9Y2C5 497 aa12.12□□□□□ -0.47
LIG1-217ENST00000599165 GPSM3Q9Y4H4 160 aa12.12□□□□□ -0.47
LIG1-217ENST00000599165 PMS2P1A4D2B8 440 aa12.11□□□□□ -0.47
LIG1-217ENST00000599165 TNFP01375 233 aa12.11□□□□□ -0.47
LIG1-217ENST00000599165 ZNF30P17039 623 aa12.11□□□□□ -0.47
LIG1-217ENST00000599165 CYLC1P35663 651 aaPredicted RBP12.11□□□□□ -0.47
LIG1-217ENST00000599165 DUSP3P51452 185 aaPredicted RBP12.11□□□□□ -0.47
LIG1-217ENST00000599165 RPL26P61254 145 aaKnown RBP12.11□□□□□ -0.47
LIG1-217ENST00000599165 ARHGEF7Q14155 803 aa12.11□□□□□ -0.47
LIG1-217ENST00000599165 GALNT3Q14435 633 aa12.11□□□□□ -0.47
LIG1-217ENST00000599165 HS1BP3Q53T59 392 aa12.11□□□□□ -0.47
LIG1-217ENST00000599165 KAZNQ674X7 775 aa12.11□□□□□ -0.47
LIG1-217ENST00000599165 ADAMTSL4Q6UY14 1074 aa12.11□□□□□ -0.47
LIG1-217ENST00000599165 ZNF765Q7L2R6 523 aa12.11□□□□□ -0.47
LIG1-217ENST00000599165 TRIM74Q86UV6 250 aa12.11□□□□□ -0.47
LIG1-217ENST00000599165 NLRP8Q86W28 1048 aa12.11□□□□□ -0.47
LIG1-217ENST00000599165 C17orf82Q86X59 251 aaPredicted RBP12.11□□□□□ -0.47
LIG1-217ENST00000599165 TMTC1Q8IUR5 882 aa12.11□□□□□ -0.47
LIG1-217ENST00000599165 ARL10Q8N8L6 244 aa12.11□□□□□ -0.47
LIG1-217ENST00000599165 LRRC57Q8N9N7 239 aa12.11□□□□□ -0.47
LIG1-217ENST00000599165 SPATA22Q8NHS9 363 aa12.11□□□□□ -0.47
LIG1-217ENST00000599165 MAPK15Q8TD08 544 aa12.11□□□□□ -0.47
LIG1-217ENST00000599165 GPBAR1Q8TDU6 330 aa12.11□□□□□ -0.47
LIG1-217ENST00000599165 SCARF2Q96GP6 870 aaPredicted RBP12.11□□□□□ -0.47
LIG1-217ENST00000599165 COX14Q96I36 57 aa12.11□□□□□ -0.47
LIG1-217ENST00000599165 ZNF830Q96NB3 372 aaPredicted RBP12.11□□□□□ -0.47
LIG1-217ENST00000599165 AGAP3Q96P47 875 aa12.11□□□□□ -0.47
LIG1-217ENST00000599165 CYP4F12Q9HCS2 524 aa12.11□□□□□ -0.47
LIG1-217ENST00000599165 SIRPGQ9P1W8 387 aa12.11□□□□□ -0.47
LIG1-217ENST00000599165 TRIM10Q9UDY6 481 aa12.11□□□□□ -0.47
LIG1-217ENST00000599165 PADI4Q9UM07 663 aa12.11□□□□□ -0.47
LIG1-217ENST00000599165 RPL26L1Q9UNX3 145 aaKnown RBP12.11□□□□□ -0.47
LIG1-217ENST00000599165 PLEKHM1Q9Y4G2 1056 aa12.11□□□□□ -0.47
LIG1-217ENST00000599165 A0A1W2PQM1 296 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 GRID2IPA4D2P6 1211 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 BTNL10A8MVZ5 291 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 FADS2P1A8MWK0 482 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 ANKRD66B4E2M5 251 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 NTN3O00634 580 aaPredicted RBP12.1□□□□□ -0.47
LIG1-217ENST00000599165 PPP1R12AO14974 1030 aaPredicted RBP12.1□□□□□ -0.47
LIG1-217ENST00000599165 PJA2O43164 708 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 CSO75390 466 aaKnown RBP12.1□□□□□ -0.47
LIG1-217ENST00000599165 MT-CYBP00156 380 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms