RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 RGSL1A5PLK6 1076 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 GFRA2O00451 464 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 GREM1O60565 184 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 PDHA1P08559 390 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 CNPP09543 421 aaKnown RBP19.67■□□□□ 0.74
CLIP3-206ENST00000593074 CTSAP10619 480 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 HDCP19113 662 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 IMPDH1P20839 514 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 PMLP29590 882 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 VHLP40337 213 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 KCNC1P48547 511 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 PLK1P53350 603 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 HERC3Q15034 1050 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 CMPK2Q5EBM0 449 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 DEFB107AQ8IZN7 70 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 ARL14EPQ8N8R7 260 aaPredicted RBP19.67■□□□□ 0.74
CLIP3-206ENST00000593074 SHKBP1Q8TBC3 707 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 ADAMTS19Q8TE59 1207 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 PHF21BQ96EK2 531 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 SLC22A12Q96S37 553 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 ZBP1Q9H171 429 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 IL23AQ9NPF7 189 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 C2orf81A6NN90 581 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 ZBBXA8MT70 800 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 OLFM2O95897 454 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 CDC25CP30307 473 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 SESN3P58005 492 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 TAF11Q15544 211 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 TMEM198Q66K66 360 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 TXNDC8Q6A555 127 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 CUZD1Q86UP6 607 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 FIBCD1Q8N539 461 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 LPCAT1Q8NF37 534 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 RP9Q8TA86 221 aaKnown RBP19.67■□□□□ 0.74
CLIP3-206ENST00000593074 DTX3LQ8TDB6 740 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 NRG4Q8WWG1 115 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 LPGAT1Q92604 370 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 TCF12Q99081 682 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 ADGRE3Q9BY15 652 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 ZBTB26Q9HCK0 441 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 PCDH10Q9P2E7 1040 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 PCDHGC4Q9Y5F7 938 aa19.67■□□□□ 0.74
CLIP3-206ENST00000593074 TGM5O43548 720 aa19.66■□□□□ 0.74
CLIP3-206ENST00000593074 SNAP91O60641 907 aa19.66■□□□□ 0.74
CLIP3-206ENST00000593074 TBL1XO60907 577 aa19.66■□□□□ 0.74
CLIP3-206ENST00000593074 PRSS56P0CW18 603 aa19.66■□□□□ 0.74
CLIP3-206ENST00000593074 INO80DQ53TQ3 878 aaPredicted RBP19.66■□□□□ 0.74
CLIP3-206ENST00000593074 ZNF678Q5SXM1 525 aa19.66■□□□□ 0.74
CLIP3-206ENST00000593074 NXNQ6DKJ4 435 aa19.66■□□□□ 0.74
CLIP3-206ENST00000593074 Q6ZNB5 142 aa19.66■□□□□ 0.74
CLIP3-206ENST00000593074 SNX32Q86XE0 403 aa19.66■□□□□ 0.74
CLIP3-206ENST00000593074 KIRREL3Q8IZU9 778 aa19.66■□□□□ 0.74
CLIP3-206ENST00000593074 PELI3Q8N2H9 469 aa19.66■□□□□ 0.74
CLIP3-206ENST00000593074 AFAP1L2Q8N4X5 818 aa19.66■□□□□ 0.74
CLIP3-206ENST00000593074 HJURPQ8NCD3 748 aaPredicted RBP19.66■□□□□ 0.74
CLIP3-206ENST00000593074 RHEBL1Q8TAI7 183 aa19.66■□□□□ 0.74
CLIP3-206ENST00000593074 CATSPER2Q96P56 530 aa19.66■□□□□ 0.74
CLIP3-206ENST00000593074 MEAF6Q9HAF1 191 aa19.66■□□□□ 0.74
CLIP3-206ENST00000593074 TNFRSF12AQ9NP84 129 aa19.66■□□□□ 0.74
CLIP3-206ENST00000593074 LHX3Q9UBR4 397 aa19.66■□□□□ 0.74
CLIP3-206ENST00000593074 KIAA1671Q9BY89 1806 aa19.66■□□□□ 0.74
CLIP3-206ENST00000593074 VGLL3A8MV65 326 aa19.66■□□□□ 0.74
CLIP3-206ENST00000593074 TBL3Q12788 808 aaKnown RBP19.66■□□□□ 0.74
CLIP3-206ENST00000593074 TRAF2Q12933 501 aa19.66■□□□□ 0.74
CLIP3-206ENST00000593074 NCEH1Q6PIU2 408 aa19.66■□□□□ 0.74
CLIP3-206ENST00000593074 LINGO4Q6UY18 593 aa19.66■□□□□ 0.74
CLIP3-206ENST00000593074 LRRC74BQ6ZQY2 392 aa19.66■□□□□ 0.74
CLIP3-206ENST00000593074 CEP70Q8NHQ1 597 aa19.66■□□□□ 0.74
CLIP3-206ENST00000593074 ZBED2Q9BTP6 218 aa19.66■□□□□ 0.74
CLIP3-206ENST00000593074 NMRK1Q9NWW6 199 aa19.66■□□□□ 0.74
CLIP3-206ENST00000593074 OR51B4Q9Y5P0 310 aa19.66■□□□□ 0.74
CLIP3-206ENST00000593074 ANKRD66B4E2M5 251 aa19.65■□□□□ 0.74
CLIP3-206ENST00000593074 H0Y626 953 aa19.65■□□□□ 0.74
CLIP3-206ENST00000593074 LUC7L3O95232 432 aaKnown RBP19.65■□□□□ 0.74
CLIP3-206ENST00000593074 CXCL14O95715 111 aa19.65■□□□□ 0.74
CLIP3-206ENST00000593074 CD1EP15812 388 aa19.65■□□□□ 0.74
CLIP3-206ENST00000593074 LPOP22079 712 aaPredicted RBP19.65■□□□□ 0.74
CLIP3-206ENST00000593074 GABRR2P28476 465 aa19.65■□□□□ 0.74
CLIP3-206ENST00000593074 MZF1P28698 734 aaPredicted RBP19.65■□□□□ 0.74
CLIP3-206ENST00000593074 INHBCP55103 352 aa19.65■□□□□ 0.74
CLIP3-206ENST00000593074 HERVK_113P63132 956 aa19.65■□□□□ 0.74
CLIP3-206ENST00000593074 PDAP1Q13442 181 aaKnown RBP19.65■□□□□ 0.74
CLIP3-206ENST00000593074 PPM1LQ5SGD2 360 aa19.65■□□□□ 0.74
CLIP3-206ENST00000593074 RPS27LQ71UM5 84 aaKnown RBP19.65■□□□□ 0.74
CLIP3-206ENST00000593074 FAM217AQ8IXS0 508 aa19.65■□□□□ 0.74
CLIP3-206ENST00000593074 CARNMT1Q8N4J0 409 aa19.65■□□□□ 0.74
CLIP3-206ENST00000593074 GIMAP7Q8NHV1 300 aa19.65■□□□□ 0.74
CLIP3-206ENST00000593074 TMA16Q96EY4 203 aaKnown RBP19.65■□□□□ 0.74
CLIP3-206ENST00000593074 NAF1Q96HR8 494 aaKnown RBP19.65■□□□□ 0.74
CLIP3-206ENST00000593074 FEM1AQ9BSK4 669 aa19.65■□□□□ 0.74
CLIP3-206ENST00000593074 ERVK-6Q9BXR3 956 aa19.65■□□□□ 0.74
CLIP3-206ENST00000593074 ANGPTL2Q9UKU9 493 aa19.65■□□□□ 0.74
CLIP3-206ENST00000593074 MED16Q9Y2X0 877 aa19.65■□□□□ 0.74
CLIP3-206ENST00000593074 CPQQ9Y646 472 aa19.65■□□□□ 0.74
CLIP3-206ENST00000593074 COPG1Q9Y678 874 aaKnown RBP19.65■□□□□ 0.74
CLIP3-206ENST00000593074 WASF2Q9Y6W5 498 aa19.65■□□□□ 0.74
CLIP3-206ENST00000593074 GBF1Q92538 1859 aa19.65■□□□□ 0.74
CLIP3-206ENST00000593074 SMIM24O75264 130 aa19.64■□□□□ 0.74
CLIP3-206ENST00000593074 PDE5AO76074 875 aa19.64■□□□□ 0.74
CLIP3-206ENST00000593074 LRG1P02750 347 aa19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms