RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 FOCADQ5VW36 1801 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 hCG_2039718K7EN88 272 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 CPNE3O75131 537 aaKnown RBP15.19■□□□□ 0.02
CIRBP-228ENST00000590347 CYP7B1O75881 506 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 CNTFP26441 200 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 ILF2Q12905 390 aaKnown RBP15.19■□□□□ 0.02
CIRBP-228ENST00000590347 TAZQ16635 292 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 SOWAHCQ53LP3 525 aaPredicted RBP15.19■□□□□ 0.02
CIRBP-228ENST00000590347 RBM23Q86U06 439 aaKnown RBP15.19■□□□□ 0.02
CIRBP-228ENST00000590347 ZNF280CQ8ND82 737 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 RDH11Q8TC12 318 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 SPPL2BQ8TCT7 592 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 SNRNP25Q9BV90 132 aaKnown RBP15.19■□□□□ 0.02
CIRBP-228ENST00000590347 DSN1Q9H410 356 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 RUBCNLQ9H714 662 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 CMTM6Q9NX76 183 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 MAU2Q9Y6X3 613 aa15.19■□□□□ 0.02
CIRBP-228ENST00000590347 PSME4Q14997 1843 aa15.18■□□□□ 0.02
CIRBP-228ENST00000590347 PTPRFP10586 1907 aa15.18■□□□□ 0.02
CIRBP-228ENST00000590347 A0A1W2PQ72 361 aa15.18■□□□□ 0.02
CIRBP-228ENST00000590347 SCO2O43819 266 aa15.18■□□□□ 0.02
CIRBP-228ENST00000590347 NPM3O75607 178 aaKnown RBP15.18■□□□□ 0.02
CIRBP-228ENST00000590347 KCNA5P22460 613 aa15.18■□□□□ 0.02
CIRBP-228ENST00000590347 CYP2F1P24903 491 aa15.18■□□□□ 0.02
CIRBP-228ENST00000590347 FMO3P31513 532 aa15.18■□□□□ 0.02
CIRBP-228ENST00000590347 SNRPD2P62316 118 aaKnown RBP15.18■□□□□ 0.02
CIRBP-228ENST00000590347 LAPTM4AQ15012 233 aa15.18■□□□□ 0.02
CIRBP-228ENST00000590347 HIST2H2ACQ16777 129 aaPredicted RBP15.18■□□□□ 0.02
CIRBP-228ENST00000590347 STRADAQ7RTN6 431 aa15.18■□□□□ 0.02
CIRBP-228ENST00000590347 SDR16C5Q8N3Y7 309 aa15.18■□□□□ 0.02
CIRBP-228ENST00000590347 NSUN6Q8TEA1 469 aaKnown RBP15.18■□□□□ 0.02
CIRBP-228ENST00000590347 NUDT8Q8WV74 236 aa15.18■□□□□ 0.02
CIRBP-228ENST00000590347 APBB2Q92870 758 aa15.18■□□□□ 0.02
CIRBP-228ENST00000590347 RBBP8Q99708 897 aa15.18■□□□□ 0.02
CIRBP-228ENST00000590347 NARFLQ9H6Q4 476 aa15.18■□□□□ 0.02
CIRBP-228ENST00000590347 MOV10Q9HCE1 1003 aaKnown RBP15.18■□□□□ 0.02
CIRBP-228ENST00000590347 RPRD1BQ9NQG5 326 aaKnown RBP15.18■□□□□ 0.02
CIRBP-228ENST00000590347 TOR4AQ9NXH8 423 aa15.18■□□□□ 0.02
CIRBP-228ENST00000590347 SEPT9Q9UHD8 586 aaPredicted RBP15.18■□□□□ 0.02
CIRBP-228ENST00000590347 CTDP1Q9Y5B0 961 aaPredicted RBP15.18■□□□□ 0.02
CIRBP-228ENST00000590347 U3KQV3 271 aa15.18■□□□□ 0.02
CIRBP-228ENST00000590347 TSPAN9O75954 239 aa15.18■□□□□ 0.02
CIRBP-228ENST00000590347 EIF2S1P05198 315 aaKnown RBP15.18■□□□□ 0.02
CIRBP-228ENST00000590347 CYP4B1P13584 511 aa15.18■□□□□ 0.02
CIRBP-228ENST00000590347 SPRP35270 261 aaPredicted RBP15.18■□□□□ 0.02
CIRBP-228ENST00000590347 ACADSBP45954 432 aa15.18■□□□□ 0.02
CIRBP-228ENST00000590347 MPP1Q00013 466 aa15.18■□□□□ 0.02
CIRBP-228ENST00000590347 SYT16Q17RD7 645 aa15.18■□□□□ 0.02
CIRBP-228ENST00000590347 CDONQ4KMG0 1287 aa15.18■□□□□ 0.02
CIRBP-228ENST00000590347 MCFD2Q8NI22 146 aa15.18■□□□□ 0.02
CIRBP-228ENST00000590347 FAR1Q8WVX9 515 aa15.18■□□□□ 0.02
CIRBP-228ENST00000590347 VPS39Q96JC1 886 aa15.18■□□□□ 0.02
CIRBP-228ENST00000590347 SLC30A3Q99726 388 aa15.18■□□□□ 0.02
CIRBP-228ENST00000590347 POLR3FQ9H1D9 316 aaPredicted RBP15.18■□□□□ 0.02
CIRBP-228ENST00000590347 POMKQ9H5K3 350 aa15.18■□□□□ 0.02
CIRBP-228ENST00000590347 SLAMF8Q9P0V8 285 aa15.18■□□□□ 0.02
CIRBP-228ENST00000590347 GABBR1Q9UBS5 961 aa15.18■□□□□ 0.02
CIRBP-228ENST00000590347 FADS2O95864 444 aaKnown RBP15.17■□□□□ 0.02
CIRBP-228ENST00000590347 CHRNEQ04844 493 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 STXBP5Q5T5C0 1151 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 NAPEPLDQ6IQ20 393 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 FUNDC1Q8IVP5 155 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 UBE2J2Q8N2K1 259 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 NLGN2Q8NFZ4 835 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 OR10Q1Q8NGQ4 319 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 BRSK1Q8TDC3 778 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 LRRC39Q96DD0 335 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 FYTTD1Q96QD9 318 aaKnown RBP15.17■□□□□ 0.02
CIRBP-228ENST00000590347 RNF167Q9H6Y7 350 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 ENTPD7Q9NQZ7 604 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 TRMT13Q9NUP7 481 aaKnown RBP15.17■□□□□ 0.02
CIRBP-228ENST00000590347 ARMC1Q9NVT9 282 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 VWA7Q9Y334 891 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 A0A0G2JMP0 313 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 LDLRP01130 860 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 RBP1P09455 135 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 EIF2DP41214 584 aaKnown RBP15.17■□□□□ 0.02
CIRBP-228ENST00000590347 ARCN1P48444 511 aaKnown RBP15.17■□□□□ 0.02
CIRBP-228ENST00000590347 MTMR1Q13613 665 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 DGUOKQ16854 277 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 B3GNT9Q6UX72 402 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 GDPD3Q7L5L3 318 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 PLD3Q8IV08 490 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 TXNDC5Q8NBS9 432 aaKnown RBP15.17■□□□□ 0.02
CIRBP-228ENST00000590347 BHMTQ93088 406 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 C3orf30Q96M34 536 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 NEDD4LQ96PU5 975 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 SATB2Q9UPW6 733 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 PDE10AQ9Y233 779 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 SLC12A8A0AV02 714 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 FAM172BPA6NC97 362 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 M0QX08 132 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 VWA5AO00534 786 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 TGM2P21980 687 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 CDH13P55290 713 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 ADARB1P78563 741 aaKnown RBP15.17■□□□□ 0.02
CIRBP-228ENST00000590347 CD47Q08722 323 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 CTBP1Q13363 440 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 SLC12A1Q13621 1099 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 GLRX5Q86SX6 157 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms