RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 SOCS5O75159 536 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 PEX11BO96011 259 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 SOD1P00441 154 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 IVLP07476 585 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 CR2P20023 1033 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 MPSTP25325 297 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 VIPR1P32241 457 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 ADCY8P40145 1251 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 ETV3P41162 512 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 TSPAN7P41732 249 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 POLD2P49005 469 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 FOXK1P85037 733 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 SLC10A7Q0GE19 358 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 UBAP2LQ14157 1087 aaKnown RBP9.95□□□□□ -0.82
LIG1-209ENST00000596104 SYCP1Q15431 976 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 SKIDA1Q1XH10 827 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 CT47A1Q5JQC4 288 aaPredicted RBP9.95□□□□□ -0.82
LIG1-209ENST00000596104 TMCO4Q5TGY1 634 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 DCUN1D2Q6PH85 259 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 RFX8Q6ZV50 586 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 Q6ZVL8 140 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 CYP4V2Q6ZWL3 525 aaPredicted RBP9.95□□□□□ -0.82
LIG1-209ENST00000596104 HSD11B1LQ7Z5J1 315 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 MCOLN2Q8IZK6 566 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 CACNA2D3Q8IZS8 1091 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 PAF1Q8N7H5 531 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 CCDC112Q8NEF3 446 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 ENOX1Q8TC92 643 aaKnown RBP9.95□□□□□ -0.82
LIG1-209ENST00000596104 SLC45A3Q96JT2 553 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 KCTD15Q96SI1 283 aaPredicted RBP9.95□□□□□ -0.82
LIG1-209ENST00000596104 EIF3CQ99613 913 aaKnown RBP9.95□□□□□ -0.82
LIG1-209ENST00000596104 AGPAT1Q99943 283 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 SNRNP25Q9BV90 132 aaKnown RBP9.95□□□□□ -0.82
LIG1-209ENST00000596104 OCIAD1Q9NX40 245 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 KCTD5Q9NXV2 234 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 SEPT3Q9UH03 358 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 PCDHGC4Q9Y5F7 938 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 LRRK1Q38SD2 2015 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.94□□□□□ -0.82
LIG1-209ENST00000596104 A0A1W2PQ67 120 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 TTC24A2A3L6 582 aaPredicted RBP9.94□□□□□ -0.82
LIG1-209ENST00000596104 NPIPB15A6NHN6 443 aaPredicted RBP9.94□□□□□ -0.82
LIG1-209ENST00000596104 ZNF891A8MT65 544 aaPredicted RBP9.94□□□□□ -0.82
LIG1-209ENST00000596104 PSMD11O00231 422 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 CPP00450 1065 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 CSTF2P33240 577 aaKnown RBP eCLIP9.94□□□□□ -0.82
LIG1-209ENST00000596104 CASRP41180 1078 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 ACTR1BP42025 376 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 CCR10P46092 362 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 FASLGP48023 281 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 RENBPP51606 427 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 ACTR1AP61163 376 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 TRAF2Q12933 501 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 MAMLD1Q13495 774 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 LBRQ14739 615 aaKnown RBP9.94□□□□□ -0.82
LIG1-209ENST00000596104 PTPRRQ15256 657 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 IGFBP7Q16270 282 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 FKBP15Q5T1M5 1219 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 ERMARDQ5T6L9 678 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 ANKS6Q68DC2 871 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 ACAD10Q6JQN1 1059 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 TMEM71Q6P5X7 295 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 LURAP1LQ8IV03 231 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 PGBD5Q8N414 524 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 ZNF599Q96NL3 588 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 CATSPER2Q96P56 530 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 OR2M4Q96R27 311 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 MCCC1Q96RQ3 725 aaPredicted RBP9.94□□□□□ -0.82
LIG1-209ENST00000596104 DPYSL5Q9BPU6 564 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 SYT11Q9BT88 431 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 ASPSCR1Q9BZE9 553 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 SEPT11Q9NVA2 429 aaKnown RBP9.94□□□□□ -0.82
LIG1-209ENST00000596104 SLC39A1Q9NY26 324 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 KCNK4Q9NYG8 393 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 TAS2R14Q9NYV8 317 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 PCSK1NQ9UHG2 260 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 ANAPC2Q9UJX6 822 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 PILRAQ9UKJ1 303 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 PLEKHM1Q9Y4G2 1056 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 DOPEY2Q9Y3R5 2298 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 SDK2Q58EX2 2172 aa9.94□□□□□ -0.82
LIG1-209ENST00000596104 EFCAB7A8K855 629 aa9.93□□□□□ -0.82
LIG1-209ENST00000596104 CAPN5O15484 640 aaPredicted RBP9.93□□□□□ -0.82
LIG1-209ENST00000596104 NKX2-8O15522 239 aa9.93□□□□□ -0.82
LIG1-209ENST00000596104 DAPK3O43293 454 aa9.93□□□□□ -0.82
LIG1-209ENST00000596104 DUX1O43812 170 aa9.93□□□□□ -0.82
LIG1-209ENST00000596104 TNFAIP3P21580 790 aa9.93□□□□□ -0.82
LIG1-209ENST00000596104 PSMA2P25787 234 aa9.93□□□□□ -0.82
LIG1-209ENST00000596104 HCAR3P49019 387 aa9.93□□□□□ -0.82
LIG1-209ENST00000596104 RAB15P59190 212 aa9.93□□□□□ -0.82
LIG1-209ENST00000596104 GPLD1P80108 840 aa9.93□□□□□ -0.82
LIG1-209ENST00000596104 DPTQ07507 201 aa9.93□□□□□ -0.82
LIG1-209ENST00000596104 BIRC2Q13490 618 aa9.93□□□□□ -0.82
LIG1-209ENST00000596104 PEX6Q13608 980 aa9.93□□□□□ -0.82
LIG1-209ENST00000596104 DPYSQ14117 519 aa9.93□□□□□ -0.82
LIG1-209ENST00000596104 PYCR3Q53H96 274 aa9.93□□□□□ -0.82
LIG1-209ENST00000596104 DCAF12Q5T6F0 453 aa9.93□□□□□ -0.82
LIG1-209ENST00000596104 DENND2CQ68D51 928 aa9.93□□□□□ -0.82
LIG1-209ENST00000596104 RAET1GQ6H3X3 334 aa9.93□□□□□ -0.82
LIG1-209ENST00000596104 PLEKHA7Q6IQ23 1121 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms