RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 SERAC1Q96JX3 654 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 BMFQ96LC9 184 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 SLC6A18Q96N87 628 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 LENG8Q96PV6 779 aaPredicted RBP10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 SRPK1Q96SB4 655 aaKnown RBP10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 AGAP2Q99490 1192 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 RAB17Q9H0T7 212 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 IRF2BPLQ9H1B7 796 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 MIR1-1HGQ9H1L0 117 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 SYBUQ9NX95 663 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 GRHL1Q9NZI5 618 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 HACD3Q9P035 362 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 IL17CQ9P0M4 197 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 WHRNQ9P202 907 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 ANAPC5Q9UJX4 755 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 PILRBQ9UKJ0 227 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 SMG5Q9UPR3 1016 aaKnown RBP10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 HCN4Q9Y3Q4 1203 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 POM121BA6NF01 834 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 K7ESM1 405 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 CCL22O00626 93 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 BANF1O75531 89 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 CRTAMO95727 393 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 WNT1P04628 370 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 PCCBP05166 539 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 RHOXF2BP0C7M4 288 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 MLNP12872 115 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 BPIP17213 487 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 LPOP22079 712 aaPredicted RBP10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 HNRNPA2B1P22626 353 aaKnown RBP10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 AKT2P31751 481 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 MAGEA3P43357 314 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 NPY2RP49146 381 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 ZNF140P52738 457 aaPredicted RBP10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 TMPRSS15P98073 1019 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 GUCY2DQ02846 1103 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 LRRC14Q15048 493 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 IRF4Q15306 451 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 MSS51Q4VC12 460 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 GLE1Q53GS7 698 aaKnown RBP10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 WDR45BQ5MNZ6 344 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 LAYNQ6UX15 382 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 ZDHHC24Q6UX98 284 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 GCNT7Q6ZNI0 430 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 CYP2U1Q7Z449 544 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 NRSN1Q8IZ57 195 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 ZCCHC9Q8N567 271 aaKnown RBP10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 OR4K2Q8NGD2 314 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 OR13C4Q8NGS5 318 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 SEC14L1Q92503 715 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 NUS1Q96E22 293 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 DNAJC1Q96KC8 554 aaKnown RBP10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 ZNF778Q96MU6 729 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 PHOX2BQ99453 314 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 RHOXF2Q9BQY4 288 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 RIOK2Q9BVS4 552 aaKnown RBP10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 EPB41L5Q9HCM4 733 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 TM9SF3Q9HD45 589 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 RRAGDQ9NQL2 400 aaPredicted RBP10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 PKD2L2Q9NZM6 624 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 BFARQ9NZS9 450 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 SLC2A6Q9UGQ3 507 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 DMTF1Q9Y222 760 aa10.68□□□□□ -0.7
SMARCA4-213ENST00000587988 CACNA1HO95180 2353 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 MROH6A6NGR9 719 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 C2orf81A6NN90 581 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 PRAMEF26H0Y7S4 382 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 BCAT2O15382 392 aaPredicted RBP10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 STX7O15400 261 aaKnown RBP10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 EPN2O95208 641 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 SOD1P00441 154 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 ADRA1DP25100 572 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 CA5AP35218 305 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 NUDT1P36639 197 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 DRG2P55039 364 aaKnown RBP10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 PLTPP55058 493 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 DHX9Q08211 1270 aaKnown RBP10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 INPP5AQ14642 412 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 CCDC6Q16204 474 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 PCID2Q5JVF3 399 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 TEX35Q5T0J7 233 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 HENMT1Q5T8I9 393 aaKnown RBP10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 PEAR1Q5VY43 1037 aaPredicted RBP10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 ALS2CLQ60I27 953 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 CES3Q6UWW8 571 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 SYT12Q8IV01 421 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 RAVER1Q8IY67 606 aaKnown RBP10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 BBOF1Q8ND07 529 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 DENND6BQ8NEG7 585 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 STYXQ8WUJ0 223 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 ART4Q93070 314 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 FUBP1Q96AE4 644 aaKnown RBP10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 AP2M1Q96CW1 435 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 LOXL4Q96JB6 756 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 SIGLEC10Q96LC7 697 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 RANBP9Q96S59 729 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 TRIM56Q9BRZ2 755 aaKnown RBP10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 IL22Q9GZX6 179 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 ARRDC1-AS1Q9H2J1 176 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 SEMA4AQ9H3S1 761 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms