RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	AKAP7	Q9P0M2	348 aa	Predicted RBP	18.26	■□□□□ 0.51
CIRBP-238	ENST00000592412	PLEKHM1	Q9Y4G2	1056 aa		18.26	■□□□□ 0.51
CIRBP-238	ENST00000592412	PCDHGC4	Q9Y5F7	938 aa		18.26	■□□□□ 0.51
CIRBP-238	ENST00000592412	ANKRD62	A6NC57	917 aa		18.25	■□□□□ 0.51
CIRBP-238	ENST00000592412	DFFA	O00273	331 aa		18.25	■□□□□ 0.51
CIRBP-238	ENST00000592412	PDE2A	O00408	941 aa	Predicted RBP	18.25	■□□□□ 0.51
CIRBP-238	ENST00000592412	CR2	P20023	1033 aa		18.25	■□□□□ 0.51
CIRBP-238	ENST00000592412	GPR3	P46089	330 aa		18.25	■□□□□ 0.51
CIRBP-238	ENST00000592412	POLE2	P56282	527 aa		18.25	■□□□□ 0.51
CIRBP-238	ENST00000592412	SQSTM1	Q13501	440 aa		18.25	■□□□□ 0.51
CIRBP-238	ENST00000592412	RFTN1	Q14699	578 aa	Predicted RBP	18.25	■□□□□ 0.51
CIRBP-238	ENST00000592412	DCUN1D2	Q6PH85	259 aa		18.25	■□□□□ 0.51
CIRBP-238	ENST00000592412	PGBD5	Q8N414	524 aa		18.25	■□□□□ 0.51
CIRBP-238	ENST00000592412	OR4D9	Q8NGE8	314 aa		18.25	■□□□□ 0.51
CIRBP-238	ENST00000592412	ZNF564	Q8TBZ8	553 aa	Predicted RBP	18.25	■□□□□ 0.51
CIRBP-238	ENST00000592412	ART4	Q93070	314 aa		18.25	■□□□□ 0.51
CIRBP-238	ENST00000592412	SYT11	Q9BT88	431 aa		18.25	■□□□□ 0.51
CIRBP-238	ENST00000592412	TRIM7	Q9C029	511 aa		18.25	■□□□□ 0.51
CIRBP-238	ENST00000592412	CDH19	Q9H159	772 aa		18.25	■□□□□ 0.51
CIRBP-238	ENST00000592412	NUP62CL	Q9H1M0	184 aa		18.25	■□□□□ 0.51
CIRBP-238	ENST00000592412	PHPT1	Q9NRX4	125 aa	Predicted RBP	18.25	■□□□□ 0.51
CIRBP-238	ENST00000592412	OCIAD1	Q9NX40	245 aa		18.25	■□□□□ 0.51
CIRBP-238	ENST00000592412	SLC17A4	Q9Y2C5	497 aa		18.25	■□□□□ 0.51
CIRBP-238	ENST00000592412		A0A0U1RQS6	177 aa		18.24	■□□□□ 0.51
CIRBP-238	ENST00000592412	ATMIN	O43313	823 aa	Predicted RBP	18.24	■□□□□ 0.51
CIRBP-238	ENST00000592412	SOD1	P00441	154 aa		18.24	■□□□□ 0.51
CIRBP-238	ENST00000592412	VIPR1	P32241	457 aa		18.24	■□□□□ 0.51
CIRBP-238	ENST00000592412	ADCY8	P40145	1251 aa		18.24	■□□□□ 0.51
CIRBP-238	ENST00000592412	ATP1A2	P50993	1020 aa		18.24	■□□□□ 0.51
CIRBP-238	ENST00000592412	COPB1	P53618	953 aa	Known RBP	18.24	■□□□□ 0.51
CIRBP-238	ENST00000592412	KCNAB2	Q13303	367 aa		18.24	■□□□□ 0.51
CIRBP-238	ENST00000592412	MAMLD1	Q13495	774 aa		18.24	■□□□□ 0.51
CIRBP-238	ENST00000592412	TRA2A	Q13595	282 aa	Known RBP eCLIP	18.24	■□□□□ 0.51
CIRBP-238	ENST00000592412	LBR	Q14739	615 aa	Known RBP	18.24	■□□□□ 0.51
CIRBP-238	ENST00000592412	SKIDA1	Q1XH10	827 aa		18.24	■□□□□ 0.51
CIRBP-238	ENST00000592412	FKBP15	Q5T1M5	1219 aa		18.24	■□□□□ 0.51
CIRBP-238	ENST00000592412	ERMARD	Q5T6L9	678 aa		18.24	■□□□□ 0.51
CIRBP-238	ENST00000592412	DENND2C	Q68D51	928 aa		18.24	■□□□□ 0.51
CIRBP-238	ENST00000592412	ACAD10	Q6JQN1	1059 aa		18.24	■□□□□ 0.51
CIRBP-238	ENST00000592412	BMPER	Q8N8U9	685 aa		18.24	■□□□□ 0.51
CIRBP-238	ENST00000592412	SCARF2	Q96GP6	870 aa	Predicted RBP	18.24	■□□□□ 0.51
CIRBP-238	ENST00000592412	DDA1	Q9BW61	102 aa		18.24	■□□□□ 0.51
CIRBP-238	ENST00000592412	SPRY4	Q9C004	299 aa		18.24	■□□□□ 0.51
CIRBP-238	ENST00000592412	SEPT3	Q9UH03	358 aa		18.24	■□□□□ 0.51
CIRBP-238	ENST00000592412	PCSK1N	Q9UHG2	260 aa		18.24	■□□□□ 0.51
CIRBP-238	ENST00000592412	NPIPB15	A6NHN6	443 aa	Predicted RBP	18.23	■□□□□ 0.51
CIRBP-238	ENST00000592412	EIF3CL	B5ME19	914 aa	Known RBP	18.23	■□□□□ 0.51
CIRBP-238	ENST00000592412	SOCS5	O75159	536 aa		18.23	■□□□□ 0.51
CIRBP-238	ENST00000592412	IVL	P07476	585 aa		18.23	■□□□□ 0.51
CIRBP-238	ENST00000592412	TNFAIP3	P21580	790 aa		18.23	■□□□□ 0.51
CIRBP-238	ENST00000592412	PSMA2	P25787	234 aa		18.23	■□□□□ 0.51
CIRBP-238	ENST00000592412	TRAF2	Q12933	501 aa		18.23	■□□□□ 0.51
CIRBP-238	ENST00000592412	DPYS	Q14117	519 aa		18.23	■□□□□ 0.51
CIRBP-238	ENST00000592412	TMCO4	Q5TGY1	634 aa		18.23	■□□□□ 0.51
CIRBP-238	ENST00000592412	RFLNA	Q6ZTI6	216 aa		18.23	■□□□□ 0.51
CIRBP-238	ENST00000592412		Q6ZVL8	140 aa		18.23	■□□□□ 0.51
CIRBP-238	ENST00000592412	TSPAN33	Q86UF1	283 aa		18.23	■□□□□ 0.51
CIRBP-238	ENST00000592412	IL22RA1	Q8N6P7	574 aa		18.23	■□□□□ 0.51
CIRBP-238	ENST00000592412	PAF1	Q8N7H5	531 aa		18.23	■□□□□ 0.51
CIRBP-238	ENST00000592412	AGBL5	Q8NDL9	886 aa		18.23	■□□□□ 0.51
CIRBP-238	ENST00000592412	NEK11	Q8NG66	645 aa		18.23	■□□□□ 0.51
CIRBP-238	ENST00000592412	EIF3C	Q99613	913 aa	Known RBP	18.23	■□□□□ 0.51
CIRBP-238	ENST00000592412	FANCL	Q9NW38	375 aa		18.23	■□□□□ 0.51
CIRBP-238	ENST00000592412	CWC15	Q9P013	229 aa	Known RBP	18.23	■□□□□ 0.51
CIRBP-238	ENST00000592412	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	18.22	■□□□□ 0.51
CIRBP-238	ENST00000592412	DAPK3	O43293	454 aa		18.22	■□□□□ 0.51
CIRBP-238	ENST00000592412	RAD1	O60671	282 aa		18.22	■□□□□ 0.51
CIRBP-238	ENST00000592412	CP	P00450	1065 aa		18.22	■□□□□ 0.51
CIRBP-238	ENST00000592412	TEAD1	P28347	426 aa		18.22	■□□□□ 0.51
CIRBP-238	ENST00000592412	PPP6R3	Q5H9R7	873 aa	Predicted RBP	18.22	■□□□□ 0.51
CIRBP-238	ENST00000592412	PLEKHA7	Q6IQ23	1121 aa		18.22	■□□□□ 0.51
CIRBP-238	ENST00000592412	TECPR1	Q7Z6L1	1165 aa		18.22	■□□□□ 0.51
CIRBP-238	ENST00000592412	ZNF761	Q86XN6	746 aa	Predicted RBP	18.22	■□□□□ 0.51
CIRBP-238	ENST00000592412	CACNA2D3	Q8IZS8	1091 aa		18.22	■□□□□ 0.51
CIRBP-238	ENST00000592412	PDCD6IP	Q8WUM4	868 aa	Known RBP	18.22	■□□□□ 0.51
CIRBP-238	ENST00000592412	ZNF599	Q96NL3	588 aa		18.22	■□□□□ 0.51
CIRBP-238	ENST00000592412	MCCC1	Q96RQ3	725 aa	Predicted RBP	18.22	■□□□□ 0.51
CIRBP-238	ENST00000592412	NOD2	Q9HC29	1040 aa		18.22	■□□□□ 0.51
CIRBP-238	ENST00000592412	ETNK2	Q9NVF9	386 aa		18.22	■□□□□ 0.51
CIRBP-238	ENST00000592412	SLC39A1	Q9NY26	324 aa		18.22	■□□□□ 0.51
CIRBP-238	ENST00000592412	PDP2	Q9P2J9	529 aa		18.22	■□□□□ 0.51
CIRBP-238	ENST00000592412	ANKMY1	Q9P2S6	941 aa		18.22	■□□□□ 0.51
CIRBP-238	ENST00000592412	TUBD1	Q9UJT1	453 aa		18.22	■□□□□ 0.51
CIRBP-238	ENST00000592412	PILRA	Q9UKJ1	303 aa		18.22	■□□□□ 0.51
CIRBP-238	ENST00000592412	SPTAN1	Q13813	2472 aa	Known RBP	18.22	■□□□□ 0.51
CIRBP-238	ENST00000592412	CLEC18A	A5D8T8	446 aa		18.21	■□□□□ 0.51
CIRBP-238	ENST00000592412	LGALS16	A8MUM7	142 aa		18.21	■□□□□ 0.51
CIRBP-238	ENST00000592412		B4E171	279 aa		18.21	■□□□□ 0.51
CIRBP-238	ENST00000592412	DUX1	O43812	170 aa		18.21	■□□□□ 0.51
CIRBP-238	ENST00000592412	EML2	O95834	649 aa		18.21	■□□□□ 0.51
CIRBP-238	ENST00000592412	MIP	P30301	263 aa		18.21	■□□□□ 0.51
CIRBP-238	ENST00000592412	CSTF2	P33240	577 aa	Known RBP eCLIP	18.21	■□□□□ 0.51
CIRBP-238	ENST00000592412	TSPAN7	P41732	249 aa		18.21	■□□□□ 0.51
CIRBP-238	ENST00000592412	ACTR1B	P42025	376 aa		18.21	■□□□□ 0.51
CIRBP-238	ENST00000592412	RENBP	P51606	427 aa		18.21	■□□□□ 0.51
CIRBP-238	ENST00000592412	ACTR1A	P61163	376 aa		18.21	■□□□□ 0.51
CIRBP-238	ENST00000592412	FOXK1	P85037	733 aa		18.21	■□□□□ 0.51
CIRBP-238	ENST00000592412	ANKS6	Q68DC2	871 aa		18.21	■□□□□ 0.51
CIRBP-238	ENST00000592412	RAET1G	Q6H3X3	334 aa		18.21	■□□□□ 0.51
CIRBP-238	ENST00000592412	DOK6	Q6PKX4	331 aa		18.21	■□□□□ 0.51

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