RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 PRAMEF11O60813 436 aa16.47■□□□□ 0.23
SHKBP1-215ENST00000597649 GPD1P21695 349 aa16.47■□□□□ 0.23
SHKBP1-215ENST00000597649 UBAP2LQ14157 1087 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-215ENST00000597649 NR1D2Q14995 579 aa16.47■□□□□ 0.23
SHKBP1-215ENST00000597649 TMEM164Q5U3C3 297 aa16.47■□□□□ 0.23
SHKBP1-215ENST00000597649 PNCKQ6P2M8 343 aa16.47■□□□□ 0.23
SHKBP1-215ENST00000597649 BORAQ6PGQ7 559 aa16.47■□□□□ 0.23
SHKBP1-215ENST00000597649 ZNF564Q8TBZ8 553 aaPredicted RBP16.47■□□□□ 0.23
SHKBP1-215ENST00000597649 ZDHHC1Q8WTX9 485 aa16.47■□□□□ 0.23
SHKBP1-215ENST00000597649 PTCD2Q8WV60 388 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-215ENST00000597649 PATE1Q8WXA2 126 aa16.47■□□□□ 0.23
SHKBP1-215ENST00000597649 CELF6Q96J87 481 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-215ENST00000597649 CCDC74BQ96LY2 380 aa16.47■□□□□ 0.23
SHKBP1-215ENST00000597649 TAAR9Q96RI9 348 aa16.47■□□□□ 0.23
SHKBP1-215ENST00000597649 SYT11Q9BT88 431 aa16.47■□□□□ 0.23
SHKBP1-215ENST00000597649 SLC39A8Q9C0K1 460 aa16.47■□□□□ 0.23
SHKBP1-215ENST00000597649 EPN3Q9H201 632 aa16.47■□□□□ 0.23
SHKBP1-215ENST00000597649 ADNPQ9H2P0 1102 aa16.47■□□□□ 0.23
SHKBP1-215ENST00000597649 MOSPD1Q9UJG1 213 aa16.47■□□□□ 0.23
SHKBP1-215ENST00000597649 PCDHGA3Q9Y5H0 932 aa16.47■□□□□ 0.23
SHKBP1-215ENST00000597649 ZFC3H1O60293 1989 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-215ENST00000597649 ANKRD36A6QL64 1941 aa16.47■□□□□ 0.23
SHKBP1-215ENST00000597649 SSU72P8A0A1W2PR75 194 aa16.46■□□□□ 0.23
SHKBP1-215ENST00000597649 TCRBV5S1A1TA0A578 114 aa16.46■□□□□ 0.23
SHKBP1-215ENST00000597649 SIGLEC16A6NMB1 481 aa16.46■□□□□ 0.23
SHKBP1-215ENST00000597649 DDX3XO00571 662 aaKnown RBP eCLIP16.46■□□□□ 0.23
SHKBP1-215ENST00000597649 ECEL1O95672 775 aa16.46■□□□□ 0.23
SHKBP1-215ENST00000597649 CEACAM5P06731 702 aa16.46■□□□□ 0.23
SHKBP1-215ENST00000597649 ELFN1P0C7U0 828 aa16.46■□□□□ 0.23
SHKBP1-215ENST00000597649 CCNB1P14635 433 aa16.46■□□□□ 0.23
SHKBP1-215ENST00000597649 LIFP15018 202 aa16.46■□□□□ 0.23
SHKBP1-215ENST00000597649 KELP23276 732 aa16.46■□□□□ 0.23
SHKBP1-215ENST00000597649 MPSTP25325 297 aa16.46■□□□□ 0.23
SHKBP1-215ENST00000597649 AK4P27144 223 aaPredicted RBP16.46■□□□□ 0.23
SHKBP1-215ENST00000597649 UGT1A3P35503 534 aa16.46■□□□□ 0.23
SHKBP1-215ENST00000597649 CSNK1DP48730 415 aa16.46■□□□□ 0.23
SHKBP1-215ENST00000597649 PAPOLAP51003 745 aaKnown RBP16.46■□□□□ 0.23
SHKBP1-215ENST00000597649 POLE2P56282 527 aa16.46■□□□□ 0.23
SHKBP1-215ENST00000597649 GSCP56915 257 aaPredicted RBP16.46■□□□□ 0.23
SHKBP1-215ENST00000597649 CFAP58Q5T655 872 aa16.46■□□□□ 0.23
SHKBP1-215ENST00000597649 NKAIN2Q5VXU1 208 aa16.46■□□□□ 0.23
SHKBP1-215ENST00000597649 ACAD10Q6JQN1 1059 aa16.46■□□□□ 0.23
SHKBP1-215ENST00000597649 CHP1Q99653 195 aa16.46■□□□□ 0.23
SHKBP1-215ENST00000597649 ATP13A3Q9H7F0 1226 aa16.46■□□□□ 0.23
SHKBP1-215ENST00000597649 SUDS3Q9H7L9 328 aaPredicted RBP16.46■□□□□ 0.23
SHKBP1-215ENST00000597649 CATSPERBQ9H7T0 1116 aa16.46■□□□□ 0.23
SHKBP1-215ENST00000597649 NHEJ1Q9H9Q4 299 aaPredicted RBP16.46■□□□□ 0.23
SHKBP1-215ENST00000597649 CARS2Q9HA77 564 aaKnown RBP16.46■□□□□ 0.23
SHKBP1-215ENST00000597649 ADAM22Q9P0K1 906 aa16.46■□□□□ 0.23
SHKBP1-215ENST00000597649 TAAR2Q9P1P5 351 aa16.46■□□□□ 0.23
SHKBP1-215ENST00000597649 B3GALT1Q9Y5Z6 326 aa16.46■□□□□ 0.23
SHKBP1-215ENST00000597649 RHPN2P1A8MT19 583 aa16.45■□□□□ 0.22
SHKBP1-215ENST00000597649 TRAFD1O14545 582 aaPredicted RBP16.45■□□□□ 0.22
SHKBP1-215ENST00000597649 HGSO14964 777 aaPredicted RBP16.45■□□□□ 0.22
SHKBP1-215ENST00000597649 PPM1DO15297 605 aa16.45■□□□□ 0.22
SHKBP1-215ENST00000597649 CALB1P05937 261 aa16.45■□□□□ 0.22
SHKBP1-215ENST00000597649 PTMAP06454 111 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-215ENST00000597649 GZMAP12544 262 aa16.45■□□□□ 0.22
SHKBP1-215ENST00000597649 ZNF143P52747 638 aaPredicted RBP16.45■□□□□ 0.22
SHKBP1-215ENST00000597649 LIMK2P53671 638 aa16.45■□□□□ 0.22
SHKBP1-215ENST00000597649 RPL7AP62424 266 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-215ENST00000597649 KCNAB2Q13303 367 aa16.45■□□□□ 0.22
SHKBP1-215ENST00000597649 CCDC122Q5T0U0 273 aa16.45■□□□□ 0.22
SHKBP1-215ENST00000597649 DPPA4Q7L190 304 aa16.45■□□□□ 0.22
SHKBP1-215ENST00000597649 PHF13Q86YI8 300 aaPredicted RBP16.45■□□□□ 0.22
SHKBP1-215ENST00000597649 TMTC1Q8IUR5 882 aa16.45■□□□□ 0.22
SHKBP1-215ENST00000597649 KIAA1524Q8TCG1 905 aa16.45■□□□□ 0.22
SHKBP1-215ENST00000597649 COQ10AQ96MF6 247 aa16.45■□□□□ 0.22
SHKBP1-215ENST00000597649 SELENOOQ9BVL4 669 aa16.45■□□□□ 0.22
SHKBP1-215ENST00000597649 WDR26Q9H7D7 661 aa16.45■□□□□ 0.22
SHKBP1-215ENST00000597649 GPATCH2LQ9NWQ4 482 aa16.45■□□□□ 0.22
SHKBP1-215ENST00000597649 AKAP7Q9P0M2 348 aaPredicted RBP16.45■□□□□ 0.22
SHKBP1-215ENST00000597649 TMEM9Q9P0T7 183 aa16.45■□□□□ 0.22
SHKBP1-215ENST00000597649 A0A087X0T9 212 aa16.44■□□□□ 0.22
SHKBP1-215ENST00000597649 TTC24A2A3L6 582 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-215ENST00000597649 CLEC18AA5D8T8 446 aa16.44■□□□□ 0.22
SHKBP1-215ENST00000597649 NRDCO43847 1150 aa16.44■□□□□ 0.22
SHKBP1-215ENST00000597649 FAM228BP0C875 321 aa16.44■□□□□ 0.22
SHKBP1-215ENST00000597649 SERPINA4P29622 427 aa16.44■□□□□ 0.22
SHKBP1-215ENST00000597649 CYLC1P35663 651 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-215ENST00000597649 NDST2P52849 883 aa16.44■□□□□ 0.22
SHKBP1-215ENST00000597649 FOXK1P85037 733 aa16.44■□□□□ 0.22
SHKBP1-215ENST00000597649 ALKBH5Q6P6C2 394 aaKnown RBP16.44■□□□□ 0.22
SHKBP1-215ENST00000597649 CLEC18BQ6UXF7 455 aa16.44■□□□□ 0.22
SHKBP1-215ENST00000597649 ARHGAP36Q6ZRI8 547 aa16.44■□□□□ 0.22
SHKBP1-215ENST00000597649 ARHGAP12Q8IWW6 846 aa16.44■□□□□ 0.22
SHKBP1-215ENST00000597649 CBARPQ8N350 705 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-215ENST00000597649 CLEC18CQ8NCF0 446 aa16.44■□□□□ 0.22
SHKBP1-215ENST00000597649 C3orf20Q8ND61 904 aa16.44■□□□□ 0.22
SHKBP1-215ENST00000597649 ART4Q93070 314 aa16.44■□□□□ 0.22
SHKBP1-215ENST00000597649 BAG1Q99933 345 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-215ENST00000597649 TEX101Q9BY14 249 aa16.44■□□□□ 0.22
SHKBP1-215ENST00000597649 FRMD8Q9BZ67 464 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-215ENST00000597649 CDH19Q9H159 772 aa16.44■□□□□ 0.22
SHKBP1-215ENST00000597649 OCIAD1Q9NX40 245 aa16.44■□□□□ 0.22
SHKBP1-215ENST00000597649 TAS2R14Q9NYV8 317 aa16.44■□□□□ 0.22
SHKBP1-215ENST00000597649 B4GALT6Q9UBX8 382 aa16.44■□□□□ 0.22
SHKBP1-215ENST00000597649 FGF10O15520 208 aaPredicted RBP16.43■□□□□ 0.22
SHKBP1-215ENST00000597649 NKX2-8O15522 239 aa16.43■□□□□ 0.22
SHKBP1-215ENST00000597649 PALMO75781 387 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms