RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 Q6ZVL8 140 aa12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 POLNQ7Z5Q5 900 aa12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 TRIM74Q86UV6 250 aa12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 CPNE8Q86YQ8 564 aa12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 ATPAF2Q8N5M1 289 aa12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 ZDHHC1Q8WTX9 485 aa12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 JPH3Q8WXH2 748 aaPredicted RBP12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 EXTL1Q92935 676 aa12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 NAP1L5Q96NT1 182 aaPredicted RBP12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 CSPG4P5Q96PW8 444 aa12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 MGME1Q9BQP7 344 aa12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 NUDT22Q9BRQ3 303 aa12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 TEX101Q9BY14 249 aa12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 PHPT1Q9NRX4 125 aaPredicted RBP12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 TAAR2Q9P1P5 351 aa12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 ACSL6Q9UKU0 697 aa12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 SUFUQ9UMX1 484 aa12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 SCINQ9Y6U3 715 aa12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 TMX2-CTNND1H3BSU7 103 aa12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 NUDT21O43809 227 aaKnown RBP12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 MFSD11O43934 449 aa12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 MAP3K6O95382 1288 aa12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 ECEL1O95672 775 aa12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 SOD1P00441 154 aa12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 FGF1P05230 155 aa12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 PDHA1P08559 390 aa12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 RARAP10276 462 aa12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 GZMAP12544 262 aa12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 CCL4P13236 92 aa12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 PNLIPP16233 465 aa12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 ALDH4A1P30038 563 aa12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 ARL4AP40617 200 aa12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 HCAR3P49019 387 aa12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 ARSDP51689 593 aa12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 CYP4F2P78329 520 aa12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 NFKB2Q00653 900 aa12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 KLHL30Q0D2K2 578 aa12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 MMRN1Q13201 1228 aa12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 IHHQ14623 411 aa12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 ZNF574Q6ZN55 896 aaPredicted RBP12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 USP53Q70EK8 1073 aa12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 C17orf82Q86X59 251 aaPredicted RBP12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 ZNF761Q86XN6 746 aaPredicted RBP12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 PSTKQ8IV42 348 aaKnown RBP12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 NAGSQ8N159 534 aa12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 LZTR1Q8N653 840 aa12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 KIAA1524Q8TCG1 905 aa12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 GPBAR1Q8TDU6 330 aa12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 LRRN4Q8WUT4 740 aa12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 ZNF599Q96NL3 588 aa12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 TRIM4Q9C037 500 aa12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 PCDH18Q9HCL0 1135 aa12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 NT5MQ9NPB1 228 aa12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 AIPL1Q9NZN9 384 aa12.08□□□□□ -0.48
SOX2-OT-228ENST00000597828 NVLO15381 856 aaKnown RBP12.07□□□□□ -0.48
SOX2-OT-228ENST00000597828 SLC28A2O43868 658 aa12.07□□□□□ -0.48
SOX2-OT-228ENST00000597828 PGLSO95336 258 aa12.07□□□□□ -0.48
SOX2-OT-228ENST00000597828 CPNE6O95741 557 aa12.07□□□□□ -0.48
SOX2-OT-228ENST00000597828 CD48P09326 243 aa12.07□□□□□ -0.48
SOX2-OT-228ENST00000597828 CYP2A6P11509 494 aaPredicted RBP12.07□□□□□ -0.48
SOX2-OT-228ENST00000597828 CSF2RBP32927 897 aa12.07□□□□□ -0.48
SOX2-OT-228ENST00000597828 PCK1P35558 622 aa12.07□□□□□ -0.48
SOX2-OT-228ENST00000597828 MMP13P45452 471 aa12.07□□□□□ -0.48
SOX2-OT-228ENST00000597828 CTBSQ01459 385 aa12.07□□□□□ -0.48
SOX2-OT-228ENST00000597828 SLC25A11Q02978 314 aaKnown RBP12.07□□□□□ -0.48
SOX2-OT-228ENST00000597828 NFATC3Q12968 1075 aa12.07□□□□□ -0.48
SOX2-OT-228ENST00000597828 TSR1Q2NL82 804 aaKnown RBP12.07□□□□□ -0.48
SOX2-OT-228ENST00000597828 MANEAQ5SRI9 462 aa12.07□□□□□ -0.48
SOX2-OT-228ENST00000597828 FAM182AQ5T1J6 154 aa12.07□□□□□ -0.48
SOX2-OT-228ENST00000597828 NKAIN2Q5VXU1 208 aa12.07□□□□□ -0.48
SOX2-OT-228ENST00000597828 CAVIN1Q6NZI2 390 aaKnown RBP12.07□□□□□ -0.48
SOX2-OT-228ENST00000597828 PRICKLE2Q7Z3G6 844 aa12.07□□□□□ -0.48
SOX2-OT-228ENST00000597828 ZNF438Q7Z4V0 828 aa12.07□□□□□ -0.48
SOX2-OT-228ENST00000597828 CBARPQ8N350 705 aaPredicted RBP12.07□□□□□ -0.48
SOX2-OT-228ENST00000597828 HTR3CQ8WXA8 447 aa12.07□□□□□ -0.48
SOX2-OT-228ENST00000597828 SPOCK2Q92563 424 aa12.07□□□□□ -0.48
SOX2-OT-228ENST00000597828 SGF29Q96ES7 293 aa12.07□□□□□ -0.48
SOX2-OT-228ENST00000597828 CCDC74BQ96LY2 380 aa12.07□□□□□ -0.48
SOX2-OT-228ENST00000597828 AGAP2Q99490 1192 aa12.07□□□□□ -0.48
SOX2-OT-228ENST00000597828 CMKLR1Q99788 373 aa12.07□□□□□ -0.48
SOX2-OT-228ENST00000597828 GSDMCQ9BYG8 508 aa12.07□□□□□ -0.48
SOX2-OT-228ENST00000597828 ISCUQ9H1K1 167 aa12.07□□□□□ -0.48
SOX2-OT-228ENST00000597828 TMEM9Q9P0T7 183 aa12.07□□□□□ -0.48
SOX2-OT-228ENST00000597828 PHTF1Q9UMS5 762 aa12.07□□□□□ -0.48
SOX2-OT-228ENST00000597828 TMEM98Q9Y2Y6 226 aa12.07□□□□□ -0.48
SOX2-OT-228ENST00000597828 PCDHGA4Q9Y5G9 962 aa12.07□□□□□ -0.48
SOX2-OT-228ENST00000597828 PCYT1BQ9Y5K3 369 aaPredicted RBP12.07□□□□□ -0.48
SOX2-OT-228ENST00000597828 DOPEY2Q9Y3R5 2298 aa12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 IGHV5-10-1A0A0J9YXX1 117 aa12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 A0A1B0GTH6 734 aa12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 CAPN8A6NHC0 703 aa12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 CYSRT1A8MQ03 144 aa12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 RHPN2P1A8MT19 583 aa12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 PPM1DO15297 605 aa12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 MPSTP25325 297 aa12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 CD1CP29017 333 aa12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 GJC1P36383 396 aa12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 HSPA9P38646 679 aaKnown RBP12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 ADCY8P40145 1251 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms