RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 DDX50Q9BQ39 737 aaKnown RBP12.94□□□□□ -0.34
SCAF1-202ENST00000595242 CCDC3Q9BQI4 270 aa12.94□□□□□ -0.34
SCAF1-202ENST00000595242 TMEM109Q9BVC6 243 aa12.94□□□□□ -0.34
SCAF1-202ENST00000595242 FAM204AQ9H8W3 233 aa12.94□□□□□ -0.34
SCAF1-202ENST00000595242 LRRC4Q9HBW1 653 aa12.94□□□□□ -0.34
SCAF1-202ENST00000595242 TMBIM4Q9HC24 238 aa12.94□□□□□ -0.34
SCAF1-202ENST00000595242 PCDH9Q9HC56 1237 aa12.94□□□□□ -0.34
SCAF1-202ENST00000595242 ASIC3Q9UHC3 531 aa12.94□□□□□ -0.34
SCAF1-202ENST00000595242 ANAPC2Q9UJX6 822 aa12.94□□□□□ -0.34
SCAF1-202ENST00000595242 DNPEPQ9ULA0 475 aa12.94□□□□□ -0.34
SCAF1-202ENST00000595242 GOLGA6CA6NDK9 693 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 A6NNZ2 444 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 HMGB1P1B2RPK0 211 aaPredicted RBP12.93□□□□□ -0.34
SCAF1-202ENST00000595242 C1QTNF3-AMACRE9PGA6 284 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 NTN3O00634 580 aaPredicted RBP12.93□□□□□ -0.34
SCAF1-202ENST00000595242 TPP1O14773 563 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 AQP9O43315 295 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 PRPSAP2O60256 369 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 KRT38O76015 456 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 KRT14P02533 472 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 GOLGA6DP0CG33 693 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 RPIAP49247 311 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 HDAC4P56524 1084 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 TBX4P57082 545 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 ZNF844Q08AG5 666 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 KCNAB2Q13303 367 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 LLGL1Q15334 1064 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 C15orf59Q2T9L4 293 aaPredicted RBP12.93□□□□□ -0.34
SCAF1-202ENST00000595242 SMTNL2Q2TAL5 461 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 ACCSLQ4AC99 568 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 DCAF6Q58WW2 860 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 MS4A13Q5J8X5 152 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 ZFYVE27Q5T4F4 411 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 PIP5KL1Q5T9C9 394 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 AGBL2Q5U5Z8 902 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 KAZNQ674X7 775 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 HIBCHQ6NVY1 386 aaPredicted RBP12.93□□□□□ -0.34
SCAF1-202ENST00000595242 BORAQ6PGQ7 559 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 CEP128Q6ZU80 1094 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 TRMT10CQ7L0Y3 403 aaKnown RBP12.93□□□□□ -0.34
SCAF1-202ENST00000595242 STRADAQ7RTN6 431 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 CROCCP2Q86T23 111 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 HORMAD1Q86X24 394 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 SCML4Q8N228 414 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 FAM76AQ8TAV0 307 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 FAM174AQ8TBP5 190 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 LMX1AQ8TE12 382 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 FAM172AQ8WUF8 416 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 UBLCP1Q8WVY7 318 aaPredicted RBP12.93□□□□□ -0.34
SCAF1-202ENST00000595242 GLMNQ92990 594 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 NAT6Q93015 286 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 ARL8AQ96BM9 186 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 ATP6V1G3Q96LB4 118 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 CFAP57Q96MR6 1250 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 ZNF670Q9BS34 389 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 BOCQ9BWV1 1114 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 PHACTR1Q9C0D0 580 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 STRADBQ9C0K7 418 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 GOLGA6AQ9NYA3 693 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.93□□□□□ -0.34
SCAF1-202ENST00000595242 KLF15Q9UIH9 416 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 ATP8A1Q9Y2Q0 1164 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 PCDHB11Q9Y5F2 797 aa12.93□□□□□ -0.34
SCAF1-202ENST00000595242 FBN2P35556 2912 aa12.92□□□□□ -0.34
SCAF1-202ENST00000595242 SPTY2D1-AS1A0A0U1RR47 76 aa12.92□□□□□ -0.34
SCAF1-202ENST00000595242 TMX2-CTNND1H3BSU7 103 aa12.92□□□□□ -0.34
SCAF1-202ENST00000595242 DNALI1O14645 258 aaPredicted RBP12.92□□□□□ -0.34
SCAF1-202ENST00000595242 MCF2LO15068 1137 aa12.92□□□□□ -0.34
SCAF1-202ENST00000595242 CST8O60676 142 aa12.92□□□□□ -0.34
SCAF1-202ENST00000595242 FBXO21O94952 628 aa12.92□□□□□ -0.34
SCAF1-202ENST00000595242 CD48P09326 243 aa12.92□□□□□ -0.34
SCAF1-202ENST00000595242 JMJD7P0C870 316 aa12.92□□□□□ -0.34
SCAF1-202ENST00000595242 JUNDP17535 347 aa12.92□□□□□ -0.34
SCAF1-202ENST00000595242 ITGA8P53708 1063 aa12.92□□□□□ -0.34
SCAF1-202ENST00000595242 POLE2P56282 527 aa12.92□□□□□ -0.34
SCAF1-202ENST00000595242 OTUD4Q01804 1114 aaKnown RBP12.92□□□□□ -0.34
SCAF1-202ENST00000595242 TFDP2Q14188 446 aa12.92□□□□□ -0.34
SCAF1-202ENST00000595242 DPYSL3Q14195 570 aa12.92□□□□□ -0.34
SCAF1-202ENST00000595242 NOMO1Q15155 1222 aa12.92□□□□□ -0.34
SCAF1-202ENST00000595242 TAF5Q15542 800 aa12.92□□□□□ -0.34
SCAF1-202ENST00000595242 MSANTD2Q6P1R3 559 aa12.92□□□□□ -0.34
SCAF1-202ENST00000595242 PARGQ86W56 976 aa12.92□□□□□ -0.34
SCAF1-202ENST00000595242 ZFAND4Q86XD8 727 aa12.92□□□□□ -0.34
SCAF1-202ENST00000595242 PSTKQ8IV42 348 aaKnown RBP12.92□□□□□ -0.34
SCAF1-202ENST00000595242 MAP7D3Q8IWC1 876 aa12.92□□□□□ -0.34
SCAF1-202ENST00000595242 SLC35F3Q8IY50 421 aa12.92□□□□□ -0.34
SCAF1-202ENST00000595242 KCTD6Q8NC69 237 aa12.92□□□□□ -0.34
SCAF1-202ENST00000595242 ACTL9Q8TC94 416 aa12.92□□□□□ -0.34
SCAF1-202ENST00000595242 NT5C3BQ969T7 300 aa12.92□□□□□ -0.34
SCAF1-202ENST00000595242 BMFQ96LC9 184 aa12.92□□□□□ -0.34
SCAF1-202ENST00000595242 RNF157Q96PX1 679 aa12.92□□□□□ -0.34
SCAF1-202ENST00000595242 SLC2A13Q96QE2 648 aa12.92□□□□□ -0.34
SCAF1-202ENST00000595242 SNRNP25Q9BV90 132 aaKnown RBP12.92□□□□□ -0.34
SCAF1-202ENST00000595242 PCDH18Q9HCL0 1135 aa12.92□□□□□ -0.34
SCAF1-202ENST00000595242 GPR27Q9NS67 375 aa12.92□□□□□ -0.34
SCAF1-202ENST00000595242 PISDQ9UG56 409 aa12.92□□□□□ -0.34
SCAF1-202ENST00000595242 PCSK1NQ9UHG2 260 aa12.92□□□□□ -0.34
SCAF1-202ENST00000595242 HS3ST3A1Q9Y663 406 aa12.92□□□□□ -0.34
SCAF1-202ENST00000595242 PRAMEF33A0A0G2JMD5 474 aa12.91□□□□□ -0.34
SCAF1-202ENST00000595242 POM121BA6NF01 834 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms