RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 C9orf172C9J069 976 aa14.74□□□□□ -0.05
PNKP-202ENST00000593706 PRPSAP2O60256 369 aa14.74□□□□□ -0.05
PNKP-202ENST00000593706 LRCH4O75427 683 aa14.74□□□□□ -0.05
PNKP-202ENST00000593706 RNF8O76064 485 aa14.74□□□□□ -0.05
PNKP-202ENST00000593706 CPP00450 1065 aa14.74□□□□□ -0.05
PNKP-202ENST00000593706 SERPING1P05155 500 aa14.74□□□□□ -0.05
PNKP-202ENST00000593706 HOXC4P09017 264 aaPredicted RBP14.74□□□□□ -0.05
PNKP-202ENST00000593706 FAM228BP0C875 321 aa14.74□□□□□ -0.05
PNKP-202ENST00000593706 CCNB1P14635 433 aa14.74□□□□□ -0.05
PNKP-202ENST00000593706 GM2AP17900 193 aa14.74□□□□□ -0.05
PNKP-202ENST00000593706 ERCC2P18074 760 aa14.74□□□□□ -0.05
PNKP-202ENST00000593706 NFKBIAP25963 317 aa14.74□□□□□ -0.05
PNKP-202ENST00000593706 ALDH4A1P30038 563 aa14.74□□□□□ -0.05
PNKP-202ENST00000593706 TRIM23P36406 574 aa14.74□□□□□ -0.05
PNKP-202ENST00000593706 GNPDA1P46926 289 aa14.74□□□□□ -0.05
PNKP-202ENST00000593706 RENBPP51606 427 aa14.74□□□□□ -0.05
PNKP-202ENST00000593706 NFKB2Q00653 900 aa14.74□□□□□ -0.05
PNKP-202ENST00000593706 IL10RBQ08334 325 aa14.74□□□□□ -0.05
PNKP-202ENST00000593706 NSUN2Q08J23 767 aaKnown RBP eCLIP14.74□□□□□ -0.05
PNKP-202ENST00000593706 LBRQ14739 615 aaKnown RBP14.74□□□□□ -0.05
PNKP-202ENST00000593706 C16orf72Q14CZ0 275 aa14.74□□□□□ -0.05
PNKP-202ENST00000593706 TMCO4Q5TGY1 634 aa14.74□□□□□ -0.05
PNKP-202ENST00000593706 AFMIDQ63HM1 303 aa14.74□□□□□ -0.05
PNKP-202ENST00000593706 ARHGAP12Q8IWW6 846 aa14.74□□□□□ -0.05
PNKP-202ENST00000593706 PELI3Q8N2H9 469 aa14.74□□□□□ -0.05
PNKP-202ENST00000593706 NPWQ8N729 165 aa14.74□□□□□ -0.05
PNKP-202ENST00000593706 ZDHHC1Q8WTX9 485 aa14.74□□□□□ -0.05
PNKP-202ENST00000593706 TRIM11Q96F44 468 aa14.74□□□□□ -0.05
PNKP-202ENST00000593706 KCTD15Q96SI1 283 aaPredicted RBP14.74□□□□□ -0.05
PNKP-202ENST00000593706 SEPT3Q9UH03 358 aa14.74□□□□□ -0.05
PNKP-202ENST00000593706 SCINQ9Y6U3 715 aa14.74□□□□□ -0.05
PNKP-202ENST00000593706 LRRK2Q5S007 2527 aa14.73□□□□□ -0.05
PNKP-202ENST00000593706 NBASA2RRP1 2371 aa14.73□□□□□ -0.05
PNKP-202ENST00000593706 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.73□□□□□ -0.05
PNKP-202ENST00000593706 STMND1H3BQB6 276 aa14.73□□□□□ -0.05
PNKP-202ENST00000593706 TRAFD1O14545 582 aaPredicted RBP14.73□□□□□ -0.05
PNKP-202ENST00000593706 ARHGAP6O43182 974 aa14.73□□□□□ -0.05
PNKP-202ENST00000593706 SFTPCP11686 197 aa14.73□□□□□ -0.05
PNKP-202ENST00000593706 MIPP30301 263 aa14.73□□□□□ -0.05
PNKP-202ENST00000593706 CASP14P31944 242 aa14.73□□□□□ -0.05
PNKP-202ENST00000593706 CSRP3P50461 194 aa14.73□□□□□ -0.05
PNKP-202ENST00000593706 OR1D5P58170 312 aa14.73□□□□□ -0.05
PNKP-202ENST00000593706 CYP4F2P78329 520 aa14.73□□□□□ -0.05
PNKP-202ENST00000593706 CNGA3Q16281 694 aa14.73□□□□□ -0.05
PNKP-202ENST00000593706 TDRD12Q587J7 1177 aaKnown RBP14.73□□□□□ -0.05
PNKP-202ENST00000593706 SLC30A9Q6PML9 568 aa14.73□□□□□ -0.05
PNKP-202ENST00000593706 RCBTB1Q8NDN9 531 aa14.73□□□□□ -0.05
PNKP-202ENST00000593706 GPBAR1Q8TDU6 330 aa14.73□□□□□ -0.05
PNKP-202ENST00000593706 JPH3Q8WXH2 748 aaPredicted RBP14.73□□□□□ -0.05
PNKP-202ENST00000593706 PSKH2Q96QS6 385 aa14.73□□□□□ -0.05
PNKP-202ENST00000593706 DNAJC7Q99615 494 aa14.73□□□□□ -0.05
PNKP-202ENST00000593706 NUDT22Q9BRQ3 303 aa14.73□□□□□ -0.05
PNKP-202ENST00000593706 STARD5Q9NSY2 213 aa14.73□□□□□ -0.05
PNKP-202ENST00000593706 SPATS2LQ9NUQ6 558 aaKnown RBP14.73□□□□□ -0.05
PNKP-202ENST00000593706 TAAR2Q9P1P5 351 aa14.73□□□□□ -0.05
PNKP-202ENST00000593706 LUC7L2Q9Y383 392 aaKnown RBP14.73□□□□□ -0.05
PNKP-202ENST00000593706 RELNP78509 3460 aa14.72□□□□□ -0.05
PNKP-202ENST00000593706 SOCS5O75159 536 aa14.72□□□□□ -0.05
PNKP-202ENST00000593706 ECEL1O95672 775 aa14.72□□□□□ -0.05
PNKP-202ENST00000593706 CYP1A2P05177 515 aa14.72□□□□□ -0.05
PNKP-202ENST00000593706 TCF4P15884 667 aa14.72□□□□□ -0.05
PNKP-202ENST00000593706 IL1R2P27930 398 aa14.72□□□□□ -0.05
PNKP-202ENST00000593706 VIPR1P32241 457 aa14.72□□□□□ -0.05
PNKP-202ENST00000593706 PPM1FP49593 454 aaPredicted RBP14.72□□□□□ -0.05
PNKP-202ENST00000593706 ATP1A2P50993 1020 aa14.72□□□□□ -0.05
PNKP-202ENST00000593706 B4GALNT1Q00973 533 aa14.72□□□□□ -0.05
PNKP-202ENST00000593706 SLC10A7Q0GE19 358 aa14.72□□□□□ -0.05
PNKP-202ENST00000593706 RAET1GQ6H3X3 334 aa14.72□□□□□ -0.05
PNKP-202ENST00000593706 ATG14Q6ZNE5 492 aa14.72□□□□□ -0.05
PNKP-202ENST00000593706 PSTKQ8IV42 348 aaKnown RBP14.72□□□□□ -0.05
PNKP-202ENST00000593706 BBS5Q8N3I7 341 aa14.72□□□□□ -0.05
PNKP-202ENST00000593706 CCDC112Q8NEF3 446 aa14.72□□□□□ -0.05
PNKP-202ENST00000593706 CPLX3Q8WVH0 158 aa14.72□□□□□ -0.05
PNKP-202ENST00000593706 CCDC74BQ96LY2 380 aa14.72□□□□□ -0.05
PNKP-202ENST00000593706 COQ10AQ96MF6 247 aa14.72□□□□□ -0.05
PNKP-202ENST00000593706 THAP2Q9H0W7 228 aa14.72□□□□□ -0.05
PNKP-202ENST00000593706 CDH19Q9H159 772 aa14.72□□□□□ -0.05
PNKP-202ENST00000593706 TSPY26PQ9H489 355 aa14.72□□□□□ -0.05
PNKP-202ENST00000593706 ZWILCHQ9H900 591 aa14.72□□□□□ -0.05
PNKP-202ENST00000593706 KCTD5Q9NXV2 234 aa14.72□□□□□ -0.05
PNKP-202ENST00000593706 SUFUQ9UMX1 484 aa14.72□□□□□ -0.05
PNKP-202ENST00000593706 SPENQ96T58 3664 aaKnown RBP14.71□□□□□ -0.05
PNKP-202ENST00000593706 A0A1W2PQ67 120 aa14.71□□□□□ -0.05
PNKP-202ENST00000593706 TTC24A2A3L6 582 aaPredicted RBP14.71□□□□□ -0.05
PNKP-202ENST00000593706 HGSO14964 777 aaPredicted RBP14.71□□□□□ -0.05
PNKP-202ENST00000593706 B4GAT1O43505 415 aa14.71□□□□□ -0.05
PNKP-202ENST00000593706 PPFIA2O75334 1257 aa14.71□□□□□ -0.05
PNKP-202ENST00000593706 HEXIM1O94992 359 aaKnown RBP14.71□□□□□ -0.05
PNKP-202ENST00000593706 FGF1P05230 155 aa14.71□□□□□ -0.05
PNKP-202ENST00000593706 CYP2A6P11509 494 aaPredicted RBP14.71□□□□□ -0.05
PNKP-202ENST00000593706 CCL4P13236 92 aa14.71□□□□□ -0.05
PNKP-202ENST00000593706 AK4P27144 223 aaPredicted RBP14.71□□□□□ -0.05
PNKP-202ENST00000593706 PCK1P35558 622 aa14.71□□□□□ -0.05
PNKP-202ENST00000593706 HSPA9P38646 679 aaKnown RBP14.71□□□□□ -0.05
PNKP-202ENST00000593706 ETV3P41162 512 aa14.71□□□□□ -0.05
PNKP-202ENST00000593706 CDK3Q00526 305 aa14.71□□□□□ -0.05
PNKP-202ENST00000593706 PEX6Q13608 980 aa14.71□□□□□ -0.05
PNKP-202ENST00000593706 TBR1Q16650 682 aa14.71□□□□□ -0.05
PNKP-202ENST00000593706 ASTE1Q2TB18 679 aaPredicted RBP14.71□□□□□ -0.05
PNKP-202ENST00000593706 DOK6Q6PKX4 331 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms