RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 VPS52Q8N1B4 723 aa4.28□□□□□ -1.72
LINC00649-204ENST00000593977 FBXW8Q8N3Y1 598 aa4.28□□□□□ -1.72
LINC00649-204ENST00000593977 LILRA3Q8N6C8 439 aaPredicted RBP4.28□□□□□ -1.72
LINC00649-204ENST00000593977 RFWD2Q8NHY2 731 aa4.28□□□□□ -1.72
LINC00649-204ENST00000593977 PRCCQ92733 491 aaPredicted RBP4.28□□□□□ -1.72
LINC00649-204ENST00000593977 TEKT1Q969V4 418 aa4.28□□□□□ -1.72
LINC00649-204ENST00000593977 KIRREL1Q96J84 757 aa4.28□□□□□ -1.72
LINC00649-204ENST00000593977 RPGRIP1Q96KN7 1286 aa4.28□□□□□ -1.72
LINC00649-204ENST00000593977 FAM227BQ96M60 508 aa4.28□□□□□ -1.72
LINC00649-204ENST00000593977 GLT1D1Q96MS3 346 aa4.28□□□□□ -1.72
LINC00649-204ENST00000593977 NEK1Q96PY6 1258 aa4.28□□□□□ -1.72
LINC00649-204ENST00000593977 SH3GL2Q99962 352 aa4.28□□□□□ -1.72
LINC00649-204ENST00000593977 SRSF8Q9BRL6 282 aaKnown RBP4.28□□□□□ -1.72
LINC00649-204ENST00000593977 C17orf80Q9BSJ5 609 aa4.28□□□□□ -1.72
LINC00649-204ENST00000593977 MLPHQ9BV36 600 aaPredicted RBP4.28□□□□□ -1.72
LINC00649-204ENST00000593977 CCDC106Q9BWC9 280 aa4.28□□□□□ -1.72
LINC00649-204ENST00000593977 PACSIN1Q9BY11 444 aa4.28□□□□□ -1.72
LINC00649-204ENST00000593977 KRTAP4-9Q9BYQ8 210 aa4.28□□□□□ -1.72
LINC00649-204ENST00000593977 C11orf54Q9H0W9 315 aaPredicted RBP4.28□□□□□ -1.72
LINC00649-204ENST00000593977 TM9SF3Q9HD45 589 aa4.28□□□□□ -1.72
LINC00649-204ENST00000593977 POLE3Q9NRF9 147 aa4.28□□□□□ -1.72
LINC00649-204ENST00000593977 SLC35D1Q9NTN3 355 aa4.28□□□□□ -1.72
LINC00649-204ENST00000593977 LIN7CQ9NUP9 197 aaKnown RBP4.28□□□□□ -1.72
LINC00649-204ENST00000593977 ABCB8Q9NUT2 735 aa4.28□□□□□ -1.72
LINC00649-204ENST00000593977 FBXO34Q9NWN3 711 aa4.28□□□□□ -1.72
LINC00649-204ENST00000593977 CNIH4Q9P003 139 aa4.28□□□□□ -1.72
LINC00649-204ENST00000593977 HCN3Q9P1Z3 774 aa4.28□□□□□ -1.72
LINC00649-204ENST00000593977 CFAP97Q9P2B7 532 aa4.28□□□□□ -1.72
LINC00649-204ENST00000593977 SUN2Q9UH99 717 aa4.28□□□□□ -1.72
LINC00649-204ENST00000593977 TSPYL4Q9UJ04 414 aa4.28□□□□□ -1.72
LINC00649-204ENST00000593977 OSGIN1Q9UJX0 560 aa4.28□□□□□ -1.72
LINC00649-204ENST00000593977 INTS6Q9UL03 887 aaKnown RBP4.28□□□□□ -1.72
LINC00649-204ENST00000593977 SLC45A2Q9UMX9 530 aa4.28□□□□□ -1.72
LINC00649-204ENST00000593977 PPIEQ9UNP9 301 aaKnown RBP4.28□□□□□ -1.72
LINC00649-204ENST00000593977 TMED5Q9Y3A6 229 aa4.28□□□□□ -1.72
LINC00649-204ENST00000593977 NFS1Q9Y697 457 aa4.28□□□□□ -1.72
LINC00649-204ENST00000593977 CLCA3PQ9Y6N3 262 aa4.28□□□□□ -1.72
LINC00649-204ENST00000593977 RELNP78509 3460 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 NAV3Q8IVL0 2385 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 ADAMTS20P59510 1910 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 GOLGA6L10A0A0M3HER8 536 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 A0A1W2PQF6 199 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 MYADML2A6NDP7 307 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 AQP7P3A6NL99 342 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 ENO4A6NNW6 628 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 ZNF785A8K8V0 405 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 GPR89AB7ZAQ6 455 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 TEX22C9J3V5 150 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 KIF1CO43896 1103 aaKnown RBP4.27□□□□□ -1.73
LINC00649-204ENST00000593977 SLCO2B1O94956 709 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 LARGE1O95461 756 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 DDAH2O95865 285 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 ONECUT2O95948 504 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 KNG1P01042 644 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 PENKP01210 267 aaPredicted RBP4.27□□□□□ -1.73
LINC00649-204ENST00000593977 ALPPP05187 535 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 ASGR1P07306 291 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 GPR89BP0CG08 455 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 SP9P0CG40 484 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 ALPPL2P10696 532 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 HSPA5P11021 654 aaKnown RBP4.27□□□□□ -1.73
LINC00649-204ENST00000593977 ACTN1P12814 892 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 ACP5P13686 325 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 COX7A2P14406 83 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 GYPEP15421 78 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 CHN1P15882 459 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 TAL1P17542 331 aaPredicted RBP4.27□□□□□ -1.73
LINC00649-204ENST00000593977 AGAP20933 346 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 MC5RP33032 325 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 MTIF2P46199 727 aaKnown RBP4.27□□□□□ -1.73
LINC00649-204ENST00000593977 KCNJ4P48050 445 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 BMXP51813 675 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 MFAP4P55083 255 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 EIF3BP55884 814 aaKnown RBP4.27□□□□□ -1.73
LINC00649-204ENST00000593977 TRA2BP62995 288 aaKnown RBP4.27□□□□□ -1.73
LINC00649-204ENST00000593977 CUL2Q13617 745 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 FHL3Q13643 280 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 IL11RAQ14626 422 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 INAQ16352 499 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 INSCQ1MX18 579 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 ZNF792Q3KQV3 632 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 PHF19Q5T6S3 580 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 CES4AQ5XG92 561 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 TPGS2Q68CL5 300 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 CDC73Q6P1J9 531 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 SARM1Q6SZW1 724 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 CLEC17AQ6ZS10 378 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 SEM1Q6ZVN7 128 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 ERN2Q76MJ5 926 aaKnown RBP4.27□□□□□ -1.73
LINC00649-204ENST00000593977 DEFB128Q7Z7B8 93 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 FAM160B2Q86V87 743 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 FAM185AQ8N0U4 392 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 SMRP1Q8NCR6 262 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 FAM46DQ8NEK8 389 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 NEK11Q8NG66 645 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 KIAA1524Q8TCG1 905 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 SLC5A11Q8WWX8 675 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 ANP32BQ92688 251 aaKnown RBP4.27□□□□□ -1.73
LINC00649-204ENST00000593977 KLHL29Q96CT2 875 aa4.27□□□□□ -1.73
LINC00649-204ENST00000593977 TUBGCP3Q96CW5 907 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms