RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 BBS2Q9BXC9 721 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 TNKS2Q9H2K2 1166 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 EPHX3Q9H6B9 360 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 ECT2Q9H8V3 914 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 PIDD1Q9HB75 910 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 ABCB8Q9NUT2 735 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 ZDHHC7Q9NXF8 308 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 HACD3Q9P035 362 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 CPSF2Q9P2I0 782 aaKnown RBP8.77□□□□□ -1.01
SMAD4-206ENST00000588860 MARCOQ9UEW3 520 aaPredicted RBP8.77□□□□□ -1.01
SMAD4-206ENST00000588860 DPP7Q9UHL4 492 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 EVLQ9UI08 416 aaPredicted RBP8.77□□□□□ -1.01
SMAD4-206ENST00000588860 ZFP69BQ9UJL9 534 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 SLC25A13Q9UJS0 675 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 INTS6Q9UL03 887 aaKnown RBP8.77□□□□□ -1.01
SMAD4-206ENST00000588860 SLC12A4Q9UP95 1085 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 ZNF711Q9Y462 761 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 PCDHB9Q9Y5E1 797 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 CAPN7Q9Y6W3 813 aa8.77□□□□□ -1.01
SMAD4-206ENST00000588860 LRRK1Q38SD2 2015 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 MYO9BQ13459 2157 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 TMEM114B3SHH9 223 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 STX7O15400 261 aaKnown RBP8.76□□□□□ -1.01
SMAD4-206ENST00000588860 TRIM13O60858 407 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 DNAJC8O75937 253 aaPredicted RBP8.76□□□□□ -1.01
SMAD4-206ENST00000588860 PGLSO95336 258 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 HSPA4LO95757 839 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 PENKP01210 267 aaPredicted RBP8.76□□□□□ -1.01
SMAD4-206ENST00000588860 POU2F2P09086 479 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 DLDP09622 509 aaKnown RBP8.76□□□□□ -1.01
SMAD4-206ENST00000588860 PRSS56P0CW18 603 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 MAGEA9P43362 315 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 CSNK1DP48730 415 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 STK19P49842 368 aaPredicted RBP8.76□□□□□ -1.01
SMAD4-206ENST00000588860 CDKN2DP55273 166 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 ERVK-21P61565 698 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 ZBTB16Q05516 673 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 BCL2L1Q07817 233 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 SLC20A2Q08357 652 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 ILF2Q12905 390 aaKnown RBP8.76□□□□□ -1.01
SMAD4-206ENST00000588860 CSHL1Q14406 222 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 PTPRRQ15256 657 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 KLC3Q6P597 504 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 C22orf39Q6P5X5 142 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 CAMK1DQ8IU85 385 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 SPATA6LQ8N4H0 392 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 TTC30BQ8N4P2 665 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 HEXDCQ8WVB3 486 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 SCG3Q8WXD2 468 aaKnown RBP8.76□□□□□ -1.01
SMAD4-206ENST00000588860 SMG7Q92540 1137 aaKnown RBP8.76□□□□□ -1.01
SMAD4-206ENST00000588860 IRF7Q92985 503 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 ZNF707Q96C28 371 aaPredicted RBP8.76□□□□□ -1.01
SMAD4-206ENST00000588860 NECAB3Q96P71 396 aaPredicted RBP8.76□□□□□ -1.01
SMAD4-206ENST00000588860 LRRC37BQ96QE4 947 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 GPR63Q9BZJ6 419 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 UNKQ9C0B0 810 aaKnown RBP8.76□□□□□ -1.01
SMAD4-206ENST00000588860 C20orf27Q9GZN8 174 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 ATP13A3Q9H7F0 1226 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 CERS4Q9HA82 394 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 KCNK13Q9HB14 408 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 GPAMQ9HCL2 828 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 BPIFA1Q9NP55 256 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 SPHK2Q9NRA0 654 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 IGSF5Q9NSI5 407 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 TXLNGQ9NUQ3 528 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 INTS10Q9NVR2 710 aaKnown RBP8.76□□□□□ -1.01
SMAD4-206ENST00000588860 KCNK4Q9NYG8 393 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 TBC1D14Q9P2M4 693 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 XPR1Q9UBH6 696 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 HEY2Q9UBP5 337 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 FKBPLQ9UIM3 349 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 CORO1CQ9ULV4 474 aaPredicted RBP8.76□□□□□ -1.01
SMAD4-206ENST00000588860 DNAJC16Q9Y2G8 782 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 FNDC3AQ9Y2H6 1198 aaKnown RBP8.76□□□□□ -1.01
SMAD4-206ENST00000588860 CRYL1Q9Y2S2 319 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 YBX2Q9Y2T7 364 aaKnown RBP8.76□□□□□ -1.01
SMAD4-206ENST00000588860 VWA7Q9Y334 891 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 MRPS23Q9Y3D9 190 aaKnown RBP8.76□□□□□ -1.01
SMAD4-206ENST00000588860 HCFC2Q9Y5Z7 792 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 WNT6Q9Y6F9 365 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 PLXNA2O75051 1894 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 DOCK8Q8NF50 2099 aa8.76□□□□□ -1.01
SMAD4-206ENST00000588860 TCF20Q9UGU0 1960 aaKnown RBP8.75□□□□□ -1.01
SMAD4-206ENST00000588860 UBA6A0AVT1 1052 aaPredicted RBP8.75□□□□□ -1.01
SMAD4-206ENST00000588860 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.75□□□□□ -1.01
SMAD4-206ENST00000588860 H0YHG0 523 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 FZD6O60353 706 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 SOCS5O75159 536 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 NDUFS3O75489 264 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 ALPIP09923 528 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 LTA4HP09960 611 aaKnown RBP8.75□□□□□ -1.01
SMAD4-206ENST00000588860 SBK3P0C264 359 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 CCDC166P0CW27 439 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 PABPC1P11940 636 aaKnown RBP8.75□□□□□ -1.01
SMAD4-206ENST00000588860 SRCP12931 536 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 TYRP14679 529 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 HOXB8P17481 243 aaPredicted RBP8.75□□□□□ -1.01
SMAD4-206ENST00000588860 FDXRP22570 491 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 PSMA3P25788 255 aa8.75□□□□□ -1.01
SMAD4-206ENST00000588860 SERPINA4P29622 427 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms