RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 CLDN7O95471 211 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 C1SP09871 688 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 CCDC175P0C221 793 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 TSHRP16473 764 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 CKMT2P17540 419 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 NFKB1P19838 968 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 RBL1P28749 1068 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 BLKP51451 505 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 HK3P52790 923 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 STC1P52823 247 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 KIAA1024LP59773 190 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 EIF3EP60228 445 aaKnown RBP9.18□□□□□ -0.94
DNMT1-223ENST00000591239 SRP54P61011 504 aaKnown RBP9.18□□□□□ -0.94
DNMT1-223ENST00000591239 CCZ1BP86790 482 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 CCZ1P86791 482 aaPredicted RBP9.18□□□□□ -0.94
DNMT1-223ENST00000591239 CDK18Q07002 472 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 DPTQ07507 201 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 C1orf61Q13536 156 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 GALNT3Q14435 633 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 PCSK7Q16549 785 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 ALG11Q2TAA5 492 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 PROX2Q3B8N5 592 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 CCDC157Q569K6 752 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 ZNF662Q6ZS27 426 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 RFLNAQ6ZTI6 216 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 PID1Q7Z2X4 250 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 HID1Q8IV36 788 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 ZNF567Q8N184 647 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 OR56A4Q8NGH8 313 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 ATL2Q8NHH9 583 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 TBATAQ96M53 351 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 WDR92Q96MX6 357 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 LYSMD1Q96S90 227 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 FAM118BQ9BPY3 351 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 FERMT1Q9BQL6 677 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 LRRC61Q9BV99 259 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 DUSP23Q9BVJ7 150 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 LGR4Q9BXB1 951 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 TEX101Q9BY14 249 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 ABCG8Q9H221 673 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 C10orf88Q9H8K7 445 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 KLHL8Q9P2G9 620 aaPredicted RBP9.18□□□□□ -0.94
DNMT1-223ENST00000591239 SPASTQ9UBP0 616 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 KLQ9UEF7 1012 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 KLK13Q9UKR3 277 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 TRHDEQ9UKU6 1024 aa9.18□□□□□ -0.94
DNMT1-223ENST00000591239 ACACBO00763 2458 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 GOLGA6CA6NDK9 693 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 GOLGA6BA6NDN3 693 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 LMO7DNF2Z398 122 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 F5H423 210 aaPredicted RBP9.17□□□□□ -0.94
DNMT1-223ENST00000591239 PDE2AO00408 941 aaPredicted RBP9.17□□□□□ -0.94
DNMT1-223ENST00000591239 TPP1O14773 563 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 TNFRSF10CO14798 259 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 NRDCO43847 1150 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 RASGRP1O95267 797 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 NDST3O95803 873 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 TNFP01375 233 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 PTMAP06454 111 aaKnown RBP9.17□□□□□ -0.94
DNMT1-223ENST00000591239 PIRTP0C851 137 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 GOLGA6DP0CG33 693 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 RBP3P10745 1247 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 MYCLP1P12525 358 aaPredicted RBP9.17□□□□□ -0.94
DNMT1-223ENST00000591239 CTSEP14091 401 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 KELP23276 732 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 ACP1P24666 158 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 ACADVLP49748 655 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 CDKN3Q16667 212 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 DEFB133Q30KQ1 61 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 KCTD16Q68DU8 428 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 RAET1GQ6H3X3 334 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 CCDC70Q6NSX1 233 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 DARS2Q6PI48 645 aaKnown RBP9.17□□□□□ -0.94
DNMT1-223ENST00000591239 NYAP1Q6ZVC0 841 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 ZNF765Q7L2R6 523 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 RD3Q7Z3Z2 195 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 NLRP8Q86W28 1048 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 HEATR4Q86WZ0 1026 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 CDKL3Q8IVW4 592 aaPredicted RBP9.17□□□□□ -0.94
DNMT1-223ENST00000591239 RAVER1Q8IY67 606 aaKnown RBP9.17□□□□□ -0.94
DNMT1-223ENST00000591239 NRSN1Q8IZ57 195 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 FAM181AQ8N9Y4 354 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 CCHCR1Q8TD31 782 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 UBE2Q2Q8WVN8 375 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 OR1E3Q8WZA6 343 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 SCAMP4Q969E2 229 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 AP2M1Q96CW1 435 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 PDXPQ96GD0 296 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 APOLD1Q96LR9 279 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 FCRL5Q96RD9 977 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 CLPBQ9H078 707 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 MAGEE1Q9HCI5 957 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 FGF22Q9HCT0 170 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 LZTFL1Q9NQ48 299 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 PHPT1Q9NRX4 125 aaPredicted RBP9.17□□□□□ -0.94
DNMT1-223ENST00000591239 GOLGA6AQ9NYA3 693 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 FAM153AQ9UHL3 310 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 CD84Q9UIB8 345 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 NEUROG3Q9Y4Z2 214 aa9.17□□□□□ -0.94
DNMT1-223ENST00000591239 PCDHGA1Q9Y5H4 931 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms