RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 PLK1P53350 603 aa13.24□□□□□ -0.29
VRK3-209ENST00000594948 RABGGTBP53611 331 aa13.24□□□□□ -0.29
VRK3-209ENST00000594948 EEFSECP57772 596 aaKnown RBP13.24□□□□□ -0.29
VRK3-209ENST00000594948 TNK2Q07912 1038 aa13.24□□□□□ -0.29
VRK3-209ENST00000594948 FSCN1Q16658 493 aaKnown RBP13.24□□□□□ -0.29
VRK3-209ENST00000594948 ZNF829Q3KNS6 432 aaPredicted RBP13.24□□□□□ -0.29
VRK3-209ENST00000594948 OGFOD2Q6N063 350 aa13.24□□□□□ -0.29
VRK3-209ENST00000594948 DUS1LQ6P1R4 473 aaKnown RBP13.24□□□□□ -0.29
VRK3-209ENST00000594948 BLOC1S3Q6QNY0 202 aa13.24□□□□□ -0.29
VRK3-209ENST00000594948 USP51Q70EK9 711 aa13.24□□□□□ -0.29
VRK3-209ENST00000594948 SPPL2CQ8IUH8 684 aa13.24□□□□□ -0.29
VRK3-209ENST00000594948 CMTR2Q8IYT2 770 aaKnown RBP13.24□□□□□ -0.29
VRK3-209ENST00000594948 DHRSXQ8N5I4 330 aa13.24□□□□□ -0.29
VRK3-209ENST00000594948 OR13J1Q8NGT2 312 aa13.24□□□□□ -0.29
VRK3-209ENST00000594948 DNAJB3Q8WWF6 145 aa13.24□□□□□ -0.29
VRK3-209ENST00000594948 MYLPFQ96A32 169 aa13.24□□□□□ -0.29
VRK3-209ENST00000594948 LRRC58Q96CX6 371 aa13.24□□□□□ -0.29
VRK3-209ENST00000594948 SLC39A3Q9BRY0 314 aa13.24□□□□□ -0.29
VRK3-209ENST00000594948 ALG9Q9H6U8 611 aa13.24□□□□□ -0.29
VRK3-209ENST00000594948 RPF2Q9H7B2 306 aaKnown RBP13.24□□□□□ -0.29
VRK3-209ENST00000594948 CXorf21Q9HAI6 301 aa13.24□□□□□ -0.29
VRK3-209ENST00000594948 SLC52A3Q9NQ40 469 aa13.24□□□□□ -0.29
VRK3-209ENST00000594948 TBC1D23Q9NUY8 699 aa13.24□□□□□ -0.29
VRK3-209ENST00000594948 INTS10Q9NVR2 710 aaKnown RBP13.24□□□□□ -0.29
VRK3-209ENST00000594948 SMPD3Q9NY59 655 aaPredicted RBP13.24□□□□□ -0.29
VRK3-209ENST00000594948 AURKCQ9UQB9 309 aa13.24□□□□□ -0.29
VRK3-209ENST00000594948 DNAJC15Q9Y5T4 150 aa13.24□□□□□ -0.29
VRK3-209ENST00000594948 RNF103-CHMP3A0A140T963 221 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 TCRBV5S2A0A599 114 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 H0YAE9 185 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 CLOCKO15516 846 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 PAGE1O75459 146 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 CDK14O94921 469 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 HNRNPCP07910 306 aaKnown RBP eCLIP13.23□□□□□ -0.29
VRK3-209ENST00000594948 CCR1P32246 355 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 STT3AP46977 705 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 SCNN1BP51168 640 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 RENBPP51606 427 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 SH3BP2P78314 561 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 CTBSQ01459 385 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 IRF5Q13568 498 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 AASDHQ4L235 1098 aaPredicted RBP13.23□□□□□ -0.29
VRK3-209ENST00000594948 PITRM1Q5JRX3 1037 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 GPR158Q5T848 1215 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 FAM171BQ6P995 826 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 ELMSAN1Q6PJG2 1045 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 TMEM207Q6UWW9 146 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 DLK2Q6UY11 383 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 RPS27LQ71UM5 84 aaKnown RBP13.23□□□□□ -0.29
VRK3-209ENST00000594948 DCP1BQ8IZD4 617 aaKnown RBP13.23□□□□□ -0.29
VRK3-209ENST00000594948 TWIST2Q8WVJ9 160 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 TMEM125Q96AQ2 219 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 SEZ6LQ9BYH1 1024 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 SMOC2Q9H3U7 446 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 ABCC13Q9NSE7 274 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 FADS3Q9Y5Q0 445 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 GRXCR2A6NFK2 248 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 H3BMQ9 156 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 CPNE6O95741 557 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 GNAO1P09471 354 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 PRR35P0CG20 571 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 ZNF12P17014 697 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 JUNBP17275 347 aaPredicted RBP13.23□□□□□ -0.29
VRK3-209ENST00000594948 MAGEA8P43361 318 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 BAG6P46379 1132 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 HLCSP50747 726 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 CDKN2DP55273 166 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 ACVR1Q04771 509 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 FXNQ16595 210 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 EFL1Q7Z2Z2 1120 aaKnown RBP13.23□□□□□ -0.29
VRK3-209ENST00000594948 CTU1Q7Z7A3 348 aaKnown RBP13.23□□□□□ -0.29
VRK3-209ENST00000594948 TRIM74Q86UV6 250 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 TRIM73Q86UV7 250 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.23□□□□□ -0.29
VRK3-209ENST00000594948 GPR150Q8NGU9 434 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 OSCP1Q8WVF1 389 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 RSPH1Q8WYR4 309 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 HDAC10Q969S8 669 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 COG8Q96MW5 612 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 ACBD6Q9BR61 282 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 SIK2Q9H0K1 926 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 TFB2MQ9H5Q4 396 aaKnown RBP13.23□□□□□ -0.29
VRK3-209ENST00000594948 POLR3BQ9NW08 1133 aaPredicted RBP13.23□□□□□ -0.29
VRK3-209ENST00000594948 PKD2L2Q9NZM6 624 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 GMPR2Q9P2T1 348 aaKnown RBP13.23□□□□□ -0.29
VRK3-209ENST00000594948 ANAPC2Q9UJX6 822 aa13.23□□□□□ -0.29
VRK3-209ENST00000594948 PLXNA3P51805 1871 aa13.22□□□□□ -0.29
VRK3-209ENST00000594948 ATP6AP2A0A1C7CYW4 349 aa13.22□□□□□ -0.29
VRK3-209ENST00000594948 A0A1W2PP18 115 aa13.22□□□□□ -0.29
VRK3-209ENST00000594948 HAS3O00219 553 aa13.22□□□□□ -0.29
VRK3-209ENST00000594948 GIPC1O14908 333 aa13.22□□□□□ -0.29
VRK3-209ENST00000594948 PIP5K1BO14986 540 aa13.22□□□□□ -0.29
VRK3-209ENST00000594948 ATP6AP2O75787 350 aa13.22□□□□□ -0.29
VRK3-209ENST00000594948 PEX11BO96011 259 aa13.22□□□□□ -0.29
VRK3-209ENST00000594948 NPPAP01160 153 aa13.22□□□□□ -0.29
VRK3-209ENST00000594948 INHBBP09529 407 aa13.22□□□□□ -0.29
VRK3-209ENST00000594948 RPL9P32969 192 aaKnown RBP13.22□□□□□ -0.29
VRK3-209ENST00000594948 KCNC1P48547 511 aa13.22□□□□□ -0.29
VRK3-209ENST00000594948 CD97P48960 835 aa13.22□□□□□ -0.29
VRK3-209ENST00000594948 ADARB1P78563 741 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms