RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 TRNAU1APQ9NX07 287 aaKnown RBP16.34■□□□□ 0.21
LIG1-205ENST00000593425 PCDHB11Q9Y5F2 797 aa16.34■□□□□ 0.21
LIG1-205ENST00000593425 HEMK1Q9Y5R4 338 aaPredicted RBP16.34■□□□□ 0.21
LIG1-205ENST00000593425 MYO18BQ8IUG5 2567 aa16.33■□□□□ 0.21
LIG1-205ENST00000593425 BSNQ9UPA5 3926 aa16.33■□□□□ 0.21
LIG1-205ENST00000593425 AHCTF1Q8WYP5 2266 aa16.33■□□□□ 0.2
LIG1-205ENST00000593425 IGHV5-10-1A0A0J9YXX1 117 aa16.33■□□□□ 0.2
LIG1-205ENST00000593425 GOLGA6CA6NDK9 693 aa16.33■□□□□ 0.2
LIG1-205ENST00000593425 GOLGA6BA6NDN3 693 aa16.33■□□□□ 0.2
LIG1-205ENST00000593425 NPIPB15A6NHN6 443 aaPredicted RBP16.33■□□□□ 0.2
LIG1-205ENST00000593425 LRRC53A6NM62 1247 aa16.33■□□□□ 0.2
LIG1-205ENST00000593425 RHPN2P1A8MT19 583 aa16.33■□□□□ 0.2
LIG1-205ENST00000593425 GOLGA6DP0CG33 693 aa16.33■□□□□ 0.2
LIG1-205ENST00000593425 TCF4P15884 667 aa16.33■□□□□ 0.2
LIG1-205ENST00000593425 CD82P27701 267 aa16.33■□□□□ 0.2
LIG1-205ENST00000593425 IL1R2P27930 398 aa16.33■□□□□ 0.2
LIG1-205ENST00000593425 CD1CP29017 333 aa16.33■□□□□ 0.2
LIG1-205ENST00000593425 MAXP61244 160 aa16.33■□□□□ 0.2
LIG1-205ENST00000593425 STX1AQ16623 288 aa16.33■□□□□ 0.2
LIG1-205ENST00000593425 TBR1Q16650 682 aa16.33■□□□□ 0.2
LIG1-205ENST00000593425 SMTNL2Q2TAL5 461 aa16.33■□□□□ 0.2
LIG1-205ENST00000593425 E4F1Q66K89 784 aaPredicted RBP16.33■□□□□ 0.2
LIG1-205ENST00000593425 RAET1GQ6H3X3 334 aa16.33■□□□□ 0.2
LIG1-205ENST00000593425 PPP1R2P3Q6NXS1 205 aa16.33■□□□□ 0.2
LIG1-205ENST00000593425 SASS6Q6UVJ0 657 aa16.33■□□□□ 0.2
LIG1-205ENST00000593425 XKR5Q6UX68 686 aa16.33■□□□□ 0.2
LIG1-205ENST00000593425 CLEC17AQ6ZS10 378 aa16.33■□□□□ 0.2
LIG1-205ENST00000593425 Q6ZVL8 140 aa16.33■□□□□ 0.2
LIG1-205ENST00000593425 TSPAN33Q86UF1 283 aa16.33■□□□□ 0.2
LIG1-205ENST00000593425 PSTKQ8IV42 348 aaKnown RBP16.33■□□□□ 0.2
LIG1-205ENST00000593425 LZTR1Q8N653 840 aa16.33■□□□□ 0.2
LIG1-205ENST00000593425 MGME1Q9BQP7 344 aa16.33■□□□□ 0.2
LIG1-205ENST00000593425 GOLGA6AQ9NYA3 693 aa16.33■□□□□ 0.2
LIG1-205ENST00000593425 CNOT8Q9UFF9 292 aaKnown RBP16.33■□□□□ 0.2
LIG1-205ENST00000593425 PLEKHM1Q9Y4G2 1056 aa16.33■□□□□ 0.2
LIG1-205ENST00000593425 A0A0U1RQS6 177 aa16.32■□□□□ 0.2
LIG1-205ENST00000593425 A0A1W2PQ67 120 aa16.32■□□□□ 0.2
LIG1-205ENST00000593425 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.32■□□□□ 0.2
LIG1-205ENST00000593425 TERTO14746 1132 aaKnown RBP16.32■□□□□ 0.2
LIG1-205ENST00000593425 ZFC3H1O60293 1989 aaKnown RBP16.32■□□□□ 0.2
LIG1-205ENST00000593425 FGF3P11487 239 aaPredicted RBP16.32■□□□□ 0.2
LIG1-205ENST00000593425 CYP2A6P11509 494 aaPredicted RBP16.32■□□□□ 0.2
LIG1-205ENST00000593425 AMPD1P23109 780 aa16.32■□□□□ 0.2
LIG1-205ENST00000593425 CSF2RBP32927 897 aa16.32■□□□□ 0.2
LIG1-205ENST00000593425 ZNF135P52742 658 aaPredicted RBP16.32■□□□□ 0.2
LIG1-205ENST00000593425 CTBSQ01459 385 aa16.32■□□□□ 0.2
LIG1-205ENST00000593425 DPYSL2Q16555 572 aa16.32■□□□□ 0.2
LIG1-205ENST00000593425 NKAIN2Q5VXU1 208 aa16.32■□□□□ 0.2
LIG1-205ENST00000593425 RFLNAQ6ZTI6 216 aa16.32■□□□□ 0.2
LIG1-205ENST00000593425 ZNF571Q7Z3V5 609 aaPredicted RBP16.32■□□□□ 0.2
LIG1-205ENST00000593425 ZNF653Q96CK0 615 aa16.32■□□□□ 0.2
LIG1-205ENST00000593425 FUCA2Q9BTY2 467 aa16.32■□□□□ 0.2
LIG1-205ENST00000593425 B3GNT4Q9C0J1 378 aa16.32■□□□□ 0.2
LIG1-205ENST00000593425 HAUS4Q9H6D7 363 aa16.32■□□□□ 0.2
LIG1-205ENST00000593425 ZWILCHQ9H900 591 aa16.32■□□□□ 0.2
LIG1-205ENST00000593425 AKAP7Q9P0M2 348 aaPredicted RBP16.32■□□□□ 0.2
LIG1-205ENST00000593425 MYO6Q9UM54 1294 aa16.32■□□□□ 0.2
LIG1-205ENST00000593425 PHTF1Q9UMS5 762 aa16.32■□□□□ 0.2
LIG1-205ENST00000593425 SLC17A4Q9Y2C5 497 aa16.32■□□□□ 0.2
LIG1-205ENST00000593425 PIEZO2Q9H5I5 2752 aa16.31■□□□□ 0.2
LIG1-205ENST00000593425 H3BRJ5 948 aa16.31■□□□□ 0.2
LIG1-205ENST00000593425 PSMD11O00231 422 aa16.31■□□□□ 0.2
LIG1-205ENST00000593425 HGSO14964 777 aaPredicted RBP16.31■□□□□ 0.2
LIG1-205ENST00000593425 PPM1DO15297 605 aa16.31■□□□□ 0.2
LIG1-205ENST00000593425 MAFKO60675 156 aa16.31■□□□□ 0.2
LIG1-205ENST00000593425 PGLSO95336 258 aa16.31■□□□□ 0.2
LIG1-205ENST00000593425 SOD1P00441 154 aa16.31■□□□□ 0.2
LIG1-205ENST00000593425 FTLP02792 175 aaPredicted RBP16.31■□□□□ 0.2
LIG1-205ENST00000593425 CTPS1P17812 591 aa16.31■□□□□ 0.2
LIG1-205ENST00000593425 HSPA9P38646 679 aaKnown RBP16.31■□□□□ 0.2
LIG1-205ENST00000593425 ADCY8P40145 1251 aa16.31■□□□□ 0.2
LIG1-205ENST00000593425 CSRP3P50461 194 aa16.31■□□□□ 0.2
LIG1-205ENST00000593425 LIMK2P53671 638 aa16.31■□□□□ 0.2
LIG1-205ENST00000593425 CLCA4Q14CN2 919 aa16.31■□□□□ 0.2
LIG1-205ENST00000593425 ASIC2Q16515 512 aa16.31■□□□□ 0.2
LIG1-205ENST00000593425 CLPPQ16740 277 aaPredicted RBP16.31■□□□□ 0.2
LIG1-205ENST00000593425 TMEM164Q5U3C3 297 aa16.31■□□□□ 0.2
LIG1-205ENST00000593425 DOK6Q6PKX4 331 aa16.31■□□□□ 0.2
LIG1-205ENST00000593425 TMCO3Q6UWJ1 677 aa16.31■□□□□ 0.2
LIG1-205ENST00000593425 AOPEPQ8N6M6 819 aa16.31■□□□□ 0.2
LIG1-205ENST00000593425 ZSCAN1Q8NBB4 408 aa16.31■□□□□ 0.2
LIG1-205ENST00000593425 SMIM14Q96QK8 99 aa16.31■□□□□ 0.2
LIG1-205ENST00000593425 MCCC1Q96RQ3 725 aaPredicted RBP16.31■□□□□ 0.2
LIG1-205ENST00000593425 KCTD5Q9NXV2 234 aa16.31■□□□□ 0.2
LIG1-205ENST00000593425 TMEM9Q9P0T7 183 aa16.31■□□□□ 0.2
LIG1-205ENST00000593425 MYO1AQ9UBC5 1043 aa16.31■□□□□ 0.2
LIG1-205ENST00000593425 CD84Q9UIB8 345 aa16.31■□□□□ 0.2
LIG1-205ENST00000593425 IGHV1OR21-1A0A087WYE8 117 aa16.3■□□□□ 0.2
LIG1-205ENST00000593425 STMND1H3BQB6 276 aa16.3■□□□□ 0.2
LIG1-205ENST00000593425 DDX3XO00571 662 aaKnown RBP eCLIP16.3■□□□□ 0.2
LIG1-205ENST00000593425 ARHGAP6O43182 974 aa16.3■□□□□ 0.2
LIG1-205ENST00000593425 IVLP07476 585 aa16.3■□□□□ 0.2
LIG1-205ENST00000593425 THRAP10827 490 aa16.3■□□□□ 0.2
LIG1-205ENST00000593425 GZMAP12544 262 aa16.3■□□□□ 0.2
LIG1-205ENST00000593425 MPSTP25325 297 aa16.3■□□□□ 0.2
LIG1-205ENST00000593425 TEAD1P28347 426 aa16.3■□□□□ 0.2
LIG1-205ENST00000593425 ARL4AP40617 200 aa16.3■□□□□ 0.2
LIG1-205ENST00000593425 ACTR1BP42025 376 aa16.3■□□□□ 0.2
LIG1-205ENST00000593425 GPR3P46089 330 aa16.3■□□□□ 0.2
LIG1-205ENST00000593425 ACTR1AP61163 376 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms