RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 PATE1Q8WXA2 126 aa10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 CCDC74BQ96LY2 380 aa10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 ZNF599Q96NL3 588 aa10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 TAAR9Q96RI9 348 aa10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 NUDCD1Q96RS6 583 aa10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 TEX101Q9BY14 249 aa10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 ZMYND15Q9H091 742 aa10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 STARD5Q9NSY2 213 aa10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 CNOT8Q9UFF9 292 aaKnown RBP10.55□□□□□ -0.72
CHMP2A-202ENST00000596708 IGHV5-10-1A0A0J9YXX1 117 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 STMND1H3BQB6 276 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 H3BRJ5 948 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 HGSO14964 777 aaPredicted RBP10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 SOCS5O75159 536 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 PPFIA2O75334 1257 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 LRCH4O75427 683 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 FTLP02792 175 aaPredicted RBP10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 CTPS1P17812 591 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 ITGB6P18564 788 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 WT1P19544 449 aaPredicted RBP10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 MPSTP25325 297 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 HSPA9P38646 679 aaKnown RBP10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 ADCY8P40145 1251 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 ACTR1BP42025 376 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 POLD2P49005 469 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 ACTR1AP61163 376 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 MAXP61244 160 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 TRAF2Q12933 501 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 ASIC2Q16515 512 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 STX1AQ16623 288 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 CLPPQ16740 277 aaPredicted RBP10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 ARMC12Q5T9G4 340 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 NKAIN2Q5VXU1 208 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 TMCO3Q6UWJ1 677 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 RBM43Q6ZSC3 357 aaKnown RBP10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 Q6ZVL8 140 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 HSD11B1LQ7Z5J1 315 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 C17orf82Q86X59 251 aaPredicted RBP10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 PSTKQ8IV42 348 aaKnown RBP10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 NAGSQ8N159 534 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 PGBD5Q8N414 524 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 IL22RA1Q8N6P7 574 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 FNIP1Q8TF40 1166 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 ZNF653Q96CK0 615 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 DTD2Q96FN9 168 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 FRMD8Q9BZ67 464 aaPredicted RBP10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 TRIM7Q9C029 511 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 B3GNT4Q9C0J1 378 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 HAUS4Q9H6D7 363 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 NOD2Q9HC29 1040 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 MYO1AQ9UBC5 1043 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 CD84Q9UIB8 345 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 MYO6Q9UM54 1294 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 PLEKHM1Q9Y4G2 1056 aa10.54□□□□□ -0.72
CHMP2A-202ENST00000596708 ZNF106Q9H2Y7 1883 aaKnown RBP10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 TRBV23OR9-2A0A075B6M9 112 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 LRRC53A6NM62 1247 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 PSMD11O00231 422 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 PPM1DO15297 605 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 IVLP07476 585 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 FGF3P11487 239 aaPredicted RBP10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 GZMAP12544 262 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 ATP1A3P13637 1013 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 CR2P20023 1033 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 LHCGRP22888 699 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 CD1CP29017 333 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 CSTF2P33240 577 aaKnown RBP eCLIP10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 GPR3P46089 330 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 LIMK2P53671 638 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 ITKQ08881 620 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 TRA2AQ13595 282 aaKnown RBP eCLIP10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 DPYSQ14117 519 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 NR1D2Q14995 579 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 PTPRRQ15256 657 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 SMTNL2Q2TAL5 461 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 MARC1Q5VT66 337 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 CYP4V2Q6ZWL3 525 aaPredicted RBP10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 USP45Q70EL2 814 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 APTXQ7Z2E3 356 aaKnown RBP10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 ZNF438Q7Z4V0 828 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 TSPAN33Q86UF1 283 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 NRSN1Q8IZ57 195 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 NDUFAF2Q8N183 169 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 CBARPQ8N350 705 aaPredicted RBP10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 ATPAF2Q8N5M1 289 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 AGBL5Q8NDL9 886 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 CCDC112Q8NEF3 446 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 PTCD2Q8WV60 388 aaKnown RBP10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 HTR3CQ8WXA8 447 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 HSPH1Q92598 858 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 NKD1Q969G9 470 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 SCRN2Q96FV2 425 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 AHCYL2Q96HN2 611 aaKnown RBP10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 SEMA3CQ99985 751 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 SYT11Q9BT88 431 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 CDH19Q9H159 772 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 MRPL47Q9HD33 250 aaKnown RBP10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 ETNK2Q9NVF9 386 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 SLC39A1Q9NY26 324 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 KCNK4Q9NYG8 393 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms