RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 TCF7L2Q9NQB0 619 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 HIF1ANQ9NWT6 349 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 PPP1R14DQ9NXH3 145 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 PLK2Q9NYY3 685 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 AIPL1Q9NZN9 384 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 SPATA7Q9P0W8 599 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.58□□□□□ -1.84
VMP1-212ENST00000591782 MTUS1Q9ULD2 1270 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 TRAF3IP3Q9Y228 551 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 WDR37Q9Y2I8 494 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 N6AMT1Q9Y5N5 214 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 SNX5Q9Y5X3 404 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 EVC2Q86UK5 1308 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 KDRP35968 1356 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 SYNJ2O15056 1496 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 HECW2Q9P2P5 1572 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 A0A0U1RQF3 1178 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 GOLGA6L4A6NEF3 574 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 C2orf81A6NN90 581 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 HNRNPCL2B2RXH8 293 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 NDC80O14777 642 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 POLR3GO15318 223 aaPredicted RBP3.57□□□□□ -1.84
VMP1-212ENST00000591782 SPAG9O60271 1321 aaKnown RBP3.57□□□□□ -1.84
VMP1-212ENST00000591782 NEMFO60524 1076 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 HNRNPCL1O60812 293 aaKnown RBP3.57□□□□□ -1.84
VMP1-212ENST00000591782 ZBED4O75132 1171 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 RGS11O94810 467 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 BAG2O95816 211 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 HEXAP06865 529 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 CBSLP0DN79 551 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 PCNAP12004 261 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 KRT13P13646 458 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 COX7A2P14406 83 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 MYF6P23409 242 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 CBSP35520 551 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 DDIT3P35638 169 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 MLH1P40692 756 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 CDKN2AP42771 156 aaKnown RBP3.57□□□□□ -1.84
VMP1-212ENST00000591782 PCYT1AP49585 367 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 THBS3P49746 956 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 NUDT6P53370 316 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 ARPC4P59998 168 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 UBXN2AP68543 259 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 CBX1P83916 185 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 PLIN5Q00G26 463 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 MECOMQ03112 1051 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 KIF5AQ12840 1032 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 PTP4A2Q12974 167 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 GRIK3Q13003 919 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 SPATA1Q5VX52 437 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 ACAD10Q6JQN1 1059 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 KRTAP5-3Q6L8H2 238 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 GBP6Q6ZN66 633 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 SNX32Q86XE0 403 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 ZDHHC17Q8IUH5 632 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 ITPRIPQ8IWB1 547 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 SFTPA2Q8IWL1 248 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 TEX11Q8IYF3 940 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 FBXL14Q8N1E6 418 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 LRRC43Q8N309 656 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 PARP16Q8N5Y8 322 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 TSPYL6Q8N831 410 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 NEXN-AS1Q8NBZ9 246 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 GJC3Q8NFK1 279 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 CCDC110Q8TBZ0 833 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 CTNNBL1Q8WYA6 563 aaPredicted RBP3.57□□□□□ -1.84
VMP1-212ENST00000591782 KLHL29Q96CT2 875 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 ZC3HAV1LQ96H79 300 aaKnown RBP3.57□□□□□ -1.84
VMP1-212ENST00000591782 PPM1MQ96MI6 270 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 PREBQ9HCU5 417 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 BAZ1AQ9NRL2 1556 aaPredicted RBP3.57□□□□□ -1.84
VMP1-212ENST00000591782 UBAP1Q9NZ09 502 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 KCND2Q9NZV8 630 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 CHMP5Q9NZZ3 219 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 IBTKQ9P2D0 1353 aaPredicted RBP3.57□□□□□ -1.84
VMP1-212ENST00000591782 EPS15L1Q9UBC2 864 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 IL36RNQ9UBH0 155 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 GTF3C4Q9UKN8 822 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 SARDHQ9UL12 918 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 SATB2Q9UPW6 733 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 CAMK2AQ9UQM7 478 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 NAALADL1Q9UQQ1 740 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.57□□□□□ -1.845e-7■■■■■ 27.4
VMP1-212ENST00000591782 TMEM98Q9Y2Y6 226 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 A3GALT2U3KPV4 340 aa3.57□□□□□ -1.84
VMP1-212ENST00000591782 PTPRGP23470 1445 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 MAPK8IP3Q9UPT6 1336 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 FAM90A8PA6NJQ4 464 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 J3KR12 359 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 TIMM23O14925 209 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 ASAP2O43150 1006 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 SMAD6O43541 496 aaKnown RBP3.56□□□□□ -1.84
VMP1-212ENST00000591782 TNFSF14O43557 240 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 KLK8O60259 260 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 BBOX1O75936 387 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 NEBLO76041 1014 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 REC8O95072 547 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 HOXC6P09630 235 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 RHOXF2BP0C7M4 288 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 FAM90A13PP0C7W8 464 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms