RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.39□□□□□ -1.07
DNMT1-219ENST00000589349 FAM172AQ8WUF8 416 aa8.39□□□□□ -1.07
DNMT1-219ENST00000589349 DNASE2BQ8WZ79 361 aa8.39□□□□□ -1.07
DNMT1-219ENST00000589349 PTPRN2Q92932 1015 aa8.39□□□□□ -1.07
DNMT1-219ENST00000589349 SERAC1Q96JX3 654 aa8.39□□□□□ -1.07
DNMT1-219ENST00000589349 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.39□□□□□ -1.07
DNMT1-219ENST00000589349 ZYG11BQ9C0D3 744 aa8.39□□□□□ -1.07
DNMT1-219ENST00000589349 IL21RQ9HBE5 538 aa8.39□□□□□ -1.07
DNMT1-219ENST00000589349 TM9SF3Q9HD45 589 aa8.39□□□□□ -1.07
DNMT1-219ENST00000589349 TMEM51Q9NW97 253 aa8.39□□□□□ -1.07
DNMT1-219ENST00000589349 ARHGEF38Q9NXL2 777 aa8.39□□□□□ -1.07
DNMT1-219ENST00000589349 SERGEFQ9UGK8 458 aa8.39□□□□□ -1.07
DNMT1-219ENST00000589349 DNAI1Q9UI46 699 aa8.39□□□□□ -1.07
DNMT1-219ENST00000589349 NOCTQ9UK39 431 aaKnown RBP8.39□□□□□ -1.07
DNMT1-219ENST00000589349 ANKRD6Q9Y2G4 727 aa8.39□□□□□ -1.07
DNMT1-219ENST00000589349 SIK3Q9Y2K2 1263 aa8.39□□□□□ -1.07
DNMT1-219ENST00000589349 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.39□□□□□ -1.07
DNMT1-219ENST00000589349 NUP205Q92621 2012 aa8.39□□□□□ -1.07
DNMT1-219ENST00000589349 A0A0D9SEW6 157 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 SYCE3A1L190 88 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 K7ERQ8 282 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 NEMP1O14524 444 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 DAPK3O43293 454 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 CREB3O43889 395 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 RTN2O75298 545 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 MT-CO1P00395 513 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 FAM153BP0C7A2 387 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 CHRNB2P17787 502 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 MMP8P22894 467 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 PMLP29590 882 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 JAM2P57087 298 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 GPR85P60893 370 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 CCDC15Q0P6D6 951 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 STAT4Q14765 748 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 TRIP6Q15654 476 aaKnown RBP8.38□□□□□ -1.07
DNMT1-219ENST00000589349 KIF19Q2TAC6 998 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 CCDC14Q49A88 953 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 PRAMEF14Q5SWL7 426 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 LCE3BQ5TA77 95 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 SFMBT2Q5VUG0 894 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 RETSATQ6NUM9 610 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 DPY19L2P1Q6NXN4 242 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 LEKR1Q6ZMV7 388 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 RBM43Q6ZSC3 357 aaKnown RBP8.38□□□□□ -1.07
DNMT1-219ENST00000589349 MAMDC2Q7Z304 686 aaPredicted RBP8.38□□□□□ -1.07
DNMT1-219ENST00000589349 NAXDQ8IW45 347 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 KDM1BQ8NB78 822 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 OR52K2Q8NGK3 314 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 JOSD2Q8TAC2 188 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 PIP4K2CQ8TBX8 421 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 KLK6Q92876 244 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 LMLNQ96KR4 655 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 MCEEQ96PE7 176 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 HAPLN3Q96S86 360 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 PCDHB18PQ96TA0 734 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 MYOCQ99972 504 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 PCED1AQ9H1Q7 454 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 ANLNQ9NQW6 1124 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 TM7SF3Q9NS93 570 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 OR12D3Q9UGF7 316 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 VPS51Q9UID3 782 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 DAAM1Q9Y4D1 1078 aa8.38□□□□□ -1.07
DNMT1-219ENST00000589349 SPTBN2O15020 2390 aa8.37□□□□□ -1.07
DNMT1-219ENST00000589349 BLACEA4D250 179 aa8.37□□□□□ -1.07
DNMT1-219ENST00000589349 AQP7O14520 342 aa8.37□□□□□ -1.07
DNMT1-219ENST00000589349 SLC31A1O15431 190 aa8.37□□□□□ -1.07
DNMT1-219ENST00000589349 TEX33O43247 280 aa8.37□□□□□ -1.07
DNMT1-219ENST00000589349 BUB1O43683 1085 aa8.37□□□□□ -1.07
DNMT1-219ENST00000589349 IGLV3-19P01714 112 aa8.37□□□□□ -1.07
DNMT1-219ENST00000589349 CYP1A1P04798 512 aaPredicted RBP8.37□□□□□ -1.07
DNMT1-219ENST00000589349 PLEKP08567 350 aaPredicted RBP8.37□□□□□ -1.07
DNMT1-219ENST00000589349 PSMA2P25787 234 aa8.37□□□□□ -1.07
DNMT1-219ENST00000589349 EPHB2P29323 1055 aa8.37□□□□□ -1.07
DNMT1-219ENST00000589349 CHRNA3P32297 505 aa8.37□□□□□ -1.07
DNMT1-219ENST00000589349 RFC1P35251 1148 aaPredicted RBP8.37□□□□□ -1.07
DNMT1-219ENST00000589349 ADRA1BP35368 520 aa8.37□□□□□ -1.07
DNMT1-219ENST00000589349 SSR1P43307 286 aaKnown RBP8.37□□□□□ -1.07
DNMT1-219ENST00000589349 PLK1P53350 603 aa8.37□□□□□ -1.07
DNMT1-219ENST00000589349 ADPRHP54922 357 aa8.37□□□□□ -1.07
DNMT1-219ENST00000589349 GNA12Q03113 381 aa8.37□□□□□ -1.07
DNMT1-219ENST00000589349 CNTN1Q12860 1018 aa8.37□□□□□ -1.07
DNMT1-219ENST00000589349 SEMA3BQ13214 749 aa8.37□□□□□ -1.07
DNMT1-219ENST00000589349 POLD3Q15054 466 aaPredicted RBP8.37□□□□□ -1.07
DNMT1-219ENST00000589349 ST3GAL2Q16842 350 aa8.37□□□□□ -1.07
DNMT1-219ENST00000589349 RAB6CQ53S08 254 aa8.37□□□□□ -1.07
DNMT1-219ENST00000589349 TDRD12Q587J7 1177 aaKnown RBP8.37□□□□□ -1.07
DNMT1-219ENST00000589349 FAM209AQ5JX71 171 aa8.37□□□□□ -1.07
DNMT1-219ENST00000589349 OTUD1Q5VV17 481 aaPredicted RBP8.37□□□□□ -1.07
DNMT1-219ENST00000589349 ACAD10Q6JQN1 1059 aa8.37□□□□□ -1.07
DNMT1-219ENST00000589349 WDR59Q6PJI9 974 aa8.37□□□□□ -1.07
DNMT1-219ENST00000589349 SLFN11Q7Z7L1 901 aa8.37□□□□□ -1.07
DNMT1-219ENST00000589349 SETD3Q86TU7 594 aaPredicted RBP8.37□□□□□ -1.07
DNMT1-219ENST00000589349 C1QL4Q86Z23 238 aa8.37□□□□□ -1.07
DNMT1-219ENST00000589349 SH2D3CQ8N5H7 860 aa8.37□□□□□ -1.07
DNMT1-219ENST00000589349 AADATQ8N5Z0 425 aa8.37□□□□□ -1.07
DNMT1-219ENST00000589349 PNPLA1Q8N8W4 532 aa8.37□□□□□ -1.07
DNMT1-219ENST00000589349 TBC1D31Q96DN5 1066 aa8.37□□□□□ -1.07
DNMT1-219ENST00000589349 PGAP3Q96FM1 320 aaPredicted RBP8.37□□□□□ -1.07
DNMT1-219ENST00000589349 MRFAP1L1Q96HT8 127 aa8.37□□□□□ -1.07
DNMT1-219ENST00000589349 PPP1R16AQ96I34 528 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms