RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 FOXM1Q08050 763 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 C16orf72Q14CZ0 275 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 VPS26BQ4G0F5 336 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 AFMIDQ63HM1 303 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 BEND5Q7L4P6 421 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 KDELC2Q7Z4H8 507 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 PATL1Q86TB9 770 aaKnown RBP14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 MIER2Q8N344 545 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 TERB1Q8NA31 727 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 OR13J1Q8NGT2 312 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 RPF2Q9H7B2 306 aaKnown RBP14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 SPON1Q9HCB6 807 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 GID8Q9NWU2 228 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 ATE1O95260 518 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 FCGR1AP12314 374 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 GPR158Q5T848 1215 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 DNAJB3Q8WWF6 145 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 YTHDF1Q9BYJ9 559 aaKnown RBP14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 MUC13Q9H3R2 512 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 IL1RL2Q9HB29 575 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 SLC52A3Q9NQ40 469 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 OSER1Q9NX31 292 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 EGFL7Q9UHF1 273 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 OAZ3Q9UMX2 235 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 RABL2BQ9UNT1 228 aa14.86□□□□□ -0.03
SMARCA4-219ENST00000592604 ANGPT2O15123 496 aa14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 SLC7A4O43246 635 aa14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 CLASP2O75122 1294 aaKnown RBP14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 CDK14O94921 469 aa14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 S1PR4O95977 384 aa14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 SERPINH1P50454 418 aaKnown RBP14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 CDKN2DP55273 166 aa14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 PMS2P3Q13401 168 aa14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 BRMS1LQ5PSV4 323 aa14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 ABRAXAS1Q6UWZ7 409 aa14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 ZNF354CQ86Y25 554 aa14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 LRRC49Q8IUZ0 686 aa14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 IQCF2Q8IXL9 164 aa14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 LRRC58Q96CX6 371 aa14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 SLC25A51Q9H1U9 297 aa14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 SDR39U1Q9NRG7 319 aaPredicted RBP14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 NDFIP2Q9NV92 336 aa14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 PCDHA9Q9Y5H5 950 aa14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 ZFC3H1O60293 1989 aaKnown RBP14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 H3BMQ9 156 aa14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 ARPC2O15144 300 aa14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 NAT2P11245 290 aa14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 GFAPP14136 432 aa14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 OXTRP30559 389 aa14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 NOMO2Q5JPE7 1267 aa14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 MOB2Q70IA6 237 aa14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 PAPD5Q8NDF8 572 aaKnown RBP14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 GPRC5AQ8NFJ5 357 aa14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 TSPEARQ8WU66 669 aa14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 HDAC10Q969S8 669 aa14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 DCPSQ96C86 337 aaKnown RBP14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 ZFP42Q96MM3 310 aa14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 COG8Q96MW5 612 aa14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 DCUN1D5Q9BTE7 237 aa14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 POLR3BQ9NW08 1133 aaPredicted RBP14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 TIMM13Q9Y5L4 95 aaPredicted RBP14.85□□□□□ -0.03
SMARCA4-219ENST00000592604 CLOCKO15516 846 aa14.84□□□□□ -0.03
SMARCA4-219ENST00000592604 IRAK2O43187 625 aa14.84□□□□□ -0.03
SMARCA4-219ENST00000592604 SNAP91O60641 907 aa14.84□□□□□ -0.03
SMARCA4-219ENST00000592604 PAGE1O75459 146 aa14.84□□□□□ -0.03
SMARCA4-219ENST00000592604 CDH13P55290 713 aa14.84□□□□□ -0.03
SMARCA4-219ENST00000592604 ADAM17P78536 824 aa14.84□□□□□ -0.03
SMARCA4-219ENST00000592604 ZNF829Q3KNS6 432 aaPredicted RBP14.84□□□□□ -0.03
SMARCA4-219ENST00000592604 PTRH1Q86Y79 214 aaKnown RBP14.84□□□□□ -0.03
SMARCA4-219ENST00000592604 SNRNP27Q8WVK2 155 aaKnown RBP14.84□□□□□ -0.03
SMARCA4-219ENST00000592604 PTERQ96BW5 349 aa14.84□□□□□ -0.03
SMARCA4-219ENST00000592604 CNDP2Q96KP4 475 aaKnown RBP14.84□□□□□ -0.03
SMARCA4-219ENST00000592604 MFSD1Q9H3U5 465 aa14.84□□□□□ -0.03
SMARCA4-219ENST00000592604 FADS3Q9Y5Q0 445 aa14.84□□□□□ -0.03
SMARCA4-219ENST00000592604 TNPO2O14787 897 aaKnown RBP14.84□□□□□ -0.03
SMARCA4-219ENST00000592604 AZIN1O14977 448 aa14.84□□□□□ -0.03
SMARCA4-219ENST00000592604 CAPGP40121 348 aa14.84□□□□□ -0.03
SMARCA4-219ENST00000592604 YBX1P67809 324 aaKnown RBP14.84□□□□□ -0.03
SMARCA4-219ENST00000592604 GRB7Q14451 532 aa14.84□□□□□ -0.03
SMARCA4-219ENST00000592604 RAB39AQ14964 217 aa14.84□□□□□ -0.03
SMARCA4-219ENST00000592604 KANK2Q63ZY3 851 aa14.84□□□□□ -0.03
SMARCA4-219ENST00000592604 BLOC1S3Q6QNY0 202 aa14.84□□□□□ -0.03
SMARCA4-219ENST00000592604 USP51Q70EK9 711 aa14.84□□□□□ -0.03
SMARCA4-219ENST00000592604 DHRSXQ8N5I4 330 aa14.84□□□□□ -0.03
SMARCA4-219ENST00000592604 PPP1R13LQ8WUF5 828 aa14.84□□□□□ -0.03
SMARCA4-219ENST00000592604 TWIST2Q8WVJ9 160 aa14.84□□□□□ -0.03
SMARCA4-219ENST00000592604 CACNG4Q9UBN1 327 aa14.84□□□□□ -0.03
SMARCA4-219ENST00000592604 TRIP12Q14669 1992 aaPredicted RBP14.84□□□□□ -0.03
SMARCA4-219ENST00000592604 TCRBV5S2A0A599 114 aa14.83□□□□□ -0.03
SMARCA4-219ENST00000592604 MROH6A6NGR9 719 aa14.83□□□□□ -0.03
SMARCA4-219ENST00000592604 GIPC1O14908 333 aa14.83□□□□□ -0.03
SMARCA4-219ENST00000592604 PIP5K1BO14986 540 aa14.83□□□□□ -0.03
SMARCA4-219ENST00000592604 SEC24DO94855 1032 aaPredicted RBP14.83□□□□□ -0.03
SMARCA4-219ENST00000592604 F2P00734 622 aa14.83□□□□□ -0.03
SMARCA4-219ENST00000592604 INHBBP09529 407 aa14.83□□□□□ -0.03
SMARCA4-219ENST00000592604 CD1DP15813 335 aa14.83□□□□□ -0.03
SMARCA4-219ENST00000592604 VARSP26640 1264 aaKnown RBP14.83□□□□□ -0.03
SMARCA4-219ENST00000592604 RFC2P35250 354 aa14.83□□□□□ -0.03
SMARCA4-219ENST00000592604 PCSK7Q16549 785 aa14.83□□□□□ -0.03
SMARCA4-219ENST00000592604 CYBRD1Q53TN4 286 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms